Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi08g01413 CTACTAGATGCTCCTTCACGATGGCACGTGAGATTCCCCCTCCCCCTTTCCCCAAAAAAAGCAACCCACAAAAGTTCATTCCAAACGAAAACAACAAGCTCTCCCCTTTCCCCCAAAATCACTTCCATTACTCTACTCATCACTGACTCATCATTTCTTTCTTTCTCCTCCTCTACCTACTTCTTCACAGATCTTCAATGGAGATCCCAATATTCAGCAGGAGCTTTACAATGGATGAAAAAGAGGGTCTTCACGGTACCAATTTCTCGCTGCAATCGCTTAGTTACTGTGAACTATGGCCAAGGGCCTGTTTTTGCCCTTGTGGAAGAAGCTTCTCAATCCCAATGTCTTATTCTGCACTTTCTGAATGGGTGGACTTTGTTGCTAGAGAATCTGATCCCCTCATCTCATAAAAAGTAATTTTCTTTTCTCACCGATGCTTCTTCTTCTGTCCTTTGGCATATTTTTTTTTTCCCTCTCCGTGACATCATTTCAAATTTTCAATGCTTAAATATATGATAATGGGTGTGAAAAAGGATGTGTTTCTCTTCAACTTTCTCCATTCTCTGACTAATATCACCCCTCCAGACAGTTGCTTACCTTTGGGGCTCTAATCCATATCTATAGTGTTTATGTCTATCCCACTGAAAAAGAAACTTGGATTCCATATAGTTTGGACAAACTCTAAAATGGGTTGTGATCAAGTACATCAAACCGTGTGGTTAAAGTGTTGATATAATGAAATGAGGTTTTTGTATGGATGATCCATTTCTAGAGGCATTATTGTAGAATAATCCAAATCCTAAAAAACGAATGAAAGCTAACCTTCGGTTGACATTACAGAGCACTATCGCGTTAGAGGGACATCTCTCCCATTGCAAAATAATCGAAGCCGTAACACAAAATTCATTTCAATCAAGATTTTTTTAAGTCAATGGCTATATATATATATTCAACAGTTGACCAACGGATGATTAAAAATGAAAAGAGCATGAGAGCTCCGACCATTTCACAATGGATAAGACGTCCCTTATACGATATTGCATTCCAAGCGGTGGAGTGATGTACGTAGAAGGTTAGTTTTCATTAGTTTTTGAGGATTGGATCATTCCGCATGAATGCCGTTGGGATCGGGTCATCCGTACAAAAATCTCGTAAATTACCGTTACCCTGTTTTAGTTTTGATTGTTTATTAGAGAGGGAAGTTTTGGGTTCAAATTATGAATTCCCGTAATGTCATTTATCGTCCGAATTAGTATTGATTTTTCACTTGTTGGGCTTTCTATAAATTTTCAAGTCCATAAATGAGGAAGAGAGTTGAAAGGTTGATATAATAAGTTTAGAGTTGATAAAGTGATTTAACATAAATATGTATTTGTCTTCAATAATATGATCCATTTCTTTCTCTTGTTCTGCATCACCCTGAGGAGAAATTTCTGGTGATGTTTGTTTTGACTATGTTTTATGTTATGTTCTTCAAGAAGATAAGGTTAATTCACCCATCATTTTGAGACTGCTTTCATTGGACAGATAGACTTATTTGAATAAGATTTTCACTTGTTTCACGCAAAGAATTTTTGTCTTTCTTTATTAAATTAATTAAGATTCTTTTTTATTAGATTATGAAAAGTAAACCCATTCATTTTCCCTTAATCCTAAATAGAAACCCCATCAAGAAATTTTCATTTGTGATCACATTTTACTTGTATGACGTTCTCATATTCTGGTTTGGTTTATACTTTAGTACCTTTTATCATAATTCATTCTAAATTTTCTTTTTAGAATAAAAAAAAATTCCCCCTTTTGAAGGAAAAAGGTAGATTTATGCCATTATCTGAAAAATAACCCTGCAAATTCATATTGATTTTATTTCCAGTGTTTGAGACAAGCTGAGAAGGCTATCTCTGCTTTATTTTATTCCTTTGCTTTTTTACTTGTATCCAATTGCTGTTTAATAGCCTTTAAACAAAATTCTGTCCAACAGAAAAACTATGCTCTTTCTTGGCTCCAGAAAGAATAATGTAGGGGACAATTAATTTTCCGGTGATATCTTCAAAATATGGAATTTGGAAGTCTAGGCTACTGTTGGACCATAAGTAGTCTTCTCTGAATTGAAATCTCTGTTAATCTTGTTTAGAATGAAGGATATACTTGTAAATACTTAAATTTGATTTTATTATCTTGGAAACATTGTTTACTTAATATAGTTTTCAATATTCTTGTTAGAAATACTGACCCTTAATTGCTTTTGGAGCTAGAAGATCCAAAATTTAGGAGAAAATGAAGGGAAAAAATGGAAAGAAGATATGGTATGCCATTATGCATCCAATTCCTTAGTTTTGGGAAATAAAATTCATTTCTTTTTGTGGAGCTGTCACTTAGCTTATTCGATTTGGTCGAGATTCTTGGATGTTTTCGAACTCTCTTTCGCGTGGAGTAGAATTGCTGGCTATGATTGAGGAAATTTTGTTGAGAACTTTCCCTTTGGGGGGAAGGTGAAAATCCTTTAGTAGGTTTATCTTTTGGTTGTTATATAGATTTAGTTTGAAAGGAATCATAGAATTTTTCGAGGGGTTGAACATGCTGTTTCTTTTTTAATTCCTGTAAATTCTTTTTCGGTTTCTTATGAAAAAGTAGTTATTTCTTAATTTAATTGTAATTTCAAAGAACCCAAGATCTTACAATTCACATATTTGGCAAGTAAATGGAAAGTCCCAAGACCACAATTCCTTGAAAGTGGATAAAGAAAGCAAATAAGAAGTTGACCGTTGAAGGGGATGGTTCCCCTTTAATTCCTCTCCATTTCTCATTTACTTATTTAATGAAGCTCTGAATTTATCATTGTTAGATAACCATTCCAAATTCAAATGGATTGTTGAGAATTAACACAAGTTTACAAAGAAAAGTACCTCAAAAAGATTAAAAACAGCAGAAATAGAAGATGAGAGAAACAGAAACCACCATTGTTGGGATTAAACTGCTAATGATATTTGGTTTTGTGATGATATTTCCAACCCTGAAGGCTAATATTGCAGATTTTGATGAGGTATGGCAGAAAAGAGCTGAAGAAGCCAAGAAGGCTTCCTTTGAGGCCTACCAACCCCATCCAGAAGAAGTCACTAGTAATTTCAACAAGCAAGTTCATAAATCCTTAGATGGTGCAAATAACACAAGGAGACATTTGAGGAAGTACAATGGTCCATGTTTAGCGACGAATCCGATTGACCGTTGCTGGAGATGCGATAAACACTGGGCTAAAAACCGCAAGAAGCTAGCTGATTGTGCACTTGGCTTTGGTCGTGGAACAACTGGAGGCAAAAATGGAAGGATTTACGTGGTTCGAGATTCAAGTGATAACGACTTGCTGAATCCTAAACCAGGAACCCTACGCTATGGCGTGATACAGGATAGACCACTTTGGATTATATTTGCACATGACATGGTGATTAGGCTAAGTGAGGAGCTTATAATGACTGATAACAAGACATTAGACGGTCGCGGTGCCAATGTGCACATCGCTAATGGTGGTCAACTTACTCTACAATTTGTGAAGAATATAATCATCCATAATCTTCACATTCATGATATCAAGGCTGGCAATGGAGGCATTATAAGAGACTCGGTGAACCACTATGGATTCCGAACACCGAGCGATGGCGACGGAATCTCGATGTTCGGAGCCTCAAAGGTTTGGATAGACCATGTTTCAATGTCTAATTGTCAAGATGGACTAATAGATGCAGTCATGGCATCTACTGGCATTACCATTTCCAACTGTCACTTCACCCGCCATAATGATGTGATTTTATTGGGTGCGAGTGATAGCTACTCAAATGATCAGATAATGCAGGTAACTCTTGCATTTAATCACTTTGGTAAAGGGTTGGTGCAAAGGATGCCGAGATGCCGATGGGGGTTCATCCATGTAGTCAATAATGACTACACTCACTGGCTTATGTATGCCATCGGCGGCAGCCACAACCCCACCATTATCAGCCAGGGAAACCGATTCATTGCCCCACCAAACCCAAATTCCAAAGAGGTGACGAAAAGGGCGTATGCATCGGAAAGTGAATGGAGATCTTGGAACTGGAGGTCAGAGGGAGATCTGATGTTGAATGGAGCTTTTTTCATCCAATCTGGTAACCCCATCAGAAGATACTCCAAGAAAGATGTTATCCATTCAAAACCCGGGACCTTTGTCACCAGGCTAACACGATTCGCTGGCCCTCTGAAATGCATAAAAAACCAGCCCTGTTAGTGAAATTGTTTACTTGGCCATGTCATGGTATGTCTATAAACTACTCAAAGTTCAACCGAACCCTGTAAGCACCAGAGGTTTATAGTAGTAAAGATTTAGATAGAAGATCTACAGAACTATGACAGCTTTTGCCGTTATGAAGTTTTGTGAATCACTTGTGTGATATAATGTATTGAAATAATATTGGTTATCCATCTTTTGAAAGTTGTCTCTTTTCCTTATCTATTTTCCTTCCATTATTTTGGTGAAGTTAATTCAGCAACATGCAATTGAAATATTATGTATATATATGGAACCAATGGTAAATGAAATAGATGGT 4580 36.72 MRETETTIVGIKLLMIFGFVMIFPTLKANIADFDEVWQKRAEEAKKASFEAYQPHPEEVTSNFNKQVHKSLDGANNTRRHLRKYNGPCLATNPIDRCWRCDKHWAKNRKKLADCALGFGRGTTGGKNGRIYVVRDSSDNDLLNPKPGTLRYGVIQDRPLWIIFAHDMVIRLSEELIMTDNKTLDGRGANVHIANGGQLTLQFVKNIIIHNLHIHDIKAGNGGIIRDSVNHYGFRTPSDGDGISMFGASKVWIDHVSMSNCQDGLIDAVMASTGITISNCHFTRHNDVILLGASDSYSNDQIMQVTLAFNHFGKGLVQRMPRCRWGFIHVVNNDYTHWLMYAIGGSHNPTIISQGNRFIAPPNPNSKEVTKRAYASESEWRSWNWRSEGDLMLNGAFFIQSGNPIRRYSKKDVIHSKPGTFVTRLTRFAGPLKCIKNQPC 439
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 41879424 41884594 - XM_039038682.1 Bhi08g01413 41746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi08g01413 439 PRINTS Pollen allergen Amb family signature 114 131 IPR018082 -
Bhi08g01413 439 PRINTS Pollen allergen Amb family signature 138 163 IPR018082 -
Bhi08g01413 439 PRINTS Pollen allergen Amb family signature 174 190 IPR018082 -
Bhi08g01413 439 PRINTS Pollen allergen Amb family signature 238 259 IPR018082 -
Bhi08g01413 439 PRINTS Pollen allergen Amb family signature 318 337 IPR018082 -
Bhi08g01413 439 PRINTS Pollen allergen Amb family signature 340 359 IPR018082 -
Bhi08g01413 439 PRINTS Pollen allergen Amb family signature 382 406 IPR018082 -
Bhi08g01413 439 Pfam Pectate lyase 177 357 IPR002022 -
Bhi08g01413 439 Gene3D - 91 432 IPR012334 -
Bhi08g01413 439 PANTHER PECTATE LYASE 12 439 - -
Bhi08g01413 439 Pfam Pectate lyase, N terminus 29 81 IPR007524 GO:0030570
Bhi08g01413 439 PANTHER PECTATE LYASE 18-RELATED 12 439 IPR045032 GO:0030570
Bhi08g01413 439 SMART amb_all 166 363 IPR002022 -
Bhi08g01413 439 SUPERFAMILY Pectin lyase-like 81 433 IPR011050 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi08g01413 Bhi-Chr8:41879424 Bhi11g03023 Bhi-Chr11:82254620 0 dispersed
Bhi08g01413 Bhi-Chr8:41879424 Bhi08g01414 Bhi-Chr8:41879427 0 tandem
Bhi07g01600 Bhi-Chr7:45519784 Bhi08g01413 Bhi-Chr8:41879424 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi08g01413 K01728 - csv:101218812 835.484