Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi08g01431 CATCAGATACCTCAACTCAATTCAATTCAACTATGCACTCAAACACAGACTTCCAAACTCAACTGTGCACACCAAACATAGATAATAATTACCAACTCAACAACTCAACTCTCTACTTTTATCATGCACCAGATGCTCTTTAACAGAGGTAACTATTAGAAACACACAAATCCTATTAAAGTAAATTAGATAAAGATACAAGAAACTGCTCCCAATCATAGGCTGCCACGTATCGCAGTCATTTTGTATTCATTTTTCTCGTCAATAATGCATATTTTGGTTAGGTAATGAGTCAACGATGACCTCACTAATTTGTTTCTAAAAGTACTTCCACTTAGTCTTCTTCCCCTTCACTCTGTCCAAAATTTCCAATTCCTCTGTTCACAGAACGTAATTTCCATGGATTCTATTTCCCGAAGGTCGAAGAGGAACGGAACCGAAAACTCCGACGGCCGCGACGGCAAGGTGGTCGTCAGAAGGAGGCCTCTGACGATGACGGAGCTTTTAACATCAACAAGCTCTACACTCGCGACGATCATGTTCGCCTGGTCAATCATCCGTCAATACTGTCCTCACGGTCTCCGCCAATATTTCCATTCATATTTAGGCAAGTTCTTCGATTACATCTATCCTAGTCCGTACATTCGAATCGCAATCTACGAATTCGCCGGCGATCGTCTCAGTCGAAACAAAGCCTTCGCGGCGGTTGAAGCTTATCTGAGCAATAAACTTTCGGATGACGCCAGAAGACTCAAAGCTGAGGTCGGGGAAAGCAAGAAAAACTTCACATTGAGTATGGATGAGTACGAAAGAGTTACCGATGAGTATGAAAACGCCGAGTTCTGGTGGACTTTGACCAAAATCGCCGGATCGACAAAGAAATCCACCTCCCTGTATCCAGAACCCGATCGGAGATATTACCAGCTTAAATTTCACAAGAAGCATCGAGAACTCGTAAAAGAATCGTATCTGAAGCACGTACTGAAGGAAGGGAAAGAAATCAGAATGAATCGGAGACGAAGGAAGCTTTACACTAATGGAACAGGAAATCGATGGCTACCTCACCGGCAATCGACGATGTGGAGCGAAGTTTATTTCGAGCATCCTGCAAATTTTGACACAATCGGCATGGATCCAGAGAAAAAGCAAGAGATTATAGAAGATTTACTTACATTTAGCCAAAGTAAGGAGTATTATGCTCGAATCGGCAAGGCGTGGAAACGAGGTTACCTTCTGTACGGCCCGCCGGGGACGGGGAAATCGACGATGATCGCCGCCATGGCTAATTTGTTGAACTATGACGTTTACGATTTGGAATTAACAGCAGTGAAGGACAATACAGAGCTTCGGAAGCTTTTAATTGAGACGACGAGTAAATCGATAATCGTGATTGAAGATATTGATTGTTCATTGGAACTCACAGGGCAAAGGAAAATCAAGAAAGAAGAAAGCTCGAAGGAAGAGGAGAAAGTAAAGGAGAAAGCAATTAAGGAACCGAAGAAAGAAGAAGAAGAGGTGAAAACCAGAGTAACTCTATCTGGATTGTTGAATTTCATCGACGGAATTTGGTCGGCGTGCGGCGGAGAGAGGCTGATTGTTTTCACAACAAATCATGTGGAGAAGCTTGATCCGGCATTGATTCGAAGAGGTAGAATGGACAAACACATAGAGCTTTCTTATTGTAGCTATGAAGCTTTCAAAGTGTTGGCTAAGAACTACTTGAATGTTGAGACGCATGAGCTTTTTAAGGAGATTAAAGAGCTTATTACAGATGCAAAAATGACGCCGGCGGACGTTGCAGAGAATCTAATGCCGAAATCACGGCAAGAAGAGGCGGATATTTCGCTTCGTAGGTTAATTGAGAGCTTGAAAGAGCTGAAGAGAGCAGCGGAGGAGAAGAAGAAAAGAAAGGAAGAGAAGTCAAAGGAGTCGTCGTCGTCGTCGTCGTCGTTGTCTTCGGAAAAGAAAGGATGATAAGGTAGTTGATATCTTTTGTCTAAAGAAGCTAGCACTATAAAGTAAAATTATTATATATAAATAAAAGTTAAATTAAAGTTTAGTTTATATCTTTTGGTTATGCTTCTATTTGGTTCTTCATCTTATTTTCAAATGTAGACATTTTCCAAGTTTCTAAATCTATTAGATACAAATTTGGAATTGAATTATAGTTTA 2172 41.11 MDSISRRSKRNGTENSDGRDGKVVVRRRPLTMTELLTSTSSTLATIMFAWSIIRQYCPHGLRQYFHSYLGKFFDYIYPSPYIRIAIYEFAGDRLSRNKAFAAVEAYLSNKLSDDARRLKAEVGESKKNFTLSMDEYERVTDEYENAEFWWTLTKIAGSTKKSTSLYPEPDRRYYQLKFHKKHRELVKESYLKHVLKEGKEIRMNRRRRKLYTNGTGNRWLPHRQSTMWSEVYFEHPANFDTIGMDPEKKQEIIEDLLTFSQSKEYYARIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYDVYDLELTAVKDNTELRKLLIETTSKSIIVIEDIDCSLELTGQRKIKKEESSKEEEKVKEKAIKEPKKEEEEVKTRVTLSGLLNFIDGIWSACGGERLIVFTTNHVEKLDPALIRRGRMDKHIELSYCSYEAFKVLAKNYLNVETHELFKEIKELITDAKMTPADVAENLMPKSRQEEADISLRRLIESLKELKRAAEEKKKRKEEKSKESSSSSSSLSSEKKG 524
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 42191725 42193896 - XM_039039716.1 Bhi08g01431 41764

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi08g01431 524 Gene3D - 424 492 - -
Bhi08g01431 524 Pfam ATPase family associated with various cellular activities (AAA) 278 426 IPR003959 GO:0005524|GO:0016887
Bhi08g01431 524 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 132 493 IPR027417 -
Bhi08g01431 524 PANTHER BCS1 AAA-TYPE ATPASE 33 516 - -
Bhi08g01431 524 Coils Coil 476 510 - -
Bhi08g01431 524 MobiDBLite consensus disorder prediction 497 511 - -
Bhi08g01431 524 CDD AAA 261 427 - -
Bhi08g01431 524 Gene3D - 229 423 IPR027417 -
Bhi08g01431 524 ProSitePatterns AAA-protein family signature. 397 416 IPR003960 GO:0005524|GO:0016887
Bhi08g01431 524 Pfam Domain associated at C-terminal with AAA 58 153 IPR025753 -
Bhi08g01431 524 SMART AAA_5 273 429 IPR003593 -
Bhi08g01431 524 MobiDBLite consensus disorder prediction 497 524 - -
Bhi08g01431 524 MobiDBLite consensus disorder prediction 1 22 - -
Bhi08g01431 524 PANTHER ATP BINDING PROTEIN 33 516 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi08g01431 - - - cmo:103483085 800.045
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi08g01431 Bhi-Chr8:42191725 Bhi11g03034 Bhi-Chr11:82717397 0 dispersed
Bhi08g01431 Bhi-Chr8:42191725 Bhi08g01433 Bhi-Chr8:42260227 0 proximal
Bhi06g00451 Bhi-Chr6:10136637 Bhi08g01431 Bhi-Chr8:42191725 2.73E-172 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g477 . . . . . . . . Cmo13g00944 . . . . . . Cpe20g00212 . . . . . . . . . . . . . . . . . . . Lsi02g00331 Csa01g00805 Chy12g01312 Cme12g01737 . . . . . . . . Sed08g2559 . . Cma13g00919 Cma18g00135 Car13g00758 Car18g00127 Cpe09g01057 . Bhi08g01431 Tan05g2065 Cmetu12g1057 Lac10g0394 Hepe07g2269 . . Cla01g01413 Cam01g1479 Cec01g1518 Cco01g1564 Clacu01g1502 Cmu01g1395 Cre01g1315 . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0013815 0 1 0 0 0 1 1 1 1 1 1 1 1 1 1 0 1 0 1 1 1 1 1 1 1 2 1 2 1 0 25