Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi08g01290 TCGTCACGTCGTTTTACAATCACTACTCCCAAAAACCCACAATACCAAAAAAACCCAACCCCCTCTCCCCAGAATTCCACGCCCCTTTCTTCCTTTTCTTTTCTTCATCTTCTTCTTCCCTTCTCTCCACGCTTTCCCTTTCCATTTCATTATATCTTACATTCCATAACACTTAACCATGTGGATGATGGGTTACAATGACGCTCCAGATCATTTTAACTTTCCTTCTGATAACTCTTTCAATTCTCGCAAACTTAGACCTCTCGTTCCTCGCCCTCTCCATTCTTCTTCTTCTTCTTCTTCTTCCTCCATTAATACTAATCCTCCCTTCAATCTCATCCACACAAACGATTTCTTCTCCCAATTTCATCACATGGCGACAGTAACTGATCAGAATAAGAGAGAGTTGAACAATGTGACGCCGTCGCCGCCTGTGGTAGTGAGCTCGCGGTGGAATCCGACGCCTGAGCAGTTGAGAGTGCTGGAGGAATTGTATCGGCGGGGGACTCGAACCCCGTCCGCTGATCAAATTCAACATATCACTGCTCAGCTTCGTCGTTACGGTAAGATTGAAGGTAAGAATGTGTTCTATTGGTTTCAAAATCATAAAGCTAGAGAGCGACAGAAACGCCGTCGCCAGATGGAATCCGCCATCTCTGCCGCTGACCTCGATATCCTTGAAAGGAAAGATTCAGGGTCGGGCAGGACAGTGTATGAAGAACAGACCAAAAACTGGATGCCCTCTACAAACTGCAGTACACTTCCTGAGGAATCTGTTCCAATTCAAGGGGCAGCAAAAAGTAGTGTAATGGGAGAAGGAGATTGCAGGACAGAAAACGAATGGATTCAGTTTGAGGAATTGCACCAAATAAGAAATAACAACACCACCAACAACGACAACTTTGCTGAAAAGAATAGCAATAACATCAACAACAACAATAACAACAATCCAGCCTCCTTGCAATTGATGCATTGTCCGGCAGCCGCTCTCCGCAATGGCAGCGGTGGTGGTGGAGGCGGTGGCCAACTGATGATGAACATTGCCCCCATCACCACCACAGCCACAGTGACAACAATAATGCATCCAAAATCTCATAGAAGAAGTAATTTTAATACTGTTGGGGTTGAAGAATCGGAAGAAATAGGAGGAGAAGAAGAAGAAGGGTGTGGAGAATCTGAAACCCTACAACTTTTTCCATTATGCAGTGAGACAAGAAATGGAGAGATTATTGGAGTCAAAAATGGGTGTGAAACAGTGGAAAATTCAAGCATGAATAGTACTAATCTGACTCCACTTCAGTTCTTTGAATTCCTTCCTTTGAAGAATTGAACCTTTTTTTTATTTTAGCTGCTTCACATCTAGGGTTAATTACATTAGAGTGTTTAAAGTAAAGTTCTTGTAGTTACTATATAGATTCTTGGTTTCTTTAATTCCCTCCCAACTTTTCTATTTACGTACGTAAAAGTTGATGGGGTTTGTGTTTTAAGATGTTTTATGGATGGATATTGGACAACACTTTCATTCA 1526 42.4 MWMMGYNDAPDHFNFPSDNSFNSRKLRPLVPRPLHSSSSSSSSSINTNPPFNLIHTNDFFSQFHHMATVTDQNKRELNNVTPSPPVVVSSRWNPTPEQLRVLEELYRRGTRTPSADQIQHITAQLRRYGKIEGKNVFYWFQNHKARERQKRRRQMESAISAADLDILERKDSGSGRTVYEEQTKNWMPSTNCSTLPEESVPIQGAAKSSVMGEGDCRTENEWIQFEELHQIRNNNTTNNDNFAEKNSNNINNNNNNNPASLQLMHCPAAALRNGSGGGGGGGQLMMNIAPITTTATVTTIMHPKSHRRSNFNTVGVEESEEIGGEEEEGCGESETLQLFPLCSETRNGEIIGVKNGCETVENSSMNSTNLTPLQFFEFLPLKN 383
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 39357629 39360794 - XM_039037862.1 Bhi08g01290 41623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi08g01290 383 Pfam Homeodomain 90 149 IPR001356 GO:0003677
Bhi08g01290 383 MobiDBLite consensus disorder prediction 33 47 - -
Bhi08g01290 383 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 52 383 - -
Bhi08g01290 383 SUPERFAMILY Homeodomain-like 90 156 IPR009057 -
Bhi08g01290 383 Gene3D - 88 149 - -
Bhi08g01290 383 CDD homeodomain 91 151 IPR001356 GO:0003677
Bhi08g01290 383 MobiDBLite consensus disorder prediction 24 47 - -
Bhi08g01290 383 SMART HOX_1 87 154 IPR001356 GO:0003677
Bhi08g01290 383 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 52 383 IPR044555 GO:0003700|GO:0099402
Bhi08g01290 383 ProSiteProfiles 'Homeobox' domain profile. 95 150 IPR001356 GO:0003677
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bhi02g00135 Bhi08g01290 CCT
Bhi02g00135 Bhi08g01290 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g00872 Bhi-Chr3:16214180 Bhi08g01290 Bhi-Chr8:39357629 1.28E-27 dispersed
Bhi03g00873 Bhi-Chr3:16214180 Bhi08g01290 Bhi-Chr8:39357629 1.33E-27 dispersed
Bhi04g00375 Bhi-Chr4:9164651 Bhi08g01290 Bhi-Chr8:39357629 4.59E-28 dispersed
Bhi09g02871 Bhi-Chr9:75625226 Bhi08g01290 Bhi-Chr8:39357629 7.19E-14 transposed
Bhi10g00633 Bhi-Chr10:13739913 Bhi08g01290 Bhi-Chr8:39357629 2.09E-29 transposed
Bhi11g02705 Bhi-Chr11:72529669 Bhi08g01290 Bhi-Chr8:39357629 9.63E-15 transposed
Bhi02g00135 Bhi-Chr2:2560364 Bhi08g01290 Bhi-Chr8:39357629 1.45E-53 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1703 PF00046 Homeodomain 1.50E-19 CL0123 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi08g01290 - - csv:101209268 520.39