Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi08g01148 GAAAAATAAACAAATTTTGCTGATTGGTTGCTCTAATTTTCACAGCCCGAAATCATAGGCTGACCTTTCGTGCGATCTTGTAAGCAGAGCATTGAATGAATGCCTTTGCCTTTCCCTTTCCTGTTTTGCTGCCCGCCATTCTCCCTTTCCGCCGGTCCCTTCCCTTTTAACTTCCTCCCTCTCTTCCTCTTCTTCTTTTTCTTCTTCATTCACTTCCCCTTTCTCGGTGCGATTCATATCGTACCTCCCCCTTCCCCTTTCCTCACTTGGGTTCTCCCCTTTTTCTTTGATCTTCATCCCTTTTACTTTCTCTCCCATTTCCCTCTCTTGGATTCTCTCAATCTTCCCTTTTTCCCATTTCCTCACTTGGGTTCTCCCTACATTTCCCTTTTTGAGACTTCTTTGTCCATTCTCATTCTTTGTATTGCCTCTTTTTTGGAAACAGGGGAACCCCATTAATGGCTAGCTACCGAACTTTAATGACCTCTTAATCCCTTGGAAGAATACGGGGATAGAGATAGGGCTTTGTTGATTTCATTGCGTTTTTTTAAAAAAATTTAAAATTTTTTTATTTTTATTTTTTTTCTTTATAATGGGAAGGGTTAAGCTGAAAATAAAGAAATTGGAGAGCACTGGTAGCAGGCAAGTGACTTACTCTAAGAGAAGAAATGGGATTATGAAGAAAGCAAGGGAGCTAGCTATACTTTGCGATATTGATATCGTTCTCCTCATGTTTTCGCCAAGTGGAAAGCCGGCGCTATATGAAGGTGAACGCAGCAACATCGAGGAGGTCATTACAAAATTTGCTGAATTGACTCCACAGGAGAGGGCAAAAAGGAAAATGGAAAGCCTTGAAGTGTTGAAGAAAACATTTAAGAAGTTAGACCACGATGTTAACATAAAAGATTTTGTGGGTTCAAGCTCTCAAGATTTTGAGCAGGAATTGACCAATGAAGTTACCATATTGCGAGATCAGATTGGCGAAGCACATAAGAGACTGAGCTATTGGAGGAATCCTGATAGTATCAACAATATGGAGCAGCTCCAGCAGATGGAAGATCTAATAAGGGAGTCCTTAAACCAGACACGTCTACACAAGGAAAATTTAAGAAGACAACAACTACTCTCACAGGACTTCACGGGCCAGTATTCGGGTGGTGGGATGTCCTTACCTTTGTTAATGGACGAAATGCAAAGTACTCAACCCCTGTTATGGCTTCCCAACTATGGCACTCAACAGATTACTTTACCAAATGAGCCTAGCTTTCTGCAACCAGGTGATGTTGAATGCTCATTTCCAAGCTATCCTAGTTTCTTCAACCCTGGGAAAATTGAAGCTGGAATCTCCGGTCATGTTGATAGCATGCCACAAGGTGATGGGGCATTAAATGAATTAAGTGGAACTTCTTGCTCAACATTGCAACTTGGTGATCAATATCCATACCCTACATGTGATGGTTCCAGCTTCCAAGATGAAAAGAGACTGAAAATAGAGATGGAGATGAACTTGCATGCAACTTGTGTGGACACTCAACTAAATGGAAAGTTGGAGCTCTCTAGATCTCTATATGACGATGACCAGCATCCATGGGTTGCTATACCAGGGCCTTGTAGCATTCCAATGTACCAAAGCAATGCATATCACCATCCAAATTGATTCCAATCGAATTTCACCAGTAATTGGACGGGTAACAGATTGAAGAAATGTTCCTCTTGATTGATGAATGATGTGGTCAGCATTTTTGTTGGGATAGCATCCTTCTCCCAATTGCCAGTCAAAAGTATTCGATATATAATGAGATCAGAATGATCTTCGCTCCTCATTTTGCCGTTTAACCAATATCCTCGACTTGTAAATACAATATATACGAGATCAGAGGTTGGTGTTTTAGGTTAGATTTTCTTTTTTTTCCCTTTCCCTCCTCATGGAAGAGCTGTAAAATATTTGGGGTTTTCTGGTTTCCTTAGCTGTACATTGAGCTTTGTAAAACATGGACGCAAATTTCATACTTCTTATATCATATTTCGAGAAAATTAAAGAAGTCGGCATGATTACAATCTTTCTTTCTCAGTTAAACCAAGTTGCATACTTTTATACTACATTTATATAACTGCTACCATCCTGTACAATGATAGTTCCCATGTCTACAATCACACAGATCACACAATATTGCACATAT 2180 40.0 MGRVKLKIKKLESTGSRQVTYSKRRNGIMKKARELAILCDIDIVLLMFSPSGKPALYEGERSNIEEVITKFAELTPQERAKRKMESLEVLKKTFKKLDHDVNIKDFVGSSSQDFEQELTNEVTILRDQIGEAHKRLSYWRNPDSINNMEQLQQMEDLIRESLNQTRLHKENLRRQQLLSQDFTGQYSGGGMSLPLLMDEMQSTQPLLWLPNYGTQQITLPNEPSFLQPGDVECSFPSYPSFFNPGKIEAGISGHVDSMPQGDGALNELSGTSCSTLQLGDQYPYPTCDGSSFQDEKRLKIEMEMNLHATCVDTQLNGKLELSRSLYDDDQHPWVAIPGPCSIPMYQSNAYHHPN 354
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 36269152 36273945 - XM_039038895.1 Bhi08g01148 41481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi08g01148 354 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 11 54 IPR002100 GO:0003677|GO:0046983
Bhi08g01148 354 ProSiteProfiles MADS-box domain profile. 1 61 IPR002100 GO:0003677|GO:0046983
Bhi08g01148 354 Gene3D - 14 96 IPR036879 GO:0003677|GO:0046983
Bhi08g01148 354 SUPERFAMILY SRF-like 2 95 IPR036879 GO:0003677|GO:0046983
Bhi08g01148 354 PANTHER AGAMOUS-LIKE MADS-BOX PROTEIN AGL65 1 352 - -
Bhi08g01148 354 PANTHER SERUM RESPONSE FACTOR HOMOLOG 1 352 - -
Bhi08g01148 354 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
Bhi08g01148 354 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Bhi08g01148 354 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Bhi08g01148 354 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi08g01148 Bhi-Chr8:36269152 Bhi08g01151 Bhi-Chr8:36269712 0 dispersed
Bhi08g01148 Bhi-Chr8:36269152 Bhi08g01149 Bhi-Chr8:36269152 0 tandem
Bhi07g01547 Bhi-Chr7:44525552 Bhi08g01148 Bhi-Chr8:36269152 3.08E-107 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1689 PF00319 SRF-TF 1.20E-19 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi08g01148 - - csv:101220182 657.521