Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bhi08g01152 | GGAGGTAGAGGGGGTTGAAAAATAAACAAATTTTGCTGATTGGTTGCTCTAATTTTCACAGCCCGAAATCATAGGCTGACCTTTCGTGCGATCTTGTAAGCAGAGCATTGAATGAATGCCTTTGCCTTTCCCTTTCCTGTTTTGCTGCCCGCCATTCTCCCTTTCCGCCGGTCCCTTCCCTTTTAACTTCCTCCCTCTCTTCCTCTTCTTCTTTTTCTTCTTCATTCACTTCCCCTTTCTCGGTGCGATTCATATCGTACCTCCCCCTTCCCCTTTCCTCACTTGGGTTCTCCCCTTTTTCTTTGATCTTCATCCCTTTTACTTTCTCTCCCATTTCCCTCTCTTGGATTCTCTCAATCTTCCCTTTTTCCCATTTCCTCACTTGGGTTCTCCCTACATTTCCCTTTTTGAGACTTCTTTGTCCATTCTCATTCTTTGTATTGCCTCTTTTTTGGAAACAGGGGAACCCCATTAATGGCTAGCTACCGAACTTTAATGACCTCTTAATCCCTTGGAAGAATACGGGGATAGAGATAGGGCTTTGTTGATTTCATTGCGTTTTTTTAAAAAAATTTAAAATTTTTTTATTTTTATTTTTTTTCTTTATAATGGGAAGGGTTAAGCTGAAAATAAAGAAATTGGAGAGCACTGGTAGCAGGCAAGTGACTTACTCTAAGAGAAGAAATGGGATTATGAAGAAAGCAAGGGAGCTAGCTATACTTTGCGATATTGATATCGTTCTCCTCATGTTTTCGCCAAGTGGAAAGCCGGCGCTATATGAAGGTGAACGCAGCAACATCGAGGAGGTCATTACAAAATTTGCTGAATTGACTCCACAGGAGAGGGCAAAAAGGAAAATGGAAAGCCTTGAAGTGTTGAAGAAAACATTTAAGAAGTTAGACCACGATGTTAACATAAAAGATTTTGTGGGTTCAAGCTCTCAAGATTTTGAGCAGGAATTGACCAATGAAGTTACCATATTGCGAGATCAGATTGGCGAAGCACATAAGAGACTGAGCTATTGGAGGAATCCTGATAGTATCAACAATATGGAGCAGCTCCAGCAGATGGAAGATCTAATAAGGGAGTCCTTAAACCAGACACGTCTACACAAGGAAAATTTAAGAAGACAACAACTACTCTCACAGGACTTCACGGGCCAGTATTCGGGTGGTGGGATGTCCTTACCTTTGTTAATGGACGAAATGCAAAGTACTCAACCCCTGTTATGGCTTCCCAACTATGGCACTCAACAGATTACTTTACCAAATGAGCCTAGCTTTCTGCAACCAGGAATTTATACTGGGGAATGTCTGCAGTGATGTTGAATGCTCATTTCCAAGCTATCCTAGTTTCTTCAACCCTGGGAAAATTGAAGCTGGAATCTCCGGTCATGTTGATAGCATGCCACAAGGTGATGGGGCATTAAATGAATTAAGTGGAACTTCTTGCTCAACATTGC | 1462 | 41.66 | MGRVKLKIKKLESTGSRQVTYSKRRNGIMKKARELAILCDIDIVLLMFSPSGKPALYEGERSNIEEVITKFAELTPQERAKRKMESLEVLKKTFKKLDHDVNIKDFVGSSSQDFEQELTNEVTILRDQIGEAHKRLSYWRNPDSINNMEQLQQMEDLIRESLNQTRLHKENLRRQQLLSQDFTGQYSGGGMSLPLLMDEMQSTQPLLWLPNYGTQQITLPNEPSFLQPGIYTGECLQ | 237 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 36270252 | 36273961 | - | XM_039038896.1 | Bhi08g01152 | 41485 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bhi08g01152 | 237 | PANTHER | SERUM RESPONSE FACTOR HOMOLOG | 1 | 226 | - | - | |
Bhi08g01152 | 237 | PRINTS | MADS domain signature | 3 | 23 | IPR002100 | GO:0003677|GO:0046983 | |
Bhi08g01152 | 237 | PRINTS | MADS domain signature | 23 | 38 | IPR002100 | GO:0003677|GO:0046983 | |
Bhi08g01152 | 237 | PRINTS | MADS domain signature | 38 | 59 | IPR002100 | GO:0003677|GO:0046983 | |
Bhi08g01152 | 237 | Pfam | SRF-type transcription factor (DNA-binding and dimerisation domain) | 11 | 54 | IPR002100 | GO:0003677|GO:0046983 | |
Bhi08g01152 | 237 | Gene3D | - | 14 | 97 | IPR036879 | GO:0003677|GO:0046983 | |
Bhi08g01152 | 237 | ProSiteProfiles | MADS-box domain profile. | 1 | 61 | IPR002100 | GO:0003677|GO:0046983 | |
Bhi08g01152 | 237 | PANTHER | AGAMOUS-LIKE MADS-BOX PROTEIN AGL65 | 1 | 226 | - | - | |
Bhi08g01152 | 237 | SMART | madsneu2 | 1 | 60 | IPR002100 | GO:0003677|GO:0046983 | |
Bhi08g01152 | 237 | SUPERFAMILY | SRF-like | 2 | 95 | IPR036879 | GO:0003677|GO:0046983 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bhi08g01150 | Bhi-Chr8:36269152 | Bhi08g01152 | Bhi-Chr8:36270252 | 1.97E-165 | dispersed | |
Bhi08g01152 | Bhi-Chr8:36270252 | Bhi04g00934 | Bhi-Chr4:23809905 | 7.63E-18 | dispersed | |
Bhi08g01151 | Bhi-Chr8:36269712 | Bhi08g01152 | Bhi-Chr8:36270252 | 3.80E-168 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
1693 | PF00319 | SRF-TF | 6.30E-20 | No_clan | Bhi | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bhi08g01152 | - | - | csv:101220182 | 420.624 |