Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi08g01414 ACTAGATGCTCCTTCACGATGGCACGTGAGATTCCCCCTCCCCCTTTCCCCAAAAAAAGCAACCCACAAAAGTTCATTCCAAACGAAAACAACAAGCTCTCCCCTTTCCCCCAAAATCACTTCCATTACTCTACTCATCACTGACTCATCATTTCTTTCTTTCTCCTCCTCTACCTACTTCTTCACAGATCTTCAATGGAGATCCCAATATTCAGCAGGAGCTTTACAATGGATGAAAAAGAGGGTCTTCACGGTACCAATTTCTCGCTGCAATCGCTTAGTTACTGTGAACTATGGCCAAGGGCCTGTTTTTGCCCTTGTGGAAGAAGCTTCTCAATCCCAATGTCTTATTCTGCACTTTCTGAATGGGTGGACTTTGTTGCTAGAGAATCTGATCCCCTCATCTCATAAAAAATCCTTAGATGGTGCAAATAACACAAGGAGACATTTGAGGAAGTACAATGGTCCATGTTTAGCGACGAATCCGATTGACCGTTGCTGGAGATGCGATAAACACTGGGCTAAAAACCGCAAGAAGCTAGCTGATTGTGCACTTGGCTTTGGTCGTGGAACAACTGGAGGCAAAAATGGAAGGATTTACGTGGTTCGAGATTCAAGTGATAACGACTTGCTGAATCCTAAACCAGGAACCCTACGCTATGGCGTGATACAGGATAGACCACTTTGGATTATATTTGCACATGACATGGTGATTAGGCTAAGTGAGGAGCTTATAATGACTGATAACAAGACATTAGACGGTCGCGGTGCCAATGTGCACATCGCTAATGGTGGTCAACTTACTCTACAATTTGTGAAGAATATAATCATCCATAATCTTCACATTCATGATATCAAGGCTGGCAATGGAGGCATTATAAGAGACTCGGTGAACCACTATGGATTCCGAACACCGAGCGATGGCGACGGAATCTCGATGTTCGGAGCCTCAAAGGTTTGGATAGACCATGTTTCAATGTCTAATTGTCAAGATGGACTAATAGATGCAGTCATGGCATCTACTGGCATTACCATTTCCAACTGTCACTTCACCCGCCATAATGATGTGATTTTATTGGGTGCGAGTGATAGCTACTCAAATGATCAGATAATGCAGGTAACTCTTGCATTTAATCACTTTGGTAAAGGGTTGGTGCAAAGGATGCCGAGATGCCGATGGGGGTTCATCCATGTAGTCAATAATGACTACACTCACTGGCTTATGTATGCCATCGGCGGCAGCCACAACCCCACCATTATCAGCCAGGGAAACCGATTCATTGCCCCACCAAACCCAAATTCCAAAGAGGTGACGAAAAGGGCGTATGCATCGGAAAGTGAATGGAGATCTTGGAACTGGAGGTCAGAGGGAGATCTGATGTTGAATGGAGCTTTTTTCATCCAATCTGGTAACCCCATCAGAAGATACTCCAAGAAAGATGTTATCCATTCAAAACCCGGGACCTTTGTCACCAGGCTAACACGATTCGCTGGCCCTCTGAAATGCATAAAAAACCAGCCCTGTTAGTGAAATTGTTTACTTGGCCATGTCATGGTATGTCTATAAACTACTCAAAGTTCAACCGAACCCTGTAAGCACCAGAGGTTTATAGTAGTAAAGATTTAGATAGAAGATCTACAGAACTATGACAGCTTTTGCCGTTATGAAGTTTTGTGAATCACTTGTGTGATATAATGTATTGAAATAATATTGGTTATCCATCTTTTGAAAGTTGTCTCTTTTCCTTATCTATTTTCCTTCCATTATTTTGGTGAAGTTAATTCAGCAACATGCAATTGAAATATTATGTATATATATGGAACCAATGGTAAATGAAATAGAT 1844 42.25 MKKRVFTVPISRCNRLVTVNYGQGPVFALVEEASQSQCLILHFLNGWTLLLENLIPSSHKKSLDGANNTRRHLRKYNGPCLATNPIDRCWRCDKHWAKNRKKLADCALGFGRGTTGGKNGRIYVVRDSSDNDLLNPKPGTLRYGVIQDRPLWIIFAHDMVIRLSEELIMTDNKTLDGRGANVHIANGGQLTLQFVKNIIIHNLHIHDIKAGNGGIIRDSVNHYGFRTPSDGDGISMFGASKVWIDHVSMSNCQDGLIDAVMASTGITISNCHFTRHNDVILLGASDSYSNDQIMQVTLAFNHFGKGLVQRMPRCRWGFIHVVNNDYTHWLMYAIGGSHNPTIISQGNRFIAPPNPNSKEVTKRAYASESEWRSWNWRSEGDLMLNGAFFIQSGNPIRRYSKKDVIHSKPGTFVTRLTRFAGPLKCIKNQPC 431
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 41879427 41884592 - XM_039038681.1 Bhi08g01414 41747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi08g01414 431 SUPERFAMILY Pectin lyase-like 73 425 IPR011050 -
Bhi08g01414 431 PRINTS Pollen allergen Amb family signature 106 123 IPR018082 -
Bhi08g01414 431 PRINTS Pollen allergen Amb family signature 130 155 IPR018082 -
Bhi08g01414 431 PRINTS Pollen allergen Amb family signature 166 182 IPR018082 -
Bhi08g01414 431 PRINTS Pollen allergen Amb family signature 230 251 IPR018082 -
Bhi08g01414 431 PRINTS Pollen allergen Amb family signature 310 329 IPR018082 -
Bhi08g01414 431 PRINTS Pollen allergen Amb family signature 332 351 IPR018082 -
Bhi08g01414 431 PRINTS Pollen allergen Amb family signature 374 398 IPR018082 -
Bhi08g01414 431 SMART amb_all 158 355 IPR002022 -
Bhi08g01414 431 PANTHER PECTATE LYASE 18-RELATED 58 431 IPR045032 GO:0030570
Bhi08g01414 431 Pfam Pectate lyase 169 349 IPR002022 -
Bhi08g01414 431 PANTHER PECTATE LYASE 58 431 - -
Bhi08g01414 431 Gene3D - 83 424 IPR012334 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi07g01600 Bhi-Chr7:45519784 Bhi08g01414 Bhi-Chr8:41879427 0 dispersed
Bhi08g01414 Bhi-Chr8:41879427 Bhi11g03023 Bhi-Chr11:82254620 0 dispersed
Bhi08g01413 Bhi-Chr8:41879424 Bhi08g01414 Bhi-Chr8:41879427 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi08g01414 K01728 - csv:101218812 710.679