Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi08g01181 TAGAAGGTGGGTAAAAAGGTGGAAAGATATAATTTTAGGATGGGATAGATAAAAAAAGAAATTAATACAGAAAATAACAATAATAAATAAATAAATAAAAACAACTGTCGAATGTCAAACCCGTTTCTTCCTCCCTAACCTCCTTCTTCTCCACCTCAAAGCTTCAGAAAATTTCTCCACAAAACCCTAACCTTCTCTCTGTCACATCCCCCCTTTCTTCCCAAAATCAAAACAATCCAATTCCAAATTCAAGCTTGAATGAATCTTCCTAATTCCTCCATCCATGCAACCATTTCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCAACCATGTCTTTTAGCCGCTCAATGCGCTCTCAATCCCTCGCTAATCCACCTCCGTTAGCCGAGAAAATCACCGAAGAACCAATCACCAACAAAACCGCTCAAAGCACCGTCACCTGTTTTTACCAGGCCAACATCGCCGGATACTGGCGCAACGTCACCATTTTATGGTGTAAAAATCTCATGAACCACACTTTAACCATCACAATCCAGAGTCTCCAAGGCGATTTCCATTGCAATTACAAAATCGACGTCAAGCCTTGGCATTTTTGGAGCAAAAAAGGCTTCAAATCCCTAGAATTAGACGGTAATCAAATCGATATTTATTGGGACGTTCGTTCTGCTAAATTTTCTACTGGTCCTGAACCTCACTCTGATTTCTACGTCGCTTTAGTTTCCGACGAAGAAGTCGTTTTGCTTTTGGGAGATTACAAGAAGAAAGCTTATAAAAGAACTAAATCTAGACCTGCTCTTGTTGAAGCGATTTTGATTTACAAAAAGGAAAATGTCTTTGCGAAGAAATGCTTTTCAACCAGGGCTAAATTTGATGATCGGCGTAAGGAATGTGATATTGTTGTTGAGATTTCAACTTCCGGCGCTAAAGATCCGGAGATGTGGATTAGTATAGACGGGATTGTTCTTGTTCAGGTCAAGAATTTGCAGTGGAAATTTAGGGGAAATCAAACGGTTGTTGTTAACAAGCAATCGGTTCAAATCCTCTGGGATGTTCATGATTGGCTCTTCACTAACCCGGGTACGGGTCATGGATTGTTTATTTTTAAACCCGGTCCAGCCGAATCGGAAAGCGACAAGGAAGGTAGCGGCGGCGGAGGCGGAGGCGCCGGGTTGGAGCCGAGTGAGGACGGCAGTATTTATTACTCGACTCGCAGCATGAACTCGTCTCACCAGACCGAGTTCTGCCTTTTCCTTTATGCGTGGAAATTGGAATGATTTATTTAAAAAAAAAACAAAAAAGAAGGATTTTTTTTTTAATTACAAAACTAGCTCAAGCACGTATTAATTAATGATTTGAGTGATTAAATGATTAATTAATGTACCGTGCATGTCACGTGCCTTCTTCGTAAATATATACATGTATTTATGTATGTATATATTGACCTCTGCTGACTATGCATGACCACTTGACATAGTATTGGGAGTGTTTGTTTCG 1509 39.96 MSFSRSMRSQSLANPPPLAEKITEEPITNKTAQSTVTCFYQANIAGYWRNVTILWCKNLMNHTLTITIQSLQGDFHCNYKIDVKPWHFWSKKGFKSLELDGNQIDIYWDVRSAKFSTGPEPHSDFYVALVSDEEVVLLLGDYKKKAYKRTKSRPALVEAILIYKKENVFAKKCFSTRAKFDDRRKECDIVVEISTSGAKDPEMWISIDGIVLVQVKNLQWKFRGNQTVVVNKQSVQILWDVHDWLFTNPGTGHGLFIFKPGPAESESDKEGSGGGGGGAGLEPSEDGSIYYSTRSMNSSHQTEFCLFLYAWKLE 314
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 37024081 37025589 + XM_039039469.1 Bhi08g01181 41514

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi08g01181 314 MobiDBLite consensus disorder prediction 263 284 - -
Bhi08g01181 314 Pfam Plant protein of unknown function (DUF868) 32 312 IPR008586 -
Bhi08g01181 314 PANTHER EXPRESSED PROTEIN 7 314 IPR008586 -
Bhi08g01181 314 PANTHER DUF868 FAMILY PROTEIN (DUF868) 7 314 - -
Bhi08g01181 314 MobiDBLite consensus disorder prediction 1 26 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi08g01181 - - - csv:101212848 595.89
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi04g00691 Bhi-Chr4:16447205 Bhi08g01181 Bhi-Chr8:37024081 1.65E-78 dispersed
Bhi08g01181 Bhi-Chr8:37024081 Bhi09g01097 Bhi-Chr9:25354029 5.30E-54 dispersed
Bhi08g01181 Bhi-Chr8:37024081 Bhi04g00038 Bhi-Chr4:901433 1.06E-37 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g496 . . . . . . . Bma12g01007 . . . . Car10g00168 . . . . . . . . . . . . . . . . . . . . Cone13ag0088 Cone19ag0091 . . . . . Blo15g00305 . . . . . . Sed08g2640 Cmo10g00197 . . . . . . . Bhi08g01181 Tan05g2690 Cmetu03g1526 . Hepe07g1730 . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007139 1 1 1 2 2 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 1 1 1 37
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bhi08g01181 Bhi_Chr08 FPKM 86.844887 90.976578 46.620956 49.15316 31.96417 31.288836 32.443951 66.955055 67.573174 76.800812