Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bhi08g01295 | CCTCACCTTCAATTTTTTCTTTTTCTCATTTTTCTCCCCAACAACAGTAAAAATAAAAACAAAACCCCATCATTGGAAATTTTGGAGAAAGGGGAATTAGTGGTTTTCTTTTTCTTTTTTGTTTCCTACAAAATTGAAGGCGAGCTGGTGACCGGAAACCTTCTCAACTAGTTTGTTTTATAATTTGAGTTGGAAATTAAAAAAACAAAAAAACAAAAAAAGAGAAGGGGAGAGAGAAAAGTTTTATATTATTTGATATTATATAAAGAGAGAGAGAGATGGGGGATTCACCAAAAAGTCCAGAGAGCAGCAGTGGCGGTGGTGGAGGGCGTTGTTCGTCGTCATTAATGGAAAGTTTATTGGGTCTTCTTCGGATTCGGATCATTCGCGGCGTCAACCTCGCCGTTCGCGACGTTCGCAGCAGCGATCCTTACATTGTTGTTAAAATGTCCAAACAGAAATTGAAGACTCGAGTGATTAAGAAGGATATTAATCCAGAATGGAACGAAGATCTTACTCTATCTGTTACAGATCCCAATGCTTTGGTCAAGCTGACAGTGTACGACCACGACACATTTAGTATGGACGACAAAATGGGTGATGCAGAGTTCGATATCACGCCATACATCGAAGCATTGAAAATGGATTTGTCAGGATTACCAAGTGGAACAATAGTGTCAAGAGTGCAACCAAGTAGGCAAAATTGCCTAGCCGAAGAGAGTGCCATTGTGTTGGAAGATGGCAAAGTTGTTCAAAACATTTGCCTACGCTTGCGCAATGTTGAATGTGGTGAAGTCGAAATTCAATTGCAATGGATTGATCTTCCTGGTTCTAAAGTTGCGTTGATCACGAGCACGTCGACATGGTTGGAAGTGAGAGGCAACGATTCGATTCAAAGTAGTACGGATGTGGAGCGTTTTGAGAGGTTACCTGCAAAAACAAAGAAGCTTTGGACACCCGTGTGGCGTTTACCAGGCATATTTCATTATGTAAATCGCTTCAAGTCTAAACTTCTTCTTCAACGTTGTCTATATAAGAAATGAAGCGTGTTGCCATTATATATA | 1064 | 40.13 | MGDSPKSPESSSGGGGGRCSSSLMESLLGLLRIRIIRGVNLAVRDVRSSDPYIVVKMSKQKLKTRVIKKDINPEWNEDLTLSVTDPNALVKLTVYDHDTFSMDDKMGDAEFDITPYIEALKMDLSGLPSGTIVSRVQPSRQNCLAEESAIVLEDGKVVQNICLRLRNVECGEVEIQLQWIDLPGSKVALITSTSTWLEVRGNDSIQSSTDVERFERLPAKTKKLWTPVWRLPGIFHYVNRFKSKLLLQRCLYKK | 254 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 39537215 | 39540427 | + | XM_039039286.1 | Bhi08g01295 | 41628 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bhi08g01295 | 254 | Gene3D | C2 domain | 25 | 195 | IPR035892 | - | |
| Bhi08g01295 | 254 | Pfam | C2 domain | 29 | 115 | IPR000008 | - | |
| Bhi08g01295 | 254 | PANTHER | PROTEIN C2-DOMAIN ABA-RELATED 4 | 16 | 187 | IPR044562 | - | |
| Bhi08g01295 | 254 | SMART | C2_3c | 30 | 125 | IPR000008 | - | |
| Bhi08g01295 | 254 | ProSiteProfiles | C2 domain profile. | 1 | 126 | IPR000008 | - | |
| Bhi08g01295 | 254 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 27 | 114 | IPR035892 | - | |
| Bhi08g01295 | 254 | PANTHER | PROTEIN C2-DOMAIN ABA-RELATED 4-LIKE | 16 | 187 | - | - | |
| Bhi08g01295 | 254 | CDD | C2_ArfGAP | 28 | 171 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bhi02g00145 | Bhi-Chr2:2693294 | Bhi08g01295 | Bhi-Chr8:39537215 | 1.28E-92 | dispersed | |
| Bhi08g01295 | Bhi-Chr8:39537215 | Bhi12g00911 | Bhi-Chr12:27444596 | 2.64E-73 | dispersed | |
| Bhi01g01975 | Bhi-Chr1:44212987 | Bhi08g01295 | Bhi-Chr8:39537215 | 3.39E-84 | transposed | |
| Bhi03g00156 | Bhi-Chr3:3899552 | Bhi08g01295 | Bhi-Chr8:39537215 | 1.33E-43 | transposed | |
| Bhi06g01004 | Bhi-Chr6:27535333 | Bhi08g01295 | Bhi-Chr8:39537215 | 1.19E-38 | transposed | |
| Bhi07g00356 | Bhi-Chr7:15876498 | Bhi08g01295 | Bhi-Chr8:39537215 | 7.86E-64 | transposed | |
| Bhi08g00703 | Bhi-Chr8:23729838 | Bhi08g01295 | Bhi-Chr8:39537215 | 1.48E-39 | transposed | |
| Bhi08g01031 | Bhi-Chr8:33662101 | Bhi08g01295 | Bhi-Chr8:39537215 | 8.75E-39 | transposed | |
| Bhi02g00144 | Bhi-Chr2:2693294 | Bhi08g01295 | Bhi-Chr8:39537215 | 1.88E-66 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bhi08g01295 | - | - | csv:101220577 | 408.683 |