Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi08g01152 GGAGGTAGAGGGGGTTGAAAAATAAACAAATTTTGCTGATTGGTTGCTCTAATTTTCACAGCCCGAAATCATAGGCTGACCTTTCGTGCGATCTTGTAAGCAGAGCATTGAATGAATGCCTTTGCCTTTCCCTTTCCTGTTTTGCTGCCCGCCATTCTCCCTTTCCGCCGGTCCCTTCCCTTTTAACTTCCTCCCTCTCTTCCTCTTCTTCTTTTTCTTCTTCATTCACTTCCCCTTTCTCGGTGCGATTCATATCGTACCTCCCCCTTCCCCTTTCCTCACTTGGGTTCTCCCCTTTTTCTTTGATCTTCATCCCTTTTACTTTCTCTCCCATTTCCCTCTCTTGGATTCTCTCAATCTTCCCTTTTTCCCATTTCCTCACTTGGGTTCTCCCTACATTTCCCTTTTTGAGACTTCTTTGTCCATTCTCATTCTTTGTATTGCCTCTTTTTTGGAAACAGGGGAACCCCATTAATGGCTAGCTACCGAACTTTAATGACCTCTTAATCCCTTGGAAGAATACGGGGATAGAGATAGGGCTTTGTTGATTTCATTGCGTTTTTTTAAAAAAATTTAAAATTTTTTTATTTTTATTTTTTTTCTTTATAATGGGAAGGGTTAAGCTGAAAATAAAGAAATTGGAGAGCACTGGTAGCAGGCAAGTGACTTACTCTAAGAGAAGAAATGGGATTATGAAGAAAGCAAGGGAGCTAGCTATACTTTGCGATATTGATATCGTTCTCCTCATGTTTTCGCCAAGTGGAAAGCCGGCGCTATATGAAGGTGAACGCAGCAACATCGAGGAGGTCATTACAAAATTTGCTGAATTGACTCCACAGGAGAGGGCAAAAAGGAAAATGGAAAGCCTTGAAGTGTTGAAGAAAACATTTAAGAAGTTAGACCACGATGTTAACATAAAAGATTTTGTGGGTTCAAGCTCTCAAGATTTTGAGCAGGAATTGACCAATGAAGTTACCATATTGCGAGATCAGATTGGCGAAGCACATAAGAGACTGAGCTATTGGAGGAATCCTGATAGTATCAACAATATGGAGCAGCTCCAGCAGATGGAAGATCTAATAAGGGAGTCCTTAAACCAGACACGTCTACACAAGGAAAATTTAAGAAGACAACAACTACTCTCACAGGACTTCACGGGCCAGTATTCGGGTGGTGGGATGTCCTTACCTTTGTTAATGGACGAAATGCAAAGTACTCAACCCCTGTTATGGCTTCCCAACTATGGCACTCAACAGATTACTTTACCAAATGAGCCTAGCTTTCTGCAACCAGGAATTTATACTGGGGAATGTCTGCAGTGATGTTGAATGCTCATTTCCAAGCTATCCTAGTTTCTTCAACCCTGGGAAAATTGAAGCTGGAATCTCCGGTCATGTTGATAGCATGCCACAAGGTGATGGGGCATTAAATGAATTAAGTGGAACTTCTTGCTCAACATTGC 1462 41.66 MGRVKLKIKKLESTGSRQVTYSKRRNGIMKKARELAILCDIDIVLLMFSPSGKPALYEGERSNIEEVITKFAELTPQERAKRKMESLEVLKKTFKKLDHDVNIKDFVGSSSQDFEQELTNEVTILRDQIGEAHKRLSYWRNPDSINNMEQLQQMEDLIRESLNQTRLHKENLRRQQLLSQDFTGQYSGGGMSLPLLMDEMQSTQPLLWLPNYGTQQITLPNEPSFLQPGIYTGECLQ 237
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 36270252 36273961 - XM_039038896.1 Bhi08g01152 41485

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi08g01152 237 PANTHER SERUM RESPONSE FACTOR HOMOLOG 1 226 - -
Bhi08g01152 237 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Bhi08g01152 237 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Bhi08g01152 237 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
Bhi08g01152 237 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 11 54 IPR002100 GO:0003677|GO:0046983
Bhi08g01152 237 Gene3D - 14 97 IPR036879 GO:0003677|GO:0046983
Bhi08g01152 237 ProSiteProfiles MADS-box domain profile. 1 61 IPR002100 GO:0003677|GO:0046983
Bhi08g01152 237 PANTHER AGAMOUS-LIKE MADS-BOX PROTEIN AGL65 1 226 - -
Bhi08g01152 237 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
Bhi08g01152 237 SUPERFAMILY SRF-like 2 95 IPR036879 GO:0003677|GO:0046983
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi08g01152 - - - csv:101220182 420.624
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi08g01150 Bhi-Chr8:36269152 Bhi08g01152 Bhi-Chr8:36270252 1.97E-165 dispersed
Bhi08g01152 Bhi-Chr8:36270252 Bhi04g00934 Bhi-Chr4:23809905 7.63E-18 dispersed
Bhi08g01151 Bhi-Chr8:36269712 Bhi08g01152 Bhi-Chr8:36270252 3.80E-168 tandem
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Bhi08g01150 . 1 233 Type I MADS-box Gene Family AT2G03060 53.2 7.6e-60 228.8
Bhi08g01151 . 1 234 Type I MADS-box Gene Family AT2G03060 52.9 1.9e-58 224.2
Bhi08g01149 . 1 234 Type I MADS-box Gene Family AT2G03060 52.9 1.9e-58 224.2
Bhi08g01148 . 1 234 Type I MADS-box Gene Family AT2G03060 52.9 1.9e-58 224.2
Bhi08g01152 . 1 227 Type I MADS-box Gene Family AT2G03060 53.2 2.7e-57 220.3
Bhi11g01095 . 7 159 Type I MADS-box Gene Family AT2G24840 54.5 1.4e-36 151.0
Bhi11g01095 . 1 165 Type I MADS-box Gene Family AT5G60440 59.5 5.8e-47 185.7
Bhi01g02468 . 1 174 Type I MADS-box Gene Family AT1G77950 58.3 2.5e-51 199.9
Bhi07g00164 . 1 163 Type I MADS-box Gene Family AT5G48670 63.2 6.8e-54 208.8
Bhi07g00165 . 1 163 Type I MADS-box Gene Family AT5G48670 61.3 1.1e-51 201.4
Bhi08g00789 . 1 158 Type I MADS-box Gene Family AT5G48670 57.6 1.4e-46 184.5
Bhi08g00790 . 1 158 Type I MADS-box Gene Family AT5G48670 52.5 7.8e-42 168.7
Bhi08g01150 . 1 233 Type I MADS-box Gene Family AT2G03060 53.2 7.6e-60 228.8
Bhi08g01151 . 1 234 Type I MADS-box Gene Family AT2G03060 52.9 1.9e-58 224.2
Bhi08g01149 . 1 234 Type I MADS-box Gene Family AT2G03060 52.9 1.9e-58 224.2
Bhi08g01148 . 1 234 Type I MADS-box Gene Family AT2G03060 52.9 1.9e-58 224.2
Bhi08g01152 . 1 227 Type I MADS-box Gene Family AT2G03060 53.2 2.7e-57 220.3
Bhi11g01095 . 7 159 Type I MADS-box Gene Family AT2G24840 54.5 1.4e-36 151.0
Bhi11g01095 . 1 165 Type I MADS-box Gene Family AT5G60440 59.5 5.8e-47 185.7
Bhi01g02468 . 1 174 Type I MADS-box Gene Family AT1G77950 58.3 2.5e-51 199.9
Bhi07g00164 . 1 163 Type I MADS-box Gene Family AT5G48670 63.2 6.8e-54 208.8
Bhi07g00165 . 1 163 Type I MADS-box Gene Family AT5G48670 61.3 1.1e-51 201.4
Bhi08g00789 . 1 158 Type I MADS-box Gene Family AT5G48670 57.6 1.4e-46 184.5
Bhi08g00790 . 1 158 Type I MADS-box Gene Family AT5G48670 52.5 7.8e-42 168.7
Bhi08g01150 . 1 233 Type I MADS-box Gene Family AT2G03060 53.2 7.6e-60 228.8
Bhi08g01151 . 1 234 Type I MADS-box Gene Family AT2G03060 52.9 1.9e-58 224.2
Bhi08g01149 . 1 234 Type I MADS-box Gene Family AT2G03060 52.9 1.9e-58 224.2
Bhi08g01148 . 1 234 Type I MADS-box Gene Family AT2G03060 52.9 1.9e-58 224.2
Bhi08g01152 . 1 227 Type I MADS-box Gene Family AT2G03060 53.2 2.7e-57 220.3
Bhi11g01095 . 1 165 Type I MADS-box Gene Family AT5G60440 59.5 5.8e-47 185.7
Bhi07g00164 . 1 163 Type I MADS-box Gene Family AT5G48670 63.2 6.8e-54 208.8
Bhi07g00165 . 1 163 Type I MADS-box Gene Family AT5G48670 61.3 1.1e-51 201.4
Bhi08g00789 . 1 158 Type I MADS-box Gene Family AT5G48670 57.6 1.4e-46 184.5
Bhi08g00790 . 1 158 Type I MADS-box Gene Family AT5G48670 52.5 7.8e-42 168.7
Bhi11g01095 . 7 159 Type I MADS-box Gene Family AT2G24840 54.5 1.4e-36 151.0
Bhi01g02468 . 1 174 Type I MADS-box Gene Family AT1G77950 58.3 2.5e-51 199.9
Bhi08g01150 . 1 233 Type I MADS-box Gene Family AT2G03060 53.2 7.6e-60 228.8
Bhi08g01151 . 1 234 Type I MADS-box Gene Family AT2G03060 52.9 1.9e-58 224.2
Bhi08g01149 . 1 234 Type I MADS-box Gene Family AT2G03060 52.9 1.9e-58 224.2
Bhi08g01148 . 1 234 Type I MADS-box Gene Family AT2G03060 52.9 1.9e-58 224.2
Bhi08g01152 . 1 227 Type I MADS-box Gene Family AT2G03060 53.2 2.7e-57 220.3
Bhi11g01095 . 1 165 Type I MADS-box Gene Family AT5G60440 59.5 5.8e-47 185.7
Bhi07g00164 . 1 163 Type I MADS-box Gene Family AT5G48670 63.2 6.8e-54 208.8
Bhi07g00165 . 1 163 Type I MADS-box Gene Family AT5G48670 61.3 1.1e-51 201.4
Bhi08g00789 . 1 158 Type I MADS-box Gene Family AT5G48670 57.6 1.4e-46 184.5
Bhi08g00790 . 1 158 Type I MADS-box Gene Family AT5G48670 52.5 7.8e-42 168.7
Bhi11g01095 . 7 159 Type I MADS-box Gene Family AT2G24840 54.5 1.4e-36 151.0
Bhi01g02468 . 1 174 Type I MADS-box Gene Family AT1G77950 58.3 2.5e-51 199.9
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0012582 0 5 0 0 0 1 2 1 1 1 1 1 1 1 1 1 1 0 1 1 1 1 1 1 1 1 1 1 1 0 29
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1693 PF00319 SRF-TF 6.30E-20 No_clan Bhi TF