Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi08g01041 CCAACCAACCACTGCACTTTTCTTATTCATAAAGCATTTTTGGCAGATTCTCCCTTCACCACTTATTCATCACCTCAATCCTCCTCTCTTCTTCTTCACTCGCCTCTGTGTTGGCTCTGTTTCAGTCATCCATGGCGATGAAGATGGCCATCACAGCTTCCACCATTCCCAAACATCACCCACCTCCTTCTCTCCCTTCTTCCTCTCACAGATCCGATTCCAAGTCCCAATTCCGTCCCATCTCCGTTTCTTTACCGGCCTCCACTACCCTCTCTCTCTTAGCCCTCTTCTCTTCTCCCTACGACGCTAGGGCTCTCAACAAAGACCAAATCGTCTCTTCTCTCAATGAAGTGGAGAAGACGTTTGATCAGGTTCAAGAAATGGGTTCGAATTTCTTTGATATTGCGCAACAGGTCTTTGACTCTGCTACAAATGTTTTGAAACCGGGTGTTGATGCGGCGCTGCCGATTGTCAAGCAGGCTGGAGAAGAGGCGCTGAAAGTTGCTTCTCCAACGATTTCTGAGGCTTCAAAGAAAGCCCTAGAAGCACTTCAGGGCTCTGGCATTGACACCGAACCTGTTCTAAGTGCTGCTAAGACAGTAGTAGGTGCAGCACAACAAACAGGTAAGGTCATTGAAGGTGCCAAACCTATAGCATCATCGACCGTCGAGACGATCTCCACGGCCGACCCTCTTGTAATTGCAGAAATTGCTGGTATCTTAGCCTTGGCATACCTGCTCTTTCCTCCAATTTGGTCTGCCATCTCTTTCAACTTTCGCGGCTACAAAGGTGAACTCTCTCCTGCTCAAACACTTGATCTAATCTCGTCGAGCAATTACTTTCTGATTGATATACGATCCGAGAAGGACAAGGATAAGTCTGGCATTCCTCGCCTTCCTTCTAGTGCTAAGAACCAGTCAATTGCCATTCCTTTGGAAGAACTACCAAACAAGTTGCGGGGCATTGTCCGAAATGTAAAGAAACTAGAAGCTGAACTTTCAGCCATCAAGATTTCATATCTCAAGAAACTTAACAAAGGCTCCAATATAGTGATCTTGGGCTCGTACTCCGACTCAGCAAAAGCAGTTGCCAAAGCACTAACAAGCCTTGGCTTCAAGAACTCCTGGATCGTAACTGATGGGTTTTTAGGTAGCAAAGGTTGGTTACAGAGTCGGTTAGGGACAGATACATATAAGTTTTCATTCGCAGAGATCCTTTCGCCATCCCGAGTCATCCCGTCCGGAACCAAACGTTTTGGGACAACCTCACTGACATCTGCATCTGGTCAAAAATTGCTTCCTGGTACTGATTAAAGTTTTGGCTATTCATGCTGGTTGTCACACAGGTTTTCTGCCCACGTACCATAGGATCTGTAAATTATCCCCTATGATTCTTGATTTGATTGTCTTTGTATGTGGCCTCAATTACTGCTTGCGGGTTGTATAATGGTTAAAAAGGTAGAAATAGCATCATATTTAGATTCA 1484 45.49 MAMKMAITASTIPKHHPPPSLPSSSHRSDSKSQFRPISVSLPASTTLSLLALFSSPYDARALNKDQIVSSLNEVEKTFDQVQEMGSNFFDIAQQVFDSATNVLKPGVDAALPIVKQAGEEALKVASPTISEASKKALEALQGSGIDTEPVLSAAKTVVGAAQQTGKVIEGAKPIASSTVETISTADPLVIAEIAGILALAYLLFPPIWSAISFNFRGYKGELSPAQTLDLISSSNYFLIDIRSEKDKDKSGIPRLPSSAKNQSIAIPLEELPNKLRGIVRNVKKLEAELSAIKISYLKKLNKGSNIVILGSYSDSAKAVAKALTSLGFKNSWIVTDGFLGSKGWLQSRLGTDTYKFSFAEILSPSRVIPSGTKRFGTTSLTSASGQKLLPGTD 393
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 34079486 34082200 + XM_039040146.1 Bhi08g01041 41374

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi08g01041 393 Coils Coil 268 288 - -
Bhi08g01041 393 CDD RHOD 226 340 - -
Bhi08g01041 393 Gene3D - 219 358 IPR036873 -
Bhi08g01041 393 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 221 340 IPR036873 -
Bhi08g01041 393 ProSiteProfiles Rhodanese domain profile. 232 353 IPR001763 -
Bhi08g01041 393 MobiDBLite consensus disorder prediction 7 34 - -
Bhi08g01041 393 PANTHER CALCIUM SENSING RECEPTOR, CHLOROPLASTIC 5 391 - -
Bhi08g01041 393 SMART rhod_4 222 350 IPR001763 -
Bhi08g01041 393 PANTHER RHODANESE/CELL CYCLE CONTROL PHOSPHATASE SUPERFAMILY PROTEIN 5 391 IPR044690 GO:0009704|GO:0071277|GO:0090333
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi08g01041 - - - csv:101209180 670.233
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g00540 Bhi-Chr4:13190473 Bhi08g01041 Bhi-Chr8:34079486 3.85E-14 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g389 . . . . . . . . Cmo13g01091 . . . . . . . . . . . . . . . . . . . . . . . . . . Lsi02g00153 Csa01g00637 Chy12g01465 Cme12g01908 . . . Bda14g00903 . Bpe15g00555 . . Sed01g2262 . . Cma13g01050 . Car13g00883 . Cpe09g01146 . Bhi08g01041 Tan05g2307 Cmetu03g1392 Lac10g0201 Hepe07g2429 . . Cla04g01122 Cam04g1175 Cec01g1687 Cco01g1735 Clacu04g1203 Cmu04g1182 Cre01g1480 . . . .
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Bhi01g01642 . 59 376 Sulfurtransferasese/Rhodanese AT1G79230 76.1 4.0e-147 518.5
Bhi01g01642 . 59 323 Sulfurtransferasese/Rhodanese AT1G16460 73.2 2.4e-113 406.0
Bhi08g01041 . 35 311 Sulfurtransferasese/Rhodanese AT5G23060 63.0 1.2e-90 330.9
Bhi01g00461 . 1 442 Sulfurtransferasese/Rhodanese AT4G01050 52.3 2.5e-119 426.8
Bhi08g00711 . 6 610 Sulfurtransferasese/Rhodanese AT1G09280 63.6 5.1e-225 778.1
Bhi07g00442 . 81 430 Sulfurtransferasese/Rhodanese AT2G40760 76.3 9.2e-156 547.7
Bhi11g02969 . 79 427 Sulfurtransferasese/Rhodanese AT1G17850 67.8 6.4e-151 531.6
Bhi11g02968 . 79 439 Sulfurtransferasese/Rhodanese AT1G17850 65.4 3.3e-147 519.2
Bhi03g02658 . 31 236 Sulfurtransferasese/Rhodanese AT2G42220 73.8 1.9e-85 313.2
Bhi11g01834 . 35 215 Sulfurtransferasese/Rhodanese AT3G08920 63.0 1.6e-62 236.9
Bhi02g00594 . 1 292 Sulfurtransferasese/Rhodanese AT4G24750 67.5 1.0e-112 404.1
Bhi02g00593 . 1 218 Sulfurtransferasese/Rhodanese AT4G24750 63.8 5.2e-77 285.4
Bhi10g00246 . 67 292 Sulfurtransferasese/Rhodanese AT5G19370 65.6 9.1e-85 311.2
Bhi11g00590 . 113 464 Sulfurtransferasese/Rhodanese AT5G55130 72.4 3.3e-150 528.9
Bhi11g00589 . 113 464 Sulfurtransferasese/Rhodanese AT5G55130 72.4 3.3e-150 528.9
Bhi01g01519 . 57 237 Sulfurtransferasese/Rhodanese AT4G27700 80.1 3.3e-79 292.4
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0010320 1 1 1 0 1 1 1 1 1 1 1 1 2 1 1 2 1 2 1 1 1 1 1 1 1 1 1 1 1 1 32
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bhi08g01041 Bhi_Chr08 FPKM 88.118385 107.363625 11.168012 10.028817 26.136936 27.829315 26.846645 0.470629 0.120072 0.210843