Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi08g01139 CAATATCCCCTTTTACACTTTTTTCCCCATCTCTTCTCTCTCTTCTGCTTTTGCTTTTGCTATCGTGAGCTTCGTTTTTCATCAATCTCAGCCCTCCATCTGCCACATATTTTCGATCAGGCGGTGCATTTTAGCTCAGAAGCTGATCGAGCAAAGATATTTGTTTTTGCGAAAAGAAGAAAGAAAAAAAAAATTCAAAAAACAGAGGCAAAGCAAAAGCTTCGTAGATAAAACCATTTACGGTGGCTAGCAAAAAATCTTCTTTTGCCTTCGCTCGCGGCTCGCCGTAAACGCCACAGGGCAGCCATCCAGACGTGTGCTAAAGTGCGCCTTCTTCGGTGAAGCGATTCTTTTTTTTTTTTTTTTTTTTTTTTATTGATTTCTGGTGGTCACGTTTGATCTTCGCCTCCCGATCTTCCTGAAGTAGTTTACCTTTGTGGAGAGTATAGCTTGCTCAAGTTAGCGCGATTAATTAACTGGTTCCACAGTCTTATGAGTTCTTAACTGGGTTTTCTTTTTGGTTTGATTTTGATGTGGTTGGTGTTTAATGAGATGGGTGATCTTCTGATACGTGAATGAAGTCACTGATCGAAACCCTAACCCTAAGTTGGATTCTGGGGGAAGATTGACAAAGCTGTGGATGGAATTTCTCTAGTTTTGGTTTATCGGTTATGGATTGCAAGGAGCTCAATTTGAATGAAGATTGTGGTGGCTGTGGTAGCGGGGGAAAGAATGGGGGAGATGGGTTTATAGACAGGAGCAAAGTGAGGATTTTGCTGTGCGATAATGATTCAAAAAGTTCAGAAGAGGTTTTCAAGCTTCTTCTGAAATGTTCCTACCAGGTCATTTCAGTGAGTTCAGCTAGGCAGGTCATTGATGCCTTGAATGCAGAGGGACCTGAAATTGATATTATACTCTCGGAAGTTGACCTGCCAATGGCCAAAGGTATGAAAATGTTGAAGTATATCACCCGGGATAAAGAGCTCCGACGCATTCCTGTTATCATGATGTCAACACAAGATGAGGTCCCTATTGTCGTTAAGTGCTTGAGGCTTGGAGCAGCTGACTATCTTGTAAAGCCTTTACGGACAAATGAGCTATTAAACTTGTGGACGCACATGTGGAGGAGAAGACGCATGCTTGGACTGGCAGAAAAAAACATTTTGAATTATGAATTTGATATGGTGGCATCAGACCCAAGTGATGCTAATACGAATAGTACCACTTTGTTTTCGGATGACACTGATGACAAGTCTCGTAGGAGCACAAATCCAGATGTGGGAATTGCTGCGGCCCATCAGGAAGATGAGTCTGGTATTGCCGCCGCACTTGTAGAGCCTCCTGCTGTTCATACAATGAAACATCAGCCAGATGTACCTGGAATTAGTGAGCGCCGAACAGGGCAACCTTCATCATGCCCTAGAAAGAGTGAACTAAAGATTGGGGAATCCTCCGCATTCTTTACCTATGTCAAATCAAGAAATGTGAAAAATAAGGCAGTAGATGTTGAAGATAATGCTAAACGACTTTTGCTGGATGAAAATCATCAAGAAACAAGTCAGCGTGCAGCTCGTCTTCCCCCAATACAAGAAAGTGGGGAGACCTTGGAAAGCCATTCCCAAGGAGACGAATTCCCTAGCAGTAGTTTTCCTGATTCTTTTTCTGTGGAGAGATCTTGTACACCACCTGCTAGCACAGAAGTTCAAAGGGAAAGAAACATCAATGAAGAAAATTGCTCTCAAGTCCTTGTTCATCCTCGAAATGGATCTCAACTTGATATTTCAGGCCTACCTGTGCAAACACAAACTGCTTATCCTTTTTATATGCCAGAGGGTATGATGTCGGCGCAACTGTACCAAAAGAACCTGCATGATATGCAAAATCATGCGGCAATGATGTCGCAGTATGGTCATTTTCATCATTGCCCTCCCAATGTAAGTGGGGTGGCATCTTATCCTTATTACCCTATGAATATATGTTTACAACCTGGTCAAATGCCAGCTACTACTACTAATACTCATTCATGGCCATCTCTTGGGAATTCGTCTTCCAATGAAGCAAAATCAAACAAATTTGATAGAAGAGAGGCAGCACTGATTAAGTTTAGGCAGAAAAGGAAGGAACGCTGTTTTGATAAGAAGATTAGGTATGTTAATAGGAAACGACTTGCAGAGAGGAGGCCTCGTGTTCGGGGTCAATTTGTGAGAAAGGTAAATGGTGTCAATGTAGATCTTAACGGACAGCCTGCATCTGCTGATGACGTTGAGGACGAAGATGAGGAGGAGGAACTATTATCAAGGGATTCCTCTCACGAGGATGATGGTTCAGGATATTAGAAAAGATATGCTGGGCAAGTGACCAAGGAAATTCATTTTGGAATGGTTTAGTGGCATGAATTATCCCTGGAATACTTGAAATTTATGCTGTTAAAGCTTTATGATCATTACTCGTTCCTGTATGGATCCGGATGGAATATTTATGAAGAATGCATAACCATTTTTATCCAGGGGAGCGAACGAGCATATTCACTGCATGCAATCTCAATGTTGGCAGATCAAATTCTGCTGTTACATGCCCATTGGCCTGCACCAGGTCCTCGTAGCCTCCCGGTTATTGGTGGCTTGGAAACCGCTTCTCTTGAGAGTAATTTTATCCGGTCTTGCTGCTCATGGTGTGCTCAAGCAGGGGTCTTGAGGGCCAAAATACACATACTTCAATATCATTTCCCTGGTGAAACTTAAATGGGTCGAATCAATCGTCGAAAATACATTGACCAATATCGGACAATTGCAGAGGAGAATAGCTTGTTGGAATGTCATTCAAATGAAGCCAAGATCTTACCCTACCCCCAAGCCCAACTTATGTAGTTTGTGAAAGATCTGAATCAAAAGATCGACCAATTTTAATCAAAACTGGACAAGCCATTTTCAGTGTATTGTCTGATAAGTTGATGAAAGTTGTGTTAATATAAAATTATATGTCAAGTAGGAACTTGATTCTCTA 3003 41.86 MDCKELNLNEDCGGCGSGGKNGGDGFIDRSKVRILLCDNDSKSSEEVFKLLLKCSYQVISVSSARQVIDALNAEGPEIDIILSEVDLPMAKGMKMLKYITRDKELRRIPVIMMSTQDEVPIVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKNILNYEFDMVASDPSDANTNSTTLFSDDTDDKSRRSTNPDVGIAAAHQEDESGIAAALVEPPAVHTMKHQPDVPGISERRTGQPSSCPRKSELKIGESSAFFTYVKSRNVKNKAVDVEDNAKRLLLDENHQETSQRAARLPPIQESGETLESHSQGDEFPSSSFPDSFSVERSCTPPASTEVQRERNINEENCSQVLVHPRNGSQLDISGLPVQTQTAYPFYMPEGMMSAQLYQKNLHDMQNHAAMMSQYGHFHHCPPNVSGVASYPYYPMNICLQPGQMPATTTNTHSWPSLGNSSSNEAKSNKFDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVNGVNVDLNGQPASADDVEDEDEEEELLSRDSSHEDDGSGY 554
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 36015238 36020658 - XM_039038134.1 Bhi08g01139 41472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi08g01139 554 MobiDBLite consensus disorder prediction 309 347 - -
Bhi08g01139 554 ProSiteProfiles CCT domain profile. 471 513 IPR010402 GO:0005515
Bhi08g01139 554 ProSiteProfiles Response regulatory domain profile. 33 151 IPR001789 GO:0000160
Bhi08g01139 554 MobiDBLite consensus disorder prediction 177 201 - -
Bhi08g01139 554 MobiDBLite consensus disorder prediction 288 347 - -
Bhi08g01139 554 Pfam Response regulator receiver domain 34 145 IPR001789 GO:0000160
Bhi08g01139 554 PANTHER TWO-COMPONENT RESPONSE REGULATOR-LIKE APRR1 4 531 - -
Bhi08g01139 554 MobiDBLite consensus disorder prediction 519 554 - -
Bhi08g01139 554 Gene3D - 32 243 - -
Bhi08g01139 554 PANTHER TWO-COMPONENT RESPONSE REGULATOR 4 531 IPR045279 GO:0009736
Bhi08g01139 554 MobiDBLite consensus disorder prediction 446 463 - -
Bhi08g01139 554 SUPERFAMILY CheY-like 30 158 IPR011006 -
Bhi08g01139 554 MobiDBLite consensus disorder prediction 228 254 - -
Bhi08g01139 554 MobiDBLite consensus disorder prediction 446 466 - -
Bhi08g01139 554 MobiDBLite consensus disorder prediction 527 543 - -
Bhi08g01139 554 SMART REC_2 32 147 IPR001789 GO:0000160
Bhi08g01139 554 Pfam CCT motif 471 513 IPR010402 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi08g01139 Bhi-Chr8:36015238 Bhi12g00701 Bhi-Chr12:20438051 3.82E-15 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1687 PF00072 Response_reg 8.10E-17 CL0304 Bhi TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi08g01139 K12127 - csv:101220107 996.882