Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi08g01127 CAGAACATCAATTATCTCTCTTAGCAATGGTTTCAGAGAGATCAATAATTGGTATAGAATCATTGAAGACAAAGAAGAAGGTATGTGTGATAGGAGCAGGTGCCTCAGGGCTTGTAGCAGCCAGAGAGCTAAGAAAAGAAGGTCACAAAGTAGTAATTTTGGAGCAAAACGACGACGTTGGAGGTCAATGGCTATACAACCCAAATGTTGAAAATGAACATCCTTTAGGAAAATCCAAATTCCTTAATGTTCATACCAGCATTTACTCCTCTTTAAGGCTTGCTTCTCCAAGGGAAATTATGGGCTTTTCTGATTTTCCTTTTGTTACTAAGAAAGGGCGTGACACTAGGAGATTTCCTGGCCATAATGAGCTGCTTTTGTATTTGAAGGATTTTTCTCAATACTTTGGTTTGAATCAACTCATAAGGTTTAATACTAGAGTTGAATATGTGGGGATTATGAACAACAAAAATGGCTGTTTTGGAGGGATTAAGGATGATCATCATCTTCAATGGGTTGTTAGAAGTAGAGATTATTGTAAGTATAAGATGGATAATATTCATGGGAATGATGATCGTGATTTGATTGAACAAGTTTTTGATGCTGTTGTTGTTGCTACTGGACATTATTCTCATCCTAGATTGCCTACCATTAAAGGAATGGACAAATGGAAGAGAAAGCAAATCCATAGTCATGTTTATAGGGTTCCTGACCCGTTTCGCAACGAGGTAGTGGTGGTGGTGGGAAACTCTCAAAGTGGGCAAGACATATCGTTAGATCTAATAGAAGTGGCAAAGGAAATTCATTTAAGCACAAAATCCATTAACACCATAACTCAGGGTTTATCAAAAGTCATCCAAAAATATGAAAACATGCATCTTGAACCACAGATCGAATTTCTTGAAGAAGATGGGCGAGTGGTGTTTGTTGATGGGACCTCTATAGTTGCTGATACTATTTTATATTGCACTGGGTATTCATACGCATTTCCATTTCTTGACACAAAAGGAATAGTTGTTGTGGATGATGATCGAGTGGGACCTTTGTACGAGCATACGTTTCCTCCGTCTTTGGCTCCCTCCCTTTCATTTATAGGCATTCCACGAAAGCTCATAGGTTTCCCTTTCTTTGAATCACAAGCAATATGGATAGCTCAACTGCTGTCTGGGAAAAGGACATTGCCATCATGTGATGATATGATGCAATCCATCAAAGAATTTTATCACTCAAAAGATATTGCTGGCATTCCAAAGCATAATACCCATGATTTAGCTGAGTTTGAGTATTGCGATAAGTATGGCGATAACGTTGGATATCCACGCTTGGAGGAATGGAGGAAAAAACTGTGCTTAACAACCATTGTAAATTCCTCAAACAACCTCGAAACGTTTCGAGATTCGATGGATGACGATGAGGATCTTCAAGAGGCCTATCAAAGCCCTCATTTCACTCAACTTGGAGCTCAAGTTTTTCCTCTGGTCCACATGTAAAAGCTTCGACAATCAGTTTCTTCTTTCTTATCTCCTTTTTCTTTTTGGGTGGCCATGTAAAATTCCACAAGCAGAGTACAGAAGCGCTATGAAAACAAAGAAGGCTTCAAACATCATTTCACCAATGTTGATGTATTTCATTTTTTGTTGTTCAAATTGTAGTGTCCCAAAATAATTTGTTCATTGTTGTTAATTAGTATTTGTTACACCATCAAGGTTTTTGTCTAGTTATAAATTTTAATGTTAAAGCTACTTTATGTATTTTTCCAATTTATTAAACTATGAAGAATTCACTTCTGCA 1791 37.41 MVSERSIIGIESLKTKKKVCVIGAGASGLVAARELRKEGHKVVILEQNDDVGGQWLYNPNVENEHPLGKSKFLNVHTSIYSSLRLASPREIMGFSDFPFVTKKGRDTRRFPGHNELLLYLKDFSQYFGLNQLIRFNTRVEYVGIMNNKNGCFGGIKDDHHLQWVVRSRDYCKYKMDNIHGNDDRDLIEQVFDAVVVATGHYSHPRLPTIKGMDKWKRKQIHSHVYRVPDPFRNEVVVVVGNSQSGQDISLDLIEVAKEIHLSTKSINTITQGLSKVIQKYENMHLEPQIEFLEEDGRVVFVDGTSIVADTILYCTGYSYAFPFLDTKGIVVVDDDRVGPLYEHTFPPSLAPSLSFIGIPRKLIGFPFFESQAIWIAQLLSGKRTLPSCDDMMQSIKEFYHSKDIAGIPKHNTHDLAEFEYCDKYGDNVGYPRLEEWRKKLCLTTIVNSSNNLETFRDSMDDDEDLQEAYQSPHFTQLGAQVFPLVHM 487
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 35876212 35879228 + XM_039039192.1 Bhi08g01127 41460

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi08g01127 487 SUPERFAMILY FAD/NAD(P)-binding domain 15 262 IPR036188 -
Bhi08g01127 487 Pfam Flavin-binding monooxygenase-like 16 268 IPR020946 GO:0004499|GO:0050660|GO:0050661
Bhi08g01127 487 Pfam Flavin-binding monooxygenase-like 285 402 IPR020946 GO:0004499|GO:0050660|GO:0050661
Bhi08g01127 487 SUPERFAMILY FAD/NAD(P)-binding domain 293 442 IPR036188 -
Bhi08g01127 487 PRINTS Flavin-containing monooxygenase (FMO) signature 17 33 IPR000960 GO:0050660|GO:0050661
Bhi08g01127 487 PRINTS Flavin-containing monooxygenase (FMO) signature 41 65 IPR000960 GO:0050660|GO:0050661
Bhi08g01127 487 PRINTS Flavin-containing monooxygenase (FMO) signature 301 328 IPR000960 GO:0050660|GO:0050661
Bhi08g01127 487 PRINTS Flavin-containing monooxygenase (FMO) signature 366 379 IPR000960 GO:0050660|GO:0050661
Bhi08g01127 487 PANTHER FLAVIN-CONTAINING MONOOXYGENASE FMO GS-OX-LIKE 8 13 478 - -
Bhi08g01127 487 PANTHER DIMETHYLANILINE MONOOXYGENASE 13 478 - -
Bhi08g01127 487 Gene3D - 208 314 IPR036188 -
Bhi08g01127 487 Coils Coil 486 487 - -
Bhi08g01127 487 Gene3D - 18 458 IPR036188 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi08g01127 - - - csv:101221607 820.076
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi08g01127 Bhi-Chr8:35876212 Bhi02g01743 Bhi-Chr2:48093093 5.17E-19 dispersed
Bhi08g01127 Bhi-Chr8:35876212 Bhi08g01128 Bhi-Chr8:35876212 0 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g609 Blo04g00784 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Lsi02g00096 . Chy12g01520 Cme12g01966 . . . Bda14g00865 . . Bma03g00842 . Sed08g2095 . . . . . . . . Bhi08g01127 Tan05g2408 Cmetu06g2174 . Hepe07g1737 . . Cla04g01176 Cam04g1233 Cec01g1744 Cco01g1790 Clacu04g1261 Cmu04g1240 Cre01g1534 . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0009615 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 3 1 1 1 1 1 1 1 1 1 1 1 1 33
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bhi08g01127 Bhi_Chr08 FPKM 6.860883 7.232381 12.914166 12.576605 16.554754 15.091188 14.839744 6.637109 7.051099 6.66173