Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi08g01253 AATCCTCTGTTCATCTTCATGAGCCTTCTTCAGTGAAATGAAAACTTCCGTCCCTCTGTTCCTCTTCTCATTTTTCTTCACAATCGTGTGGTTTGATCTCCAGCTCTGTTTCAGCAATGACGCCAACGAGGAATTTAAAGCTTGCGCGGTGTACTACAACTGCGGAGATTTGGTTAACATCTCGTATCTGTTCTGGGGGAATGAGCGGCAGGAGTTTTGCGGTCGGCGAGAATTTGAGCTCAATTGCAAAGACAATAAAACCACTACGATTCAAATCAATTCTATGGAATATAACGTTGTGAGCATCAGCCAATCGGATCATAGAATGAGGATAGCAAGATCAGACCTCTTCGATGATTACTGCCCTAAAAACCAAATCAAAACGGCAACGTTGGATCATAATCTGTTCAAGTATTCTTCGAACAATCTGAATCTCTATGTCTGGTATGATTGTCCGGCGCTAGAGGGAATCCCGCGGGATTTCAGATTTGAGTGCGGTTGGGAAGAGGAAAGTAGCGGGAGAGCGAATTATGCTTTGGAGAAGAAGGATGCAATGAATTGGAGTAGAAACATGAGCGATTGTAGAATGAAAATCGAAGTTATAATTATAAAAGATGTATTGAAAGCAGGAGAAACGAACAGAACGGTGGTGGTGGAAAATGGAGTGAAAGAAGGGTTTGAAGTGGAAAACGGGGATTTGTATACCATAGCGTGCGAGGGATGCAAGGAATACGGCGGCGCGTGTAGTGGAAACGCGACTCAAGAGTTTCTCTGCATTTGTGGAAGTGGAGATGTAAATCCTTACGTTTGCAAAGGAGCCCCTCCTCCTGCAACACCAGCAAATGTTATATGGATAGAGCCCACCACAGAATCACCATATAACAATGACAGAAGGAAGCCGGCCATTATAGACTCCTTCAAGAACAAGCTTGGCCAAGGAGGATTTAGCACTGTCTACAAAGGAAGCCTACCAAGTGGATGTGATGTGGCTGTCAAACTTTTGAAACAATCCAGACAAGAAAATGGCCAAGATTTTATTAATGAAGTTGTTAGCATAGCAAAAACTTCACACATAAACATAGTCACACTTTTAGGTTTATGCTACGAACAAAACAAAAGGGCTTTGGTTTATGAATATATGCCTAAAGGCTCATTAGATAAGTACATATCCCACAACAGGCTGCAAGAAAATGATATGAAGTTGGATTGTAACACACTCTATAGCATTGTTATTGGAGTGGCACGAGGCTTAGAATACTTGCATTGCGGTTGCAACACAAGGATTTTACATTTTGACATCAAACCACACAACATTCTTTTGGATAGTGACTTTTGTCCCAAGATTTCGGACTTTGGACTTGCCAAGCAATGCGAGGCCAAAAAAAGTCATGTGTCGATGACAGGCGTGAAAGGAACGGTAGGATTCATTGCACCTGAAGTAATATTCAAGAATTTTGGTAAGATTTCTCACAAATCTGATGTTTATAGCTATGGAATGTTGGTTCTTGAAATGGTGGGAGCAAGAAAGAATTCCAATGATGGAGTGGAACAAAAGAGTGAAGAGTATTTTCCTGATTGGATATATAACAAACTAAGACAAAGTGAAATAGATGGAGGATGCTGGTGGGGAAACACAAAGGAAGAAGAAGAAATGACAAGAAAAATGATAATTGTAGGGCTGCATTGTATTCAGACATTGCCCGACGACAGGCCATCGATGACCAATGTGGTTGTGATGTTGGAAGGCAATGTTGATGCTTTACAGATTCCACCAAAACCCGACTTGTTCGGTCCTCCAGCCTTTGAGCAGCCTCAACCTTCTTCTTCTTCATCAACTAAATCCATAATGATAGTTTGATACTCTAGCAGAGAAGCATCACAACACCAATCATATTTACCTCAAATGAAGACTCTCAGATTTCATTTCTTTTTATCCTTTTGAGTAATCAATTGAGTAATTCAAACATGTATATGATTCGATGACATTCAGAAAACATATTTATAGGAGAAAATTTT 2016 40.58 MKTSVPLFLFSFFFTIVWFDLQLCFSNDANEEFKACAVYYNCGDLVNISYLFWGNERQEFCGRREFELNCKDNKTTTIQINSMEYNVVSISQSDHRMRIARSDLFDDYCPKNQIKTATLDHNLFKYSSNNLNLYVWYDCPALEGIPRDFRFECGWEEESSGRANYALEKKDAMNWSRNMSDCRMKIEVIIIKDVLKAGETNRTVVVENGVKEGFEVENGDLYTIACEGCKEYGGACSGNATQEFLCICGSGDVNPYVCKGAPPPATPANVIWIEPTTESPYNNDRRKPAIIDSFKNKLGQGGFSTVYKGSLPSGCDVAVKLLKQSRQENGQDFINEVVSIAKTSHINIVTLLGLCYEQNKRALVYEYMPKGSLDKYISHNRLQENDMKLDCNTLYSIVIGVARGLEYLHCGCNTRILHFDIKPHNILLDSDFCPKISDFGLAKQCEAKKSHVSMTGVKGTVGFIAPEVIFKNFGKISHKSDVYSYGMLVLEMVGARKNSNDGVEQKSEEYFPDWIYNKLRQSEIDGGCWWGNTKEEEEMTRKMIIVGLHCIQTLPDDRPSMTNVVVMLEGNVDALQIPPKPDLFGPPAFEQPQPSSSSSTKSIMIV 606
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 38651037 38656002 - XM_039038114.1 Bhi08g01253 41586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi08g01253 606 Pfam Protein kinase domain 295 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi08g01253 606 Pfam Wall-associated receptor kinase galacturonan-binding 36 101 IPR025287 GO:0030247
Bhi08g01253 606 Gene3D Phosphorylase Kinase; domain 1 287 367 - -
Bhi08g01253 606 ProSitePatterns Protein kinases ATP-binding region signature. 298 320 IPR017441 GO:0005524
Bhi08g01253 606 ProSiteProfiles Protein kinase domain profile. 292 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi08g01253 606 MobiDBLite consensus disorder prediction 590 606 - -
Bhi08g01253 606 PANTHER - 20 249 - -
Bhi08g01253 606 PANTHER - 290 601 - -
Bhi08g01253 606 SUPERFAMILY Protein kinase-like (PK-like) 290 569 IPR011009 -
Bhi08g01253 606 Pfam Wall-associated receptor kinase C-terminal 162 250 IPR032872 -
Bhi08g01253 606 PANTHER RUST RESISTANCE KINASE LR10-RELATED 290 601 IPR045874 GO:0004672
Bhi08g01253 606 PANTHER RUST RESISTANCE KINASE LR10-RELATED 20 249 IPR045874 GO:0004672
Bhi08g01253 606 Gene3D Transferase(Phosphotransferase) domain 1 368 576 - -
Bhi08g01253 606 ProSitePatterns Serine/Threonine protein kinases active-site signature. 416 428 IPR008271 GO:0004672|GO:0006468
Bhi08g01253 606 MobiDBLite consensus disorder prediction 581 606 - -
Bhi08g01253 606 SMART serkin_6 292 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi08g01253 Bhi-Chr8:38651037 Bhi08g01256 Bhi-Chr8:38656998 4.20E-177 dispersed
Bhi08g01252 Bhi-Chr8:38637405 Bhi08g01253 Bhi-Chr8:38651037 0 tandem
Bhi08g01253 Bhi-Chr8:38651037 Bhi08g01254 Bhi-Chr8:38651037 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
87957 PF00069 Pkinase 6.00E-49 CL0016 Bhi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi08g01253 - - cmax:111495731 842.032