Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi08g01059 AAACATCAATTTTTTTATTCACTCACTAAATTACACCTTTTTTTTTTTTTTCTTTTCTTCTTCTCCTCACTATTTCTTGAATGAAATAGAGAGGGTTTTTTTTTCCTTTTTTCTTTTTTTGGGGTGTGGGTTTGTAATTGAATTTTGTGAGGGGAAAAAAATGGGGAGAGGGAGAGTGCAATTGAAGAGGATAGAGAACAAAATTAATAGACAGGTGACTTTCTCAAAGAGAAGGTCTGGTTTATTGAAGAAAGCTCATGAAATTTCAGTTCTTTGTGATGCTGAAGTTGCTCTTATTGTCTTCTCCACAAAGGGGAAGCTCTTTGAATACTCAACTGATTCTTGCATGGAGAAAATCCTTGAGCGTTACGAAAGGTATTCATATGCAGAGAGGAGACTTGTTGCAAATGATAACCAATCAAATGGAAATTGGACTCTTGAACATGCAAAGCTTAAAGCCAGAATTGAGGTTTTACAGAAAAACCACAGGCATTTCATGGGGGAAGATCTTGACTCATTGAGTCTAAAAGAGCTTCAAAATATTGAGCAACAACTTGATTCTGCACTCAAGCATATAAGAGCTAGGAAGAACCAACTCATGCATGAATCCATTTCAGAGCTTCAGAAAAAGGACAAGGCACTACAGGAGCAAAATAACATGTTAGCCAAGAAGATAAAGGAGAAGGAGAAAGCACAAGCTCAAAATCCACAAATTGAGCAGCAGCAGAATAGCCATGTCATTGAATCTTCTCCACTTCTTCTACCTCAGCCATTCCAATCTCTTAACATGAGTTGTCTTTACCCAACACACGACACTGGGGACGACGACTCCGCCGCCAATCACGACAGATCCGGTGTCCTCCTCCCGCCGTGGATGCTCCGCCACCATCTTGGTGACTAAAGGGATAATATACATATATATATATATATGATGCAGACTTATAATTGTAAGCCCCCTGATGTATCATATATATAGTAGTGTAGTAGTAATAGTACCCTAAATTCTTTAGCTGTATGAACCCTTTTGGATAATGGATATATCCAATCCTCTGTGAAACTTTGTAGCTTTTAGTAAGTAATTCAGGAAAAAAAGGGTAAAATGGGTAAAGAAGCATGGAGGCTTATTATTGGTTAAAAAAATGATACATTTTATAGAGAATAAGGCTCTAAGTGACATGATTGTATATATTTTGTATAAATGGCAGCCATTTAACTTTAATTACTTCTCAAATTTA 1235 36.76 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMEKILERYERYSYAERRLVANDNQSNGNWTLEHAKLKARIEVLQKNHRHFMGEDLDSLSLKELQNIEQQLDSALKHIRARKNQLMHESISELQKKDKALQEQNNMLAKKIKEKEKAQAQNPQIEQQQNSHVIESSPLLLPQPFQSLNMSCLYPTHDTGDDDSAANHDRSGVLLPPWMLRHHLGD 246
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 34581833 34589273 - XM_039037631.1 Bhi08g01059 41392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi08g01059 246 ProSitePatterns MADS-box domain signature. 3 57 IPR002100 GO:0003677|GO:0046983
Bhi08g01059 246 ProSiteProfiles MADS-box domain profile. 1 61 IPR002100 GO:0003677|GO:0046983
Bhi08g01059 246 PANTHER AGAMOUS-LIKE MADS-BOX PROTEIN AGL8 HOMOLOG 1 216 - -
Bhi08g01059 246 CDD MADS_MEF2_like 2 76 IPR033896 GO:0000977|GO:0045944
Bhi08g01059 246 PANTHER SERUM RESPONSE FACTOR HOMOLOG 1 216 - -
Bhi08g01059 246 ProSiteProfiles K-box domain profile. 88 178 IPR002487 GO:0003700|GO:0005634|GO:0006355
Bhi08g01059 246 Pfam K-box region 85 172 IPR002487 GO:0003700|GO:0005634|GO:0006355
Bhi08g01059 246 Coils Coil 151 188 - -
Bhi08g01059 246 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 10 57 IPR002100 GO:0003677|GO:0046983
Bhi08g01059 246 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Bhi08g01059 246 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Bhi08g01059 246 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
Bhi08g01059 246 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
Bhi08g01059 246 SUPERFAMILY SRF-like 2 91 IPR036879 GO:0003677|GO:0046983
Bhi08g01059 246 Coils Coil 122 145 - -
Bhi08g01059 246 Gene3D - 13 86 IPR036879 GO:0003677|GO:0046983
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g01167 Bhi-Chr4:28326432 Bhi08g01059 Bhi-Chr8:34581833 6.23E-92 dispersed
Bhi08g01059 Bhi-Chr8:34581833 Bhi12g02451 Bhi-Chr12:77158681 3.00E-57 dispersed
Bhi08g01059 Bhi-Chr8:34581833 Bhi08g01062 Bhi-Chr8:34598902 1.35E-54 proximal
Bhi01g02244 Bhi-Chr1:53579786 Bhi08g01059 Bhi-Chr8:34581833 1.05E-88 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1677 PF01486 K-box 1.80E-30 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi08g01059 K09264 - csv:101207225 407.912