Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi08g01233 TTCATTATCCAAAAACACAAAGTTGGGCCTTGAAAGTTTTGGTTTAAAACATTCTCCATGGCTGAGTTCACTCCAAACTTTCAAAGCTTAAATCAATCATCTTTTCCTCTAATGGATAATCCCAACCAAAATCCAACTCTACTTCATAACCCAAAAGTTAATATTCTTGACAACAACATTCCTGTTTTGTTCAATGACAGTTTCTTTAGCAACCAAACTGTTGCTCATCCTCCTCCTAGATTCCTGGAAAATTGGGCAGAAAATTTCCAAGGATTTTTCTGTCAAGCCAATCAAATCACTCCTAGTTCACCTGTTTTTGAGCCTACCCATCCACTTGGAAATGATCTCCATGGAAGCAAGAAAAGAAAGCTTGAAACTGATGCATATGAAAGCAGCTCTGGCAACTCAACCCCTCAAATTTCTGAAAATGGGATCAAGACAAAAAATAATGCTGGAAAAGGAAAGCGGTCCAAAAAGGGTGACGAAAACGACGGCGAGAATCCGAGGGAAGTGGTTCATGTTAGAGCCAGAAGAGGTCAAGCAACAGATAGTCACAGTGTAGCAGAAAGGATAAGAAGAGGAAAAATCAATGAAAGATTGAGATGTTTGCAAGACATTGTCCCAGGTTGTTACAAGACAATGGGAATGGCAGTAATGTTGGATGAGATAATCAATTATGTACAATCTTTGCAGAATCAAGTTGAGTTTCTTTCTATGAAACTCACAGCTGCAAGCTCCTATCATGACTTCAACTCAGACTCAGATGCTGAAGACAAATTGAAGGCAAAGGAAATAAGAGAAGGAAATGGAGGATTACTGGTTGCATCAGCTCAACTTGGTCCTTTTGACTTGAGCTTTGGTTCTTATTCAACATTGCCATTCAACACCATATGATCAACCAACCTTAGCTTAGAGCTCCTATATTAATTATTATTCTTCATTTTTCCATGACCAATATTTGTTCCCACTTTAATTTATAAGCCATACTTAAAATTGATTTATCCTTGTAATCAACCTCTCATACATATGAGAATTTATTTTATGGATATATAAATGTAATGGGTAGTTTTTTAATATAATTTTATAAACATTGCCTT 1097 36.46 MAEFTPNFQSLNQSSFPLMDNPNQNPTLLHNPKVNILDNNIPVLFNDSFFSNQTVAHPPPRFLENWAENFQGFFCQANQITPSSPVFEPTHPLGNDLHGSKKRKLETDAYESSSGNSTPQISENGIKTKNNAGKGKRSKKGDENDGENPREVVHVRARRGQATDSHSVAERIRRGKINERLRCLQDIVPGCYKTMGMAVMLDEIINYVQSLQNQVEFLSMKLTAASSYHDFNSDSDAEDKLKAKEIREGNGGLLVASAQLGPFDLSFGSYSTLPFNTI 278
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 38241415 38243650 - XM_039039309.1 Bhi08g01233 41566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi08g01233 278 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 159 229 IPR036638 GO:0046983
Bhi08g01233 278 PANTHER TRANSCRIPTION FACTOR BEE 1 2 248 - -
Bhi08g01233 278 Gene3D - 158 230 IPR036638 GO:0046983
Bhi08g01233 278 SMART finulus 167 217 IPR011598 GO:0046983
Bhi08g01233 278 MobiDBLite consensus disorder prediction 110 131 - -
Bhi08g01233 278 MobiDBLite consensus disorder prediction 135 169 - -
Bhi08g01233 278 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 161 211 IPR011598 GO:0046983
Bhi08g01233 278 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 2 248 IPR024097 GO:0006355
Bhi08g01233 278 Pfam Helix-loop-helix DNA-binding domain 165 212 IPR011598 GO:0046983
Bhi08g01233 278 CDD bHLH_AtBPE_like 151 236 - -
Bhi08g01233 278 MobiDBLite consensus disorder prediction 105 169 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g03474 Bhi-Chr1:87815370 Bhi08g01233 Bhi-Chr8:38241415 1.58E-59 dispersed
Bhi04g01989 Bhi-Chr4:51525676 Bhi08g01233 Bhi-Chr8:38241415 2.16E-50 dispersed
Bhi04g01990 Bhi-Chr4:51525876 Bhi08g01233 Bhi-Chr8:38241415 3.53E-50 dispersed
Bhi08g01233 Bhi-Chr8:38241415 Bhi09g01292 Bhi-Chr9:31785094 4.04E-40 dispersed
Bhi01g03473 Bhi-Chr1:87815370 Bhi08g01233 Bhi-Chr8:38241415 8.96E-75 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1701 PF00010 HLH 5.40E-05 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi08g01233 - - csv:101213736 440.269