Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi08g01398 TGATATTTGATGCTAATCTCGATAACTGAGAGAAGAGAGGAACCTGATGCTGGAAGAGCAGCGAGAGAAGCATCAATAGAACGAACGATTCCAACTTCTCTGCAAAATTTCAGAGAGTTTTTCGTAGTTCTTTTGTTGCCTTCTTCTTGCTTTCCCCTCTCTTTTTCAATGGGTAATTGCCTCGAAAAAACTCACTCTAAGGTCGATAACTCTCTCAACTCCCTTCCTAATTCAGAAGAACCAAAAAATCATGATAGGAAAGGTCATTCATCTGCTTCTTTGAGAGCTCCATCACTTGGTGGGAATACGCCATCTAGAGGTCTTCAAGTTCATAGATCTGAAGTCTAATTGGAGAAGGAGGTTTTGGTCATGTTTACAAAGGATGGATTGATGAACATACACTTGAAGCTGTGAGGCCTGGAGCTGGAATGGTTGTTGCGGTGAAGAAGCTTAAACCTGAAGGTTTTCAAGGACACAAGGAATGGCTGTCTGAAGTAAATTACCTTGGTCAGCTTCATCATCCTAATCTGGTTAAACTAATTGGATTCTGCCTTGATGGGGATAGCCGACTTTTGGTCTATGAGTATATGTCCAAAGGCAGCCTTGAAAATCATCTATTTAGAAGGGGTGCTCGACCACTTTCTTGGGCAATAAGGATCAAAGTTGCTATAGGTGCTGCTCGAGGGCTTACCTTTCTGCATGACTCTGAAGAACCAGTTATCTATCGGGATTTTAAGGCATCAAACATCCTTCTAGATTCTGAATTCAATGCAAAACTTTCAGATTTTGGTTTGGCAAAAGCAGGCCCAACTGGTGATCGAACTCATGTGTCCACTCAAGTTATGGGTACTCAAGGCTATGCTGCTCCAGAATATATTGCCACTGGTAGGTTAACAGCTAAGTGTGATGTTTATAGCTTTGGGGTTGTGCTGCTGGAGCTCCTCTCAGGACGCCGTGCTGTTGATAAAACTAAAGTCGGCGTCGAACAGAATCTTGTGGAATGGGCAAGACCTTACTTGGCTGATAAGCGCAAGTTATTTCGGATAATGGACATTAAGTTAGAGGGTCAATACCCTCAAAAAGCTGCTTACATGACTACAGTCCTTGCATTGCAGTGCATTCGAGAGGCAAAATTCCGACCACAGATGTCTGAGGTTTTATATGCTCTTGAACAGCTCCCTCTGGTTAAGCATGTCCATAACCAAAGAGCAAACAGTCCAGGGCCGAAGTCCCCGCTAAGACATAAGTACCCTTCACCTGTAAATTCGACTACACCAAAAGCAAGCTCTCCATTACCATCCAAATGATAACCATAGGGACCTTTGAGAAGGGAGGGATCATCTTTTTAGCAATGACCCAAGTAAATATATATTTTTGACTTAGGCACGGTTGGTTGGTAGACTGTAGCGGTCAGAAAAATCTCATTCCCCCTTTCGTCTTTGACTATACATTGAACAAGGAAAAGAGTCCAATGTTTTGACTGAAGAGGATGATGATGATGATGATATATATATAGTCATCAGCCTGATCAATTGTTTCTAATCTGCCAATGAAGCTGAGTTTGAAATTGTTGGTTTTGATTCTTGTAAGCAACAACAGCACAACAGTCACAATTTGTTGGGTTTTTATAAAGATGAAGTGGCGCTGAGTTTGTTTGGGGGGAATCTTGGGCAGCTGCCATAATAAATTTTGTAGAGAGAATATTTCACCTTTACATAGAAGGGATGGAAATAATGAGTAGCATCAGTGATTAAAGAGAGTTGGTTTAGTTGGCATTTTACCATGAGGGATTGGTGTTCAGAATTTGAGATTTGATAATCAAACCTTAAAATATCATGGAAGGTTTCTATTGGCTCATAA 1860 41.24 MVVAVKKLKPEGFQGHKEWLSEVNYLGQLHHPNLVKLIGFCLDGDSRLLVYEYMSKGSLENHLFRRGARPLSWAIRIKVAIGAARGLTFLHDSEEPVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTQGYAAPEYIATGRLTAKCDVYSFGVVLLELLSGRRAVDKTKVGVEQNLVEWARPYLADKRKLFRIMDIKLEGQYPQKAAYMTTVLALQCIREAKFRPQMSEVLYALEQLPLVKHVHNQRANSPGPKSPLRHKYPSPVNSTTPKASSPLPSK 292
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 41654245 41658783 + XM_039039521.1 Bhi08g01398 41731

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi08g01398 292 PANTHER BNAC02G17010D PROTEIN 1 280 - -
Bhi08g01398 292 PANTHER OS01G0588500 PROTEIN-RELATED 1 280 - -
Bhi08g01398 292 SUPERFAMILY Protein kinase-like (PK-like) 2 269 IPR011009 -
Bhi08g01398 292 Gene3D Transferase(Phosphotransferase) domain 1 55 263 - -
Bhi08g01398 292 PIRSF ILK 1 261 - -
Bhi08g01398 292 ProSiteProfiles Protein kinase domain profile. 1 253 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi08g01398 292 Pfam Protein tyrosine and serine/threonine kinase 2 186 IPR001245 GO:0004672|GO:0006468
Bhi08g01398 292 MobiDBLite consensus disorder prediction 274 292 - -
Bhi08g01398 292 MobiDBLite consensus disorder prediction 257 292 - -
Bhi08g01398 292 Gene3D Phosphorylase Kinase; domain 1 1 54 - -
Bhi08g01398 292 ProSitePatterns Serine/Threonine protein kinases active-site signature. 97 109 IPR008271 GO:0004672|GO:0006468
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi08g01398 - - - bhj:120083681 588.571
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi08g01398 Bhi-Chr8:41654245 Bhi04g01248 Bhi-Chr4:31348065 2.81E-141 dispersed
Bhi08g01397 Bhi-Chr8:41654243 Bhi08g01398 Bhi-Chr8:41654245 0 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g526 Blo04g00764 . . . . . . . Cmo13g00966 Cmo18g00094 . . . . . . . . . . . . . . . . . . . . . Cone2ag0855 . . . Lsi02g00304 Csa01g00783 Chy12g01332 Cme12g01761 . . . . . Bpe15g00609 . . . . . Cma13g00936 Cma18g00122 Car13g00776 Car18g00112 Cpe09g01070 . Bhi08g01398 . . . . . . Cla01g01432 . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001456 1 3 2 0 2 0 4 0 0 2 1 0 4 3 0 4 0 0 4 0 3 0 0 0 0 3 0 0 0 1 37
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
87969 PF07714 PK_Tyr_Ser-Thr 4.50E-40 CL0016 Bhi PK