Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi08g01024 ATGTCTTTGCTTCGACCTTACGGTAAGGTCGACGAAACCGACCAATTGAGGCTCGACGCTAGCCGGAGGACTCGGAAGAGGATTGCTGTCATTGTTTTGTCCTCTGTTGTTCTTGTTGGTGTTGTTGTTGCTGTCGTGTTTGGTACTAGAAATGCTTCCAATAACAATGATGACAGTAACAATCAAAGTGGTGCTCTTTCAACTTCAATCAAAGCAGTTTGTGATGTGACATTGTATCCTGTTACATGTCAAAATGCTTTTGGCCCTTTAGCTAACTCGAGCCACCTCGACCCCAGTCAGATATCCAAGCTTTCGGTTCAATTGGCGCTCGGTGAATTGTCGCGAGTTGCTGATTACATTTTTTATCATGCTATTACCAATTCAACTGACAATAAGACCATATTGGCTTTGAAAAATTGTCATGAACTTTTGGACTTAGCATTGGATCATTTGAATATCTCATTGTCTTCTAGTGATATTACATTGTTGAAAGCTGTGGATGATTTGAAAACATGGCTAACATCAGCTGCTACTTACCAACAGACTTGCATTGACGGTCTCACCGAAGTCGATCCGGCTTTGGCAAACCTCATTGCAAACTACTTGAAGAACTCCACTGAACTGACTAGTAATGGACTCGCCATCGTGTCATTCTTTTCGAAGCTTACGGATTCTTTAAGTCTACGACGATTGATGAGTTATGAAGATCACCAAAGCAATGGAGATTGGGCACGCCCGATACTCCGAAAGCTGGCTCAGAGAGATATCAGGAAGCAGGCTGACATTGTCGTAGCGAAAGACAGTTCGGGGAAGTACAAAACAATCACTGCAGCTCTCGAGGCTGTTCCTAATAAGAGCAAGAAGAGAACTGTGATTTATGTGAAGAAGGGAACTTACAAGGAGAATGTTGAAGTTGTGAAGAACAAATGGAATGTGGTAATTGTTGGTGATGGAATGACTGCAACCATAGTAACTGGCAGCCTTAATGTCATAGATGGGACACCAACATTTTCAACTGCAACATTTGCTGCAAAGGGAAAAGGGTTCATTGCCATAGATATGGGATTCAGGAACACTGCTGGACCGAACAAACACCAAGCGGTTGCTCTGATGTCGACATCCGACCAATCGATCTTCTACCGGTGCCAAATGGATGCATACCAAGACACTCTCTACTCACACTCCAACCGCCAATTCTACCGTGAATGCAAGGTCTACGGCACGGTCGATTTCATCTTTGGAAACTCAGCAGTAGTCCTACAAAACTGCACCATTGCACCCAGGTTGCCTCTTTTGGGCCAAAAGAACACAATCACTGCTCAAGGCAGGTTTGATCCTAATCAAAACACTGGCATTTCGATACAAGACTCGTCGATCCAACCATACGAGAACTTGAAAACTACAGAAACTTACCTCGGCCGTCCGTGGAAAAACTACTCAACGACCGTGTTTATGCAAAGTAATTTGGGGAGTTTGATTCACCCAAGTGGCTGGTTGCCTTGGGTTGGAACATCAGCACCAGACACCATATTCTATGCAGAGTTTCAAAACTATGGCCCTGGTTCTTCCACAGCTAAAAGAGTTAAGTGGACGGGTGTGAAGAACATTGACATTAAAACTGCAAAGAAGTTCACAGTTTCTTCCTTCATTGATGGTAAAGATTGGATCTCAAAGGCACAAGTTCCCTTCAAAGCTAGCATTTGA 1704 43.66 MSLLRPYGKVDETDQLRLDASRRTRKRIAVIVLSSVVLVGVVVAVVFGTRNASNNNDDSNNQSGALSTSIKAVCDVTLYPVTCQNAFGPLANSSHLDPSQISKLSVQLALGELSRVADYIFYHAITNSTDNKTILALKNCHELLDLALDHLNISLSSSDITLLKAVDDLKTWLTSAATYQQTCIDGLTEVDPALANLIANYLKNSTELTSNGLAIVSFFSKLTDSLSLRRLMSYEDHQSNGDWARPILRKLAQRDIRKQADIVVAKDSSGKYKTITAALEAVPNKSKKRTVIYVKKGTYKENVEVVKNKWNVVIVGDGMTATIVTGSLNVIDGTPTFSTATFAAKGKGFIAIDMGFRNTAGPNKHQAVALMSTSDQSIFYRCQMDAYQDTLYSHSNRQFYRECKVYGTVDFIFGNSAVVLQNCTIAPRLPLLGQKNTITAQGRFDPNQNTGISIQDSSIQPYENLKTTETYLGRPWKNYSTTVFMQSNLGSLIHPSGWLPWVGTSAPDTIFYAEFQNYGPGSSTAKRVKWTGVKNIDIKTAKKFTVSSFIDGKDWISKAQVPFKASI 567
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 33487966 33490094 - XM_039039682.1 Bhi08g01024 41357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi08g01024 567 Pfam Pectinesterase 261 552 IPR000070 GO:0030599|GO:0042545
Bhi08g01024 567 ProSitePatterns Pectinesterase signature 1. 286 305 IPR018040 -
Bhi08g01024 567 Gene3D - 256 567 IPR012334 -
Bhi08g01024 567 CDD PMEI-like_3 72 221 - -
Bhi08g01024 567 Pfam Plant invertase/pectin methylesterase inhibitor 69 215 IPR006501 GO:0004857
Bhi08g01024 567 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 24-RELATED 19 564 - -
Bhi08g01024 567 Gene3D Invertase/pectin methylesterase inhibitor family protein 67 219 IPR035513 -
Bhi08g01024 567 SUPERFAMILY Pectin lyase-like 259 564 IPR011050 -
Bhi08g01024 567 SMART PMEI_2 65 215 IPR006501 GO:0004857
Bhi08g01024 567 TIGRFAM PME_inhib: pectinesterase inhibitor domain 63 216 IPR006501 GO:0004857
Bhi08g01024 567 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 69 220 IPR035513 -
Bhi08g01024 567 PANTHER PECTINESTERASE 19 564 - -
Bhi08g01024 567 ProSitePatterns Pectinesterase signature 2. 405 414 IPR033131 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g02829 Bhi-Chr1:70226331 Bhi08g01024 Bhi-Chr8:33487966 1.43E-162 dispersed
Bhi08g01024 Bhi-Chr8:33487966 Bhi12g00634 Bhi-Chr12:19483377 2.94E-137 dispersed
Bhi08g01024 Bhi-Chr8:33487966 Bhi12g02036 Bhi-Chr12:63545398 3.45E-150 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi08g01024 - - csv:101210577 992.26