Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi08g01255 AATTGAAATTGGATTTTCTTTTCGTTGGTCTTTTTTTTAATAACGAACATACATGCACCTTAATATTCAGTCATTTAAAAAAAATTCAAGATGTTGAGTTTATATTAAAAGATCAAACCAAATTCAGTGAATTGGTCTGCCTCCAAGTCAATATTTGAATTCTCTCTCTATTACTAGGGACACTTATAAATATAACAATTAAATCCAATATATTTATATATATAATACAATATATATATTTTTTAAAATATCAAAAATTAGATCCAACTCTTAAGGTCTATCAACTTAAATTAGTCTATCACTAATAGTGACAAAGTCTATCACTGATAGATTTTGCTATATTTGTAATTCTTTAAAAATATTGTTATACACTTAATTATTAACCATATATATGTTACCCATTATAATTATTCCTTTTTCTAATGCTCTATCCTTATAATGAAAAGCCTCCAAATTGGGAGTGATACAAGCTTTTAATATTTTAATCATCCTATTTGCTAAAAATATTTTTTTAAAGTTAAATTACAAATTAGATTCAATAGTTTGGAGAGAGTTAAAATTTAGTCACAGAAACCATCCTCAAGGATTATAAGACTTAAGCCATAGAGGCATATTATTAGTTCACAAACCACCCTCTACATTAGAAATAGTCCACCCAGCTAACTTGTGAGCCACCATATTACAAGAACTAGAAATGGATTGAAATCCCAAAATATGAATTCAAATAATCCAATCTTTGATCTCTTCCAAAATAACCCCAAATTGAGAACGAGTCATAGATTTCTCATGAATGACCTTAACAAAAGTTTGGGAATCAAATTTAACCCATTCATTTGAGAAGCCCATTTCACCTACTAATTTAAGCTTAAACAGGAGGCCGCAACATCTATTGAGATGTCTTGAAAATTCGAAGCAACCATCATAGCCATTCCTTAAAAATCACGAAATATTACTCTTAACCCCGTTCTAACATCTATGTCTAGTAATTTCAATGGTTTGATAAAACCCTTATACATAGTCTACATATAATATGAAAGTTTTTATCAAATCATGGTAAATTCTAACCTATAATCATAAGAAATAAATTTATAATTTAATCGATTATTTGTATGTACGTGTTTGTTTGGTTAACTTGTTGGACAATGCAAAAAAGAAGTGAAAAAAAGTCGTATCTACTTCGGTGCCTGTCCTTCTCCAATCTCCACATTCCTCCTTTTGTTCCTGAAATGTAAGTCAAATGTTTCCCATTCTAAAGGGTTGTTTGGTAAACAAGGCTTCTACTATTACCGTTCTACCCTTTTATGACGTCACTACTGCATATACAAAACCTAAGCAGCTTTGATTTAATTGCCCAAGGTCTTCCCATTCTTTTTTTCCGTTTCTTTCACCGATTTCATTTCATCGCTTTGTTTAATTCTTCGAAAAAATTCTTTAATAGTCCTTTGAAATTTGACTGGAAGCCTAAATTACAATTTTCTATTGTAAGAAAATTCAGTACTTTACTCTTCCTTCAATTAAACTTCAACAAATGAATTATGAGAAAATAACCGAACTTTATGTTTGAATATTTTTTCATACGTGCAAAACTTCTAGTCAATTTTTTACCCACTTCTTCCAAATTTAGATTAATCTTTTCCCATTCTGCATGACCAAACTTCTTCCAAGTCTTCTTTTTAGTGTTTTAAATTGTAGTGGTGACCTATAACCGACCTTTCATGATCATATTTTGCCGCCCAAGTTGACCATTTTTTTTATAGCCAAAGTTTCTCTTGATTTCCTCTATTACAATTTCATCCAAATATTGGAAGCAACGTACATCTTATGCCACAAAATTCTCAAAAAGCAATCTTGTGATCTTTCCCATTTGGCCCACCTCCAAGTCTTCTGAATGACTTCTAAACTTTGCTTTTGCTTAAACCATGATTTGTCTTTTCTCTTCCTTTTTCCAAACATCATTCACAAAACCAAAACACAAAGATTTCAAGAACTTAAAACAAGAAACAACCCCCCCAAATCTAATTCAAACAGGGTTGGTTTAACTCACCAAACACACTGGAAATTTCCTTCACAAAACCTCCCTCCATTTTCCCAACTTTCTTCTTCTTCTTCTTCTTCTTCTGGTATATTCTTACTTCATTCTATTCATTCCATATATGGATTTCAAGAGAACCCCTTTTCTTATTATCATCTTCTTCATCATCTTTACTCGCCAAACTCTGTCCTTAGACCAAAAGTTTGAAGCTTGTGCTCCAAAATCCTGTGGGAAAGGTCCAAATATAAGCTATCCTTTCTGGATAGCTCATTTGCATGGCCCCTTCTGTGGATTCCCAAGCTTGGATATTGCCTGCAAAGATGAAAACCCAGTTATCAGAATTTCAAATGATGATTATATTATCAGAGAAATTTCCTACCAAAACCATTCTTTTCTTTTGACAAATGCTGCGGTTTACAATGTGAATTGCCCAACTCCTCTTCATAATTTCAGCCTCCACCGAACCCCATTCACTTACAGTTCGGATCATATTGGTTTCTTCTTCTTCTACAACTGTACTTCCCTTCCTCCCAACTATAGCTACCCAATTGACTGTTCAAGCACAAGCAAACTCCATTCTTTTGCTGCTTTCCATGATGGATTTTTGGAGTTTATGAACTTCTCTTCCAATTCTTGTCAATCCTCTGTTGAGGTGCCTGTAGACGTTAGTAATGAGGATGATGATTTTTCTGGGTTGTTGAGGAAGAGTTATTCTGGTGTCTTGAAGATGGGATTCAGTTTAAATTGGAATGCCCAAAATTGTAGCAACTGTGAGACAAGTGGTGGTCGTTGTGGGTTCGAAAGGAACCAGTTTGTTTGCTTTTGTCCTGATGGACCTCATCTAAAAACCTGCCAAGAGGGAGAAAGTAAAAAATGGAAAAAGGCCGTCATAGGTGTTTGCATTGGTATTGGAGGTATGCTGTTAATGAGTGTAGCCTTTTTCATCTGGTTTTGTTTGCACAAAAAGAAGCTTGCTCGTTCTTATACTCCCTCCTCCTTTCTCCTACGAAACATTTCTTGTGAACCTTCAACAAAGGAACTTGAGAAAGGAGAAAATGACATGGGGCTACCTTTGTTCTCTTATGAAGAGCTGGAAAAAGCCACAGACAGATTTAATCCAGCCAAAGAACTTGGAGATGGTGGCTTTGGCACCGTCTACTATGGCAAACTTCCAGATGGGCGTGAGGTTGCAGTGAAACGATTGTTTGAAAATAACTACCGACGAGTTGAGCATTTCATGAATGAAGTTGAGATCCTTACTCGTTTGCGTCACCCACATCTAGTCACCCTTTATGGATGCACCTCTCGACATTGCCGTGAACTCTTGCTGGTTTATGAATTCATTCCAAATGGTACTGTTGCCGATCATCTTCATGGCAACCGAGCAAAACCTGGTGAGCTTCCATGGCATACAAGGTTGAAGATTGCCATAGACACAGCAAGTGCTCTGGCTTTTCTTCATGCTTCTGAGACCATCCACCGTGACGTTAAAACCACCAACATTCTCCTTGACAACAACTACAATGTTAAAGTCGCTGATTTTGGACTATCTCGCCTTTTTCCTACCCAAGCCACCCATGTTTCAACTGCTCCACAAGGAACACCAGGCTACGTGGATCCAGAGTATCACGAATGTTATCAACTTACAAATAAAAGCGATGTCTTTAGCTTTGGAGTAGTATTGGTTGAGCTGATATCTTCAAAGCCTGCAGTTGATATCACTAGGCACAGACATGAGATTAACTTGTGGACAATGGCGATCAACAAGATTCGAAATGACGAATTACATGACTTTGTAGATTCATCTCTTGGATTTGAAACGGATGAAACTGTAAGAGATATGATATGTGCAGTTGCAGAGTTGGCATTTCGATGCTTGCAAAGTGTGAAGGATACAAGGCCGTCGATGTTGGAGGCTCTGGAAATTCTTAAGAACATAGAGAGTCGAAGTAGTGGCAGAGGAAAAGAAGACATAGATATTTCAGGAGAAGATGATATGCTGCTGAAGGATGGTTTAGTGCCAGAGTCCCCAGATTCTGTTGTCGTACCTTGGATGAGCAAATCTTCAACACCAAATGGCAGTGGCTAAGTTTGTGCTTTATGGGTTCATGGTAAAATAGCACTGCCTAGTCTTTTTTGTTCTTCCACCCATTATTATAAGCTTCCTCAACCCTTTTTAGGTTGAGTCAGATGTACATATTTGAGATTGAATGTAAAGCTCGCGTTGTTATTCTCCATCCACTTCTTCCCTCGTTTGACTGCTCATGATAGAAGTAAAAGAAGAAAATTATGCAGGAAAGAAATATGTTGATAATGTCCAAGTTTACACTATAATAATAAAGATTGTAATGAATGAAAGAACAGA 4397 35.91 MDFKRTPFLIIIFFIIFTRQTLSLDQKFEACAPKSCGKGPNISYPFWIAHLHGPFCGFPSLDIACKDENPVIRISNDDYIIREISYQNHSFLLTNAAVYNVNCPTPLHNFSLHRTPFTYSSDHIGFFFFYNCTSLPPNYSYPIDCSSTSKLHSFAAFHDGFLEFMNFSSNSCQSSVEVPVDVSNEDDDFSGLLRKSYSGVLKMGFSLNWNAQNCSNCETSGGRCGFERNQFVCFCPDGPHLKTCQEGESKKWKKAVIGVCIGIGGMLLMSVAFFIWFCLHKKKLARSYTPSSFLLRNISCEPSTKELEKGENDMGLPLFSYEELEKATDRFNPAKELGDGGFGTVYYGKLPDGREVAVKRLFENNYRRVEHFMNEVEILTRLRHPHLVTLYGCTSRHCRELLLVYEFIPNGTVADHLHGNRAKPGELPWHTRLKIAIDTASALAFLHASETIHRDVKTTNILLDNNYNVKVADFGLSRLFPTQATHVSTAPQGTPGYVDPEYHECYQLTNKSDVFSFGVVLVELISSKPAVDITRHRHEINLWTMAINKIRNDELHDFVDSSLGFETDETVRDMICAVAELAFRCLQSVKDTRPSMLEALEILKNIESRSSGRGKEDIDISGEDDMLLKDGLVPESPDSVVVPWMSKSSTPNGSG 655
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 38656870 38661628 - XM_039038112.1 Bhi08g01255 41588

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi08g01255 655 MobiDBLite consensus disorder prediction 629 655 - -
Bhi08g01255 655 SUPERFAMILY Protein kinase-like (PK-like) 314 606 IPR011009 -
Bhi08g01255 655 Pfam Wall-associated receptor kinase galacturonan-binding 31 93 IPR025287 GO:0030247
Bhi08g01255 655 ProSitePatterns Protein kinases ATP-binding region signature. 337 359 IPR017441 GO:0005524
Bhi08g01255 655 ProSiteProfiles Protein kinase domain profile. 331 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi08g01255 655 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 9 646 IPR044652 -
Bhi08g01255 655 Gene3D Phosphorylase Kinase; domain 1 303 407 - -
Bhi08g01255 655 SMART serkin_6 331 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi08g01255 655 Pfam Wall-associated receptor kinase C-terminal 166 238 IPR032872 -
Bhi08g01255 655 Pfam Protein tyrosine and serine/threonine kinase 334 601 IPR001245 GO:0004672|GO:0006468
Bhi08g01255 655 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.2 9 646 - -
Bhi08g01255 655 Gene3D Transferase(Phosphotransferase) domain 1 408 624 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi08g01255 - - - csv:101208057 850.892
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g03456 Bhi-Chr1:87664287 Bhi08g01255 Bhi-Chr8:38656870 0 dispersed
Bhi07g01296 Bhi-Chr7:39846396 Bhi08g01255 Bhi-Chr8:38656870 2.06E-162 dispersed
Bhi08g01251 Bhi-Chr8:38592044 Bhi08g01255 Bhi-Chr8:38656870 8.00E-120 dispersed
Bhi08g01255 Bhi-Chr8:38656870 Bhi08g01252 Bhi-Chr8:38637405 0 dispersed
Bhi08g01255 Bhi-Chr8:38656870 Bhi08g01256 Bhi-Chr8:38656998 0 tandem
Bhi07g01636 Bhi-Chr7:46188129 Bhi08g01255 Bhi-Chr8:38656870 6.71E-95 transposed
Bhi08g01245 Bhi-Chr8:38484467 Bhi08g01255 Bhi-Chr8:38656870 0 transposed
Bhi01g03455 Bhi-Chr1:87662325 Bhi08g01255 Bhi-Chr8:38656870 2.35E-178 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g289 . . . Bda15g00513 . Bpe13g00359 Bma06g00049 . Cmo13g01055 . Cma10g00308 Cma11g00286 Car10g00292 Car11g00260 . . . . . . . . . . Cla06g01453 . . . . . . Cone11ag0305 Cone18ag1190 Cone2ag0439 Cone16ag0560 Lsi02g00194 Csa01g00680 . Cme12g01864 . . . . . Bpe15g00530 Bma03g00899 Bma08g00058 . Cmo10g00329 Cmo11g00288 Cma13g01013 . Car13g00846 . . . Bhi08g01255 . . . . . . Cla04g01079 . . . . . . Lsi06g01317 Csa01g00398 Chy02g02350 Cme02g01727
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000799 2 5 1 3 2 2 3 4 2 2 2 2 4 3 3 4 2 1 3 2 3 1 2 3 1 3 1 1 3 3 73
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
87959 PF07714 PK_Tyr_Ser-Thr 7.10E-46 CL0016 Bhi PK
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bhi08g01255 Bhi_Chr08 FPKM 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0