Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi08g01452 AACCCATCCCCCGCCTAAAGTCTAAAATCTCTACTCTCTCTCTCCCCCCCCTTAATCTCAACGGTCCTCATTCACTCTCTCTCTCATCTCTCTTTTCTCTCTCATTACCTCAATTTTCTCTTCCCTCCAATTCCCAACCCCACTTCCCGATAATTTTCTTCACTCCTTTGTAGATCTGCGGCGGCGGCGGCGGCGGTGGTGACGGCGACGACTTCATGGCGGCTCTGCCATCTTCTTCTGCTTTACCGGATTCTTCTTCCTCCAGACACCATACTTACAGTAGAAAGCAGAAATCCCTTGGTCTTTTATGCTCAAATTTTTTGAGCTTGTATAACCACGATGGAGTTCATTCGATCGGGCTTGACGATGCCGCATCGCGATTAGGTGTGGAAAGGCGGCGGATCTATGATATCGTGAATGTTTTGGAGAGCGTTGGGGTTCTGTCGAGAAAGGCGAAGAATCAGTACAGCTGGAATGGGTTTGGAGCAATCCCTAAGGCCTTACAAGATCTTAAAGAAGAGGGCTTAAAGGAGAATTGCAGTGCATCTGATGGTAACGATTATGCGAAAGTCTCGGATGACGAAGATGAGGATGAAAGATTTTCCAATCCAACTGGAAGCCAGACCTCAACTGCAGCCGTGCCAAAATCATCTTCATCATCGTTAAAAGCTGACAATAGAAGGGAAAAGTCATTGGCGCTCCTGACGCAAAATTTTGTTAAGCTATTTATCTGCAGTCATGTTAATATGATTTCCCTTGATGAAGCTGCTAAGCTCTTATTAGGAGATGGCCACAATTCATCGATAATGAGAACTAAAGTAAGGAGGCTATATGACATTGCGAATGTGCTGTCTTCTATGAATCTGATTGAAAAGACCCATACAACGGACACAAGAAAGCCGGCGTTTAGGTGGTTGGGAGTGAGGGGTAAAGTCAAGAATGAGCCCACCGTTCTTCCAGAGTCCAGAAAAAGGGCATTTGGAACTGATGTAACAAATGTCAGTTATAAGAAGACTAAGGCTGAAAGTTCAGCCTATCAGGGTTTAAATCATTGCCTCAACATGCAAAAGCTAGTGCAGTGCGAGAATTCTTCGCAAGAGGATAGCCAGAATAGTCAGGATCAGGAATGTGAACGAACTTCCAAGAGCTATCAATTTGGACCATTTGCTCCAGTAACGGTAGCTAAAGTTGGTGTCTCAGACAATAACAATGCGAAGCGGACTCATGACTGGGAAAGCCTTTCCTCAACATTCCGTCCTCAGTATCACAATCAAGCCTTAAAAGAACTTTTCTCCCATTACGTGGAAGCTTGGAAATCATGGTATTCTGAAGCAGTGAAGAAACCTATACAAATATCTTGATGTGCTTTGTTACGTGCTCGAAATATTTAATAAGCTTATCTCAATTAAGCGTTGTTTCTACTGCAATTAGTCAAAGGAAAAAAAAAAAAAAGCTTGGCCTTTTCTTGGTTGCATTTCCTTAATGCACCAACTTAGTACGGGGTCATCTTTGAAAGTGCAAAACATTTTCAATAGGTTCTTGTTTGTATTATCCCGAAAACAAGCCTAACATAGTTGTTAGTTATTTTTTTTTTTCTCTTCTCTTCA 1607 42.75 MAALPSSSALPDSSSSRHHTYSRKQKSLGLLCSNFLSLYNHDGVHSIGLDDAASRLGVERRRIYDIVNVLESVGVLSRKAKNQYSWNGFGAIPKALQDLKEEGLKENCSASDGNDYAKVSDDEDEDERFSNPTGSQTSTAAVPKSSSSSLKADNRREKSLALLTQNFVKLFICSHVNMISLDEAAKLLLGDGHNSSIMRTKVRRLYDIANVLSSMNLIEKTHTTDTRKPAFRWLGVRGKVKNEPTVLPESRKRAFGTDVTNVSYKKTKAESSAYQGLNHCLNMQKLVQCENSSQEDSQNSQDQECERTSKSYQFGPFAPVTVAKVGVSDNNNAKRTHDWESLSSTFRPQYHNQALKELFSHYVEAWKSWYSEAVKKPIQIS 381
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 42588844 42592042 + XM_039040117.1 Bhi08g01452 41785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi08g01452 381 PANTHER TRANSCRIPTION FACTOR E2F 7 373 IPR015633 GO:0000978|GO:0006357
Bhi08g01452 381 Gene3D - 150 237 IPR036388 -
Bhi08g01452 381 Gene3D - 18 91 IPR036388 -
Bhi08g01452 381 SMART E2F_TDP_2 23 88 IPR003316 GO:0005667|GO:0006355
Bhi08g01452 381 SMART E2F_TDP_2 155 235 IPR003316 GO:0005667|GO:0006355
Bhi08g01452 381 MobiDBLite consensus disorder prediction 131 149 - -
Bhi08g01452 381 MobiDBLite consensus disorder prediction 106 153 - -
Bhi08g01452 381 PANTHER E2F TRANSCRIPTION FACTOR-LIKE E2FF 7 373 - -
Bhi08g01452 381 Pfam E2F/DP family winged-helix DNA-binding domain 24 88 IPR003316 GO:0005667|GO:0006355
Bhi08g01452 381 Pfam E2F/DP family winged-helix DNA-binding domain 157 235 IPR003316 GO:0005667|GO:0006355
Bhi08g01452 381 SUPERFAMILY Winged helix DNA-binding domain 157 236 IPR036390 -
Bhi08g01452 381 SUPERFAMILY Winged helix DNA-binding domain 22 86 IPR036390 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi02g00387 Bhi-Chr2:7466026 Bhi08g01452 Bhi-Chr8:42588844 1.95E-124 dispersed
Bhi02g00388 Bhi-Chr2:7466028 Bhi08g01452 Bhi-Chr8:42588844 3.81E-131 dispersed
Bhi08g01450 Bhi-Chr8:42588828 Bhi08g01452 Bhi-Chr8:42588844 0 dispersed
Bhi08g01451 Bhi-Chr8:42588830 Bhi08g01452 Bhi-Chr8:42588844 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1721 PF02319 E2F_TDP 2.30E-20 CL0123 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi08g01452 K09391 - csv:101219210 712.99