Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi08g01121 TAATAAACACCATATCTCATTCATATGGATCAAATACTTATCTTACTATATCTCCATTCTTGCTAAAATGGGGCAAAACAGAATCCAAGAGAATAAACAAAGGCTAAAAAAACTCTAGAGGAGACTTCAACTATCAGGAAAAGTCTGCAATCCAAAAGAATGATAATTGCTTTTCTTGAATATACTTAACACCATTCCCTCTGGGAGGGACAAGGAATAACTGCAAGTATACCTTTAGAAAGAGATATTCTTGCAATCTGCAATGTCTTCCTTCCCAAAACTTGGCTGACTGCTTTTGAGATTATGAAACAAAGAACTTCAAAAAGATGGCTTTTTGCCCAGATGGGTTTTCAAGGGGGAATGATGGGCATGTTCAAAACAGCCACTTCTCAATTAAGGCTCATTATCAAATTACCAATTGTGTTTATGTGTGGGGAAGAAGAAGATGAAGAAGAAGAATATGCCTTGTTTCTGAATGGAGTTGTGTGTAAAGAAGGCATTTCCTATGCTTCACAACTTCCTTGTATAGAGATACATATAAACTTCAGAAACAATTTCAAAAATTTGAAAGGCATCAAAATCAAACACTGTTCATTGTGAAACTCTGTTGAGAAAATTATAAGTCTAGAGAATTCAGCACATGGAAACTTTGATTAGTCAAAGAAGAGTGAGTTTTTCGGATTCAGGACAACATAAAAAGGATGCTTCCATCAAACGTAGAGATGGAATTCCACAGAAAAAAACAAGATCCTTCAAAGAGGATAAAAAGGAATCCAAGAAGTTAAAATGGTATTTTTCAAACCAAATGAATGAGGATTATGATTCAAGTGATATAGAGCTTGCCACTGCAGTAGCATCAGCTGCATTTGCAATTCGCTCTCAAGAAGAAACAGATTTACAATATCAGAAAAAGAAGAGGGAAAGCCTGGAAGCCTCAATATCAAAAGTTAAAAGCAGAAAAGATAACACACCTGCATTCGCTCCCAGCATAACAAAGCGATTGTCTAACAAGGAAACCACCAATCCTGGTCAATCTTCAATAAAGAAGCCAATGGAACAGGAAAAGAAGGAATCAATGACTGGAATTCCCATACCGCCACCGAGACGAAGCCTTGTACCAACTAGAGCAGATGTGTGGGAAAGAAATAAGATGGAGAAGATTAATAAAAGGTATCATAAGATAAAAGCTTCAATTCTTGTCTGGGAGAATGAGAGAAAAATGCGTGCGAAACTTCATATGGAAAAGAAAAAGGTTGAATTGGAGCACAAAAAGGCATTGTTTCTGCAATATTACCAGGACAACATAGCACGAATTGACCAGATTGCGGGGGGAGCAAGAGCACAGCTGGAAGAGAAGAGAAAAAGGGAAGAGAATAAAGCAAGAGAAACAGCAAACAGAATCAGATCAACTGGACGACTTCCTGTGACTTGTTTCTGTCTCCAGTATCACTAAGAATGAGATTTGGCCTTGTGAACACAGAAACATGAAATCAAACAACTCCTATTTACTTA 1512 37.1 METLISQRRVSFSDSGQHKKDASIKRRDGIPQKKTRSFKEDKKESKKLKWYFSNQMNEDYDSSDIELATAVASAAFAIRSQEETDLQYQKKKRESLEASISKVKSRKDNTPAFAPSITKRLSNKETTNPGQSSIKKPMEQEKKESMTGIPIPPPRRSLVPTRADVWERNKMEKINKRYHKIKASILVWENERKMRAKLHMEKKKVELEHKKALFLQYYQDNIARIDQIAGGARAQLEEKRKREENKARETANRIRSTGRLPVTCFCLQYH 270
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 35690025 35692255 - XM_039038007.1 Bhi08g01121 41454

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi08g01121 270 MobiDBLite consensus disorder prediction 119 158 - -
Bhi08g01121 270 MobiDBLite consensus disorder prediction 13 43 - -
Bhi08g01121 270 PANTHER OS02G0116800 PROTEIN 23 266 - -
Bhi08g01121 270 PANTHER GB|AAD39278.1 23 266 - -
Bhi08g01121 270 MobiDBLite consensus disorder prediction 1 43 - -
Bhi08g01121 270 Coils Coil 233 253 - -
Bhi08g01121 270 Pfam Remorin, C-terminal region 161 262 IPR005516 -
Bhi08g01121 270 MobiDBLite consensus disorder prediction 119 135 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi08g01121 - - - cmo:103490088 432.95
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi07g01515 Bhi-Chr7:43776579 Bhi08g01121 Bhi-Chr8:35690025 2.36E-14 dispersed
Bhi08g01121 Bhi-Chr8:35690025 Bhi01g00371 Bhi-Chr1:6476983 1.20E-08 dispersed
Bhi07g01514 Bhi-Chr7:43776421 Bhi08g01121 Bhi-Chr8:35690025 2.73E-17 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g622 . . . . Bpe12g00529 . . . Cmo13g00940 . . . . . . . . . . . . . . . . . . . . . . . . . . Lsi02g00101 Csa01g00580 Chy12g01516 Cme12g01962 . . . . . . . . Sed08g2099 . . Cma13g00913 . Car13g00753 . . . Bhi08g01121 Tan05g2402 Cmetu12g1770 . . . . Cla04g01173 Cam04g1230 Cec01g1741 Cco01g1787 Clacu04g1257 Cmu04g1236 Cre01g1531 . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007325 0 1 0 0 1 1 2 1 1 1 1 1 2 1 1 1 1 2 1 1 1 1 0 1 1 1 1 5 4 1 36
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bhi08g01121 Bhi_Chr08 FPKM 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0