Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi08g01320 AAGAAGTAAAGAGAGAAAGGAAAGCTGAGATAAAGCCTGGGATATAAAAAAAAGCTGATCCAAAAAGCTGAAATTTTTAAAAGCCCATTAATTTATTAAACAAAAGCTGAAAGCCAAAAAAAAAATAAATAAATAAATAAAACCCATCCCCTCTTTCTCTCTCCTCTTCTTCTTACTTCTCTCTCTCTCTAACCCACCTAATTTATCATCTCAAATTTTCAATTACTTCAAACTCCCCTTTCATTTCATTTTCTTCTTCTTCTTCTTGAAATTTTTTGCTCTCAAGTCCTCTAATTCATTCTCTCTTTCATTTGAAGCTCTTTGTTTTTTTTTTCTTTTCTTCTTTTCCCATGCTGGCTGATCTCTCTTCTCCTTCACTTCCTTGTTTTGAGCCTTTGTCTAATTGCTTTGAAAACAATGGAACCAATAACAAAAGAAAACGGAGACCCGCCGGAACTCCAGACCCAGATGCTGAGGTGGTTTCTCTCTCTCCAAAAACTCTATTGGAATCAGATCGTTACGTGTGTGAGATCTGCAATCAAGGGTTTCAGAGAGATCAGAATCTACAAATGCATCGACGTCGGCACAAGGTGCCGTGGAAGCTATTGAAAAGAACGGAGACGACGACCGTAGTGAGAAAACGAGTGTTTGTTTGCCCGGAGCCGAGCTGCTTACACCATAACCCTACTCATGCTCTGGGGGATTTGGTAGGAATAAAGAAACACTTTAGAAGAAAACATAGTAACCATAAGCAATGGGTTTGTGAAAAATGCTCTAAAGGATATGCTGTTCAATCTGATTACAAAGCTCATCTCAAAACTTGTGGAACTAGAGGCCATTCTTGTGATTGTGGTCGGGTTTTCTCCAGGGTGGAGAGTTTCATAGAACACCAAGATAATTGCAAATTGGGTCATCATCAACAACAATCAGAACAAAAAATTCCATGTTTATCTAGAACAGCTTCAAGTCCAACTCCAAGCCCTTCTTCAGATACAAATTTCAGCTTCTTAAACCAAAACCAGACATTTACTACAACAATTGATCATCATCATCATGGAGCTGAAAAATATTCTACAAAAACAACAATAATTCCCCAAAGAAGTATTAACCATAATCATCATCAAAATTTAGACCTTCAACTTTCCACCAATTCAACTTCCATTCATGTTTCAGTTTCTCCAAAAAGACATGAAAATTACTCAACCCATTTGCAACTTTCCATTGGTTCTTGCAATTATGGTGAGAAAAATGAAGATAACAATAGCAACAACAATGATGATGATGATGAGAAATTGGGGTTTCTGAGGCTGAAAGAGGAAGCTAAAGAGCAAATGAGAGTGGCAATGGAAGAGAAAGCTGTGGCTGAAGAAGCAAGAAATGAAGCTAAGAAACAGATTGAATTGGCTGAAAAGGAGTTAGTGAATGCCAAGAGAATGAGACAACAAGCACAAGCTGAGTTACAAAGAGCTCTTGCTTTGAAAGAACATGCCATCAAGAAAATCAACTCCACCATCCTCCAAATAACTTGCCAAGTTTGTAGGCAACATTTTCATCCCTTGCCTAAAATTTGAATATTCCTCCTATCGTTATGGTTGTTGTTGTCGTTTTAATGAGATAAATTTTACGATTCGTATAGAAAAACATTTTCACTTCCTTATAATTGCTTACTATACATTGTTTGAGACAATCATCTCATCTAAGAAAAAAAAAAAAAACATACAAACAAGTTGAGATTTCAATATCTTAATCTCTCATATTGATCCCAATTATATCTAATAGAATACAAAATTTAGTTTGTGTAA 1802 36.02 MLADLSSPSLPCFEPLSNCFENNGTNNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRTETTTVVRKRVFVCPEPSCLHHNPTHALGDLVGIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDNCKLGHHQQQSEQKIPCLSRTASSPTPSPSSDTNFSFLNQNQTFTTTIDHHHHGAEKYSTKTTIIPQRSINHNHHQNLDLQLSTNSTSIHVSVSPKRHENYSTHLQLSIGSCNYGEKNEDNNSNNNDDDDEKLGFLRLKEEAKEQMRVAMEEKAVAEEARNEAKKQIELAEKELVNAKRMRQQAQAELQRALALKEHAIKKINSTILQITCQVCRQHFHPLPKI 406
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 40147620 40150458 + XM_039039102.1 Bhi08g01320 41653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi08g01320 406 SMART c2h2final6 136 163 IPR013087 -
Bhi08g01320 406 SMART c2h2final6 57 79 IPR013087 -
Bhi08g01320 406 SMART c2h2final6 100 130 IPR013087 -
Bhi08g01320 406 PANTHER OS03G0310200 PROTEIN 14 401 IPR039288 GO:0009630
Bhi08g01320 406 SUPERFAMILY beta-beta-alpha zinc fingers 56 156 IPR036236 -
Bhi08g01320 406 Coils Coil 321 383 - -
Bhi08g01320 406 MobiDBLite consensus disorder prediction 23 43 - -
Bhi08g01320 406 PANTHER PROTEIN INDETERMINATE-DOMAIN 16-LIKE 14 401 - -
Bhi08g01320 406 ProSiteProfiles Zinc finger C2H2 type domain profile. 57 79 IPR013087 -
Bhi08g01320 406 MobiDBLite consensus disorder prediction 195 219 - -
Bhi08g01320 406 Gene3D Classic Zinc Finger 35 100 - -
Bhi08g01320 406 ProSitePatterns Zinc finger C2H2 type domain signature. 59 79 IPR013087 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi08g01320 Bhi-Chr8:40147620 Bhi08g01969 Bhi-Chr8:56800257 5.88E-169 dispersed
Bhi08g01320 Bhi-Chr8:40147620 Bhi11g02110 Bhi-Chr11:59738075 1.42E-71 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1707 None None None None Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi08g01320 K25871 - csv:101210748 714.531