Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi08g01152 GGAGGTAGAGGGGGTTGAAAAATAAACAAATTTTGCTGATTGGTTGCTCTAATTTTCACAGCCCGAAATCATAGGCTGACCTTTCGTGCGATCTTGTAAGCAGAGCATTGAATGAATGCCTTTGCCTTTCCCTTTCCTGTTTTGCTGCCCGCCATTCTCCCTTTCCGCCGGTCCCTTCCCTTTTAACTTCCTCCCTCTCTTCCTCTTCTTCTTTTTCTTCTTCATTCACTTCCCCTTTCTCGGTGCGATTCATATCGTACCTCCCCCTTCCCCTTTCCTCACTTGGGTTCTCCCCTTTTTCTTTGATCTTCATCCCTTTTACTTTCTCTCCCATTTCCCTCTCTTGGATTCTCTCAATCTTCCCTTTTTCCCATTTCCTCACTTGGGTTCTCCCTACATTTCCCTTTTTGAGACTTCTTTGTCCATTCTCATTCTTTGTATTGCCTCTTTTTTGGAAACAGGGGAACCCCATTAATGGCTAGCTACCGAACTTTAATGACCTCTTAATCCCTTGGAAGAATACGGGGATAGAGATAGGGCTTTGTTGATTTCATTGCGTTTTTTTAAAAAAATTTAAAATTTTTTTATTTTTATTTTTTTTCTTTATAATGGGAAGGGTTAAGCTGAAAATAAAGAAATTGGAGAGCACTGGTAGCAGGCAAGTGACTTACTCTAAGAGAAGAAATGGGATTATGAAGAAAGCAAGGGAGCTAGCTATACTTTGCGATATTGATATCGTTCTCCTCATGTTTTCGCCAAGTGGAAAGCCGGCGCTATATGAAGGTGAACGCAGCAACATCGAGGAGGTCATTACAAAATTTGCTGAATTGACTCCACAGGAGAGGGCAAAAAGGAAAATGGAAAGCCTTGAAGTGTTGAAGAAAACATTTAAGAAGTTAGACCACGATGTTAACATAAAAGATTTTGTGGGTTCAAGCTCTCAAGATTTTGAGCAGGAATTGACCAATGAAGTTACCATATTGCGAGATCAGATTGGCGAAGCACATAAGAGACTGAGCTATTGGAGGAATCCTGATAGTATCAACAATATGGAGCAGCTCCAGCAGATGGAAGATCTAATAAGGGAGTCCTTAAACCAGACACGTCTACACAAGGAAAATTTAAGAAGACAACAACTACTCTCACAGGACTTCACGGGCCAGTATTCGGGTGGTGGGATGTCCTTACCTTTGTTAATGGACGAAATGCAAAGTACTCAACCCCTGTTATGGCTTCCCAACTATGGCACTCAACAGATTACTTTACCAAATGAGCCTAGCTTTCTGCAACCAGGAATTTATACTGGGGAATGTCTGCAGTGATGTTGAATGCTCATTTCCAAGCTATCCTAGTTTCTTCAACCCTGGGAAAATTGAAGCTGGAATCTCCGGTCATGTTGATAGCATGCCACAAGGTGATGGGGCATTAAATGAATTAAGTGGAACTTCTTGCTCAACATTGC 1462 41.66 MGRVKLKIKKLESTGSRQVTYSKRRNGIMKKARELAILCDIDIVLLMFSPSGKPALYEGERSNIEEVITKFAELTPQERAKRKMESLEVLKKTFKKLDHDVNIKDFVGSSSQDFEQELTNEVTILRDQIGEAHKRLSYWRNPDSINNMEQLQQMEDLIRESLNQTRLHKENLRRQQLLSQDFTGQYSGGGMSLPLLMDEMQSTQPLLWLPNYGTQQITLPNEPSFLQPGIYTGECLQ 237
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 36270252 36273961 - XM_039038896.1 Bhi08g01152 41485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi08g01152 237 PANTHER SERUM RESPONSE FACTOR HOMOLOG 1 226 - -
Bhi08g01152 237 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Bhi08g01152 237 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Bhi08g01152 237 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
Bhi08g01152 237 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 11 54 IPR002100 GO:0003677|GO:0046983
Bhi08g01152 237 Gene3D - 14 97 IPR036879 GO:0003677|GO:0046983
Bhi08g01152 237 ProSiteProfiles MADS-box domain profile. 1 61 IPR002100 GO:0003677|GO:0046983
Bhi08g01152 237 PANTHER AGAMOUS-LIKE MADS-BOX PROTEIN AGL65 1 226 - -
Bhi08g01152 237 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
Bhi08g01152 237 SUPERFAMILY SRF-like 2 95 IPR036879 GO:0003677|GO:0046983
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi08g01150 Bhi-Chr8:36269152 Bhi08g01152 Bhi-Chr8:36270252 1.97E-165 dispersed
Bhi08g01152 Bhi-Chr8:36270252 Bhi04g00934 Bhi-Chr4:23809905 7.63E-18 dispersed
Bhi08g01151 Bhi-Chr8:36269712 Bhi08g01152 Bhi-Chr8:36270252 3.80E-168 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1693 PF00319 SRF-TF 6.30E-20 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi08g01152 - - csv:101220182 420.624