Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi08g01209 AATTTATATGTCTTCGATTGAGAAAGAACTGGTTCCTAATTTGTTGATAAACTGCTGCAAGGCTTTCAAGAGCGGAAGTGAGCAGCATGACCAGCCATTTCTGGAGAATGGAGTGCAACCTGCGGACGAGGACAAGCAGAAACTGAGAGATTTGAGGTTAAGGTGAAGAAAATTGCACGTGAATAAGAAGATTAGTTTCAAGTTGGGAACAAGTCATTTTTTCCGCATAAAGCCGTGTGCATATCACAAACCAACTTAGGCAGTTATAATTGATAATGTAAGGCTGGTTCGTATTGATTACTGGGTAGAGAAATCAGAGGTAGGTATTCACTTCTATAACCATATGGCTCACACTGACAACCAAATAAGGCGTGCAAGGTGCTGGTTCCCTTGTATGGATGATGGCCTACAACGATGCAAGTATGACCTCGAGTTTACCGTCTCTCAAAATCTTGTGGCTGTCAGTAATGGAATTCTGTTGTACCAGGTCTTGAGCAAGGACAATCCTCCCCGCAAAACTTATGTGTATCAGGTAGACATCCCTGTCAATGCACATTGGATATCACTTGCCGTTGGTCCGTTTGAAATCCTTGCTGATCACCAAAATGGACTTATATCACACATGTGCTCGCCTGTTAATTCTTTAAAGCTCAAGCATACGGTGGAATTTTTTCATAGTGCATTCAGCTGCTATAAGGATTACCTCTCTGTGGACTTCCCATTTGGGTCGTACAAACAAATCTTCATAGAGCCGGAGATTGCAGTATCATCAATATGTTTGGGAGTTTCCATGTGTATATTTAGTTCTCATCTTTTGTTTGATGAGAAGATCATCGATCAGACCATAGATACGAGGATTAAACTTGCTTATGCTCTAGCAAGACAGTGGTTTGGCATTTATATTACCCCTGAAGCCCCAAATGATGAGTGGTTGTTGGATGGTCTTGCTGGTTTTCTGACTGATTTATTTATCAAGAAGAACTTGGGAAATAATGAGGCACGCTACCAGAGATACAAGGCAAATTGTGCTGTTTGCAGAGCAGATGATAGTGGTTTGACCACCTTGAGTTCCTCTTCTGCTTGTAAAGATTTGTATGGGACCCAACGTATTGGTATATATGGAAAAATAAGATCATGGAAGTCTGTGGCAATCCTTCAAATGTTGGAAAAGCAGATGGGCCCTGAGTCTTTCCGCAAGATTCTACAAAATATTGTTTCTCGTGCTAGAGATACAGCCTCTACATCACAATCCCTTAGCACGAAGGAGTTTCGCCAATTGGCCAATAAGATTGGAAACCTTGAGCGGCCGTTTCTTAAAGAGTTCTTTCCTCGGTGGGTTGAATCATGTGGTTGTCCAGTGTTGAGGATGGGATTTTCCTACAACAAGCGAAAAAATATGGTCGAAATGGCGGTGTCACGGGAATGCACAGTTTCACCAGCCACAAGTGTAGAAAATCGGGACAGTGATACTGGATGGCCTGGCATGATGAGTATCAGGATTTACGAACTTGACGGTGTGTTTGATCATCCAGTTCTTCCAATGACTGGAGAGACTTGGCAGCTACTAGAAATACAATGCCACTCCAAACTTGCTGCTAGACGCCTCCAGAAAACTAAAAAGGGGTCAAAACCTGATGGTTCTGATGACAATGCTGATATACCTGCACTTGACGTTCGCTCTAGTGTGGAATCTCCTTTGCTATGGTTGAGAGCAGACCCGGAGATGGAATACCTTGCTGAAATTCATTTTCATCAACCTATTCAGATGTGGATCAATCAATTAGAGAAGGACAAGGATGTCATTGCCCAAGCACAAGCAATCGCGACCTTAGAGATGTTGCCTCAACCATCTTTTGCTGTTGTTAATGCTCTGAACAATTTCCTGAGAGACCCCAAGGCCTTCTGGAGAGTAAGAATTGAAGCAGCAGTGGCAATGGCCAAAACAGCCTCAGAGGATACTGATTGGGCTGGTTTGCTTAATTTGATTAAATTTTTTAAAAGTCAGAGGTTTGATGCAGATACTGGACTCCCCAAGCCAAATGAATTTCGTGATTTTCCGGAGTATTTTCTTCTTGAGGCCATTCCTCATGCTGTTGCTATGGTCAGGACCTCTGACCAAAAAAGCCCTAGAGAAGCTGTTGAGTTTGTTTTGCAACTTTTGAAGTACAACGACAACAATGGGAATCCGTACTCTGATGTTTTCTGGTTGGCTGCACTAGTCCAGTCAGTTGGTGAGCTTGAATTTGGGCAACAGAGCATTCTCTTTTTAGCATCGCTTCTTAAAAGGATTGATAGACTTTTGCAGTTTGACAGGCTGATGCCTAGCTATAACGGGATCTTGACTATTAGCTGCATCAGAACCTTAACCCAGATTGCACTGAAACTATCTGGACTTCTCTCTCTTGATCGTATTTCTGAACTGATAAGACCTTTTCGAGATTTTAGTTCCATGTGGCAAGTTCGAATTGAGGCAACCCGAGCGCTTCTCGATCTTGAGTACCACTGCAACGGAATTGATGCAGCATTGTTGTTGTTTATCAAATATTTAGAAGAAGAGAGTTCCTTGCGAGGGCAAGTGAAGCTGGGGGTCCAAGTTATGCGTTTATGTCAGATAATGCGAAGATCTGATTCAAATGATGTAGTCAATAATGACACTCTTGTTGCTTTGCTCCTCCTACTTGAAGGCCAGATGGCATTTAACAATGTCTATCTTCGTCACTACTTGTTCTGTATTTTACAAGTCCTTGCAGGAAGGCCCCCAACACTTTATGGAGTTCCTAGAGAATATAAAACATTGCATATGGGTGACACGGGAACTTGCAGTGAACAGAAGAGGATGTTAACTTCTCTCATTCCTGAATTCAATCCACCAGAGCCATCATCAGTCTCTGCAGTGGCGCCTATGCCGTATATTCCAGCAACTCTGTCATCAGAACCACTTCATACTCCTACACTAAGGCCTGACAGCTTGGCAATTCCCGAGCTTTCCAAGGAAGGAGGAGCAATTGCAGAGGTTCCTAAGCAAGCTAGGGCAATAGCAGAAGCTCCCAGAGAAGCAGCCTCTGTTTCCAACAGTCACGAGAGGAAGTTGCCGGTTGTTAAGATCAAAGTCAGATCGTCTGCTGCTACAAGTAGAGCAGATGCTGATAATCTGACCACTGAAAGATCTCATGCTGCACCTCGTGAAACAGATGTTGGTCCCAGTAGTTCCGTTTCTGTTGACGCACCCCAAAGAAATATTGCTGAGGCTACAAGTATCAGCAACCATATTCTAGAGGAAGTTAACTCCTGTCACGATCGCGGGTCTCACATGACAGCCAGCATTGGCAGTGCAAAACTTACAAGTTATGGTGACGAACTCGAGAAGGAGTTCCAATGCACGGCTGATTCCAGTAGGGCTTTTGGACATTTTCAGCCAGAAGATCCTTCGTCATCGAGCATCATACAAGATAACAATATTGATGCTGATGCACAGAAGTATGCAAGTCTTCAGACACTTTCTTTACCACAGCATGATCATGGCTTAGCCTCTTCGCACTCTCGCCATGGGAAAAAGGAAAAGAAGAAGAAAGACAAAGAAAAGAAACGTAAACGAGAACATAAAGAACATCGCAACGATCCTGAATACATTGAGCGCAAACGGCTGAAGAAAGAGAAGAAACAAAAAGAAAAAGAGATGGCAAAGCTATTGATTGAAGAGGTGAAGCCACTGCCAATTGCAATGCCTCGAATAAAAGAACCACCAACCAAGTCAACACCCGTGCAGTTGGAAGCAAACGAACCTAGTGGATCAAGATTAATAGTAGGAGTTCATAGTAAGCCCGAGGCATCAGAAGGTACTACTTCTGCTGCCCCCAAACTTAGAATTAAATTCAAAAATCGGACGCTGAACAATTCATAATGGATGTAATCAGCTCTTCTTCTTACATTAGTTGAAATCCTTCCCAATTGTTGGCTCTCAACCTTAATCCTCTTCGAGGCTAGGTATATAATCTGAGCTCTGTGATATAGCACAATGAAATTCAATCAATCAAAGTCCCTCCTTTATCACAA 4053 42.96 MAHTDNQIRRARCWFPCMDDGLQRCKYDLEFTVSQNLVAVSNGILLYQVLSKDNPPRKTYVYQVDIPVNAHWISLAVGPFEILADHQNGLISHMCSPVNSLKLKHTVEFFHSAFSCYKDYLSVDFPFGSYKQIFIEPEIAVSSICLGVSMCIFSSHLLFDEKIIDQTIDTRIKLAYALARQWFGIYITPEAPNDEWLLDGLAGFLTDLFIKKNLGNNEARYQRYKANCAVCRADDSGLTTLSSSSACKDLYGTQRIGIYGKIRSWKSVAILQMLEKQMGPESFRKILQNIVSRARDTASTSQSLSTKEFRQLANKIGNLERPFLKEFFPRWVESCGCPVLRMGFSYNKRKNMVEMAVSRECTVSPATSVENRDSDTGWPGMMSIRIYELDGVFDHPVLPMTGETWQLLEIQCHSKLAARRLQKTKKGSKPDGSDDNADIPALDVRSSVESPLLWLRADPEMEYLAEIHFHQPIQMWINQLEKDKDVIAQAQAIATLEMLPQPSFAVVNALNNFLRDPKAFWRVRIEAAVAMAKTASEDTDWAGLLNLIKFFKSQRFDADTGLPKPNEFRDFPEYFLLEAIPHAVAMVRTSDQKSPREAVEFVLQLLKYNDNNGNPYSDVFWLAALVQSVGELEFGQQSILFLASLLKRIDRLLQFDRLMPSYNGILTISCIRTLTQIALKLSGLLSLDRISELIRPFRDFSSMWQVRIEATRALLDLEYHCNGIDAALLLFIKYLEEESSLRGQVKLGVQVMRLCQIMRRSDSNDVVNNDTLVALLLLLEGQMAFNNVYLRHYLFCILQVLAGRPPTLYGVPREYKTLHMGDTGTCSEQKRMLTSLIPEFNPPEPSSVSAVAPMPYIPATLSSEPLHTPTLRPDSLAIPELSKEGGAIAEVPKQARAIAEAPREAASVSNSHERKLPVVKIKVRSSAATSRADADNLTTERSHAAPRETDVGPSSSVSVDAPQRNIAEATSISNHILEEVNSCHDRGSHMTASIGSAKLTSYGDELEKEFQCTADSSRAFGHFQPEDPSSSSIIQDNNIDADAQKYASLQTLSLPQHDHGLASSHSRHGKKEKKKKDKEKKRKREHKEHRNDPEYIERKRLKKEKKQKEKEMAKLLIEEVKPLPIAMPRIKEPPTKSTPVQLEANEPSGSRLIVGVHSKPEASEGTTSAAPKLRIKFKNRTLNNS 1185
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 37586988 37622295 + XM_039038723.1 Bhi08g01209 41542

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi08g01209 1185 Pfam Peptidase family M1 domain 108 306 IPR014782 GO:0008237|GO:0008270
Bhi08g01209 1185 MobiDBLite consensus disorder prediction 1086 1110 - -
Bhi08g01209 1185 MobiDBLite consensus disorder prediction 1057 1110 - -
Bhi08g01209 1185 MobiDBLite consensus disorder prediction 421 441 - -
Bhi08g01209 1185 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID 2 1115 IPR037813 GO:0005669
Bhi08g01209 1185 SUPERFAMILY ARM repeat 271 737 IPR016024 -
Bhi08g01209 1185 Gene3D tricorn interacting facor f3 domain 1 78 IPR042097 -
Bhi08g01209 1185 MobiDBLite consensus disorder prediction 922 962 - -
Bhi08g01209 1185 SUPERFAMILY Leukotriene A4 hydrolase N-terminal domain 1 79 IPR042097 -
Bhi08g01209 1185 Gene3D Neutral Protease Domain 2 84 336 IPR027268 -
Bhi08g01209 1185 MobiDBLite consensus disorder prediction 1127 1147 - -
Bhi08g01209 1185 Coils Coil 1096 1118 - -
Bhi08g01209 1185 MobiDBLite consensus disorder prediction 1064 1085 - -
Bhi08g01209 1185 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 95 341 - -
Bhi08g01209 1185 MobiDBLite consensus disorder prediction 424 438 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi08g01209 K03128 TAF2; transcription initiation factor TFIID subunit 2 - csv:101210662 2132.07
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi08g01209 Bhi-Chr8:37586988 Bhi09g03121 Bhi-Chr9:80027554 1.59E-10 dispersed
Bhi08g01208 Bhi-Chr8:37586480 Bhi08g01209 Bhi-Chr8:37586988 0 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g367 . . . . . . . . Cmo13g01082 . . . . . . Cpe20g00107 . . . . . . . . . . . . . . . Cone2ag0646 . . . Lsi02g00164 Csa01g00648 Chy12g01454 Cme12g01894 . . . Bda14g00912 . Bpe15g00546 Bma03g00887 . . . . Cma13g01041 . Car13g00873 . . . Bhi08g01209 . . Lac10g0216 . . . Cla04g01110 Cam04g1162 Cec01g1673 Cco01g1719 Clacu04g1190 Cmu04g1170 Cre01g1467 . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0010321 1 2 1 1 1 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32