Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi08g01472 TGAGGATCTTCATAATCGGTTCATGTGCGGTGCAGCAGATCAAGCCCATCTGTTGCTTTAAATATTGAACAAAGCCGAAACCCTAAAATCCCCTAGCCTCTGCAACTTTCTCTGTGAGTTTCTTGCTTTGCTACCGGCGAGAGAAATCACATCAGTTCGCAATGGCGGTCTCATTGAGCGATGTCAAGTCGGCAGCCGGTCTAAAAAAGCTCGACGAGTACCTGCTCACTTGTAGTTACATTTCTGGGTATCAAGCTTCAAAAGATGATATCGCTGTTTTCGAAGCTATCTCCAAACCCGTTTCCAGCGAGTATGTCAACGTATCTAGGTGGAGCAAGCATATCGAAGCACTCTTGAGAGCCTCTGCTGTTTTTGGAGAGGGTTCTGGCGTTAAGTTTGAGGCAGAAGCAATCGCAACCCCACCAGCTGCCGATGCTAAGCCTAGCGCCGACGACGACGACGACGATGATATGGATCTGTTTGGCGAAGAGACTGAAGAGGAAAAGAAGGCTGCTGAGGAGCGTGCAGCTGCCATCAAGGCTTCTGCGAAGAAGAAAGAGAGTGGAAAATCATCAGTTCTGATGGATATCAAGCCTTGGGATGATGAAACTGACATGAAGAAACTTGAAGAGGCTGTAAGAAGCGTTCAGATGGAAGGATTGCTTTGGGGAGCATCCAAACTTGTCCCTGTTGGATATGGTATTAAGAAACTGCAGATAATGCTCACAATTGTTGACGACCTTGTGTCTGTTGACAATCTCATTGAGGAACATTTGACCGTCGAACCCATAAATGAGCATGTCCAGAGTTGCGATATTGTTGCCTTCAACAAAATCTAG 839 46.48 MAVSLSDVKSAAGLKKLDEYLLTCSYISGYQASKDDIAVFEAISKPVSSEYVNVSRWSKHIEALLRASAVFGEGSGVKFEAEAIATPPAADAKPSADDDDDDDMDLFGEETEEEKKAAEERAAAIKASAKKKESGKSSVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEHLTVEPINEHVQSCDIVAFNKI 225
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 43078275 43080068 - XM_039037731.1 Bhi08g01472 41805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi08g01472 225 CDD EF1B 134 225 IPR014038 GO:0003746|GO:0006414
Bhi08g01472 225 PANTHER EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBER 1 225 - -
Bhi08g01472 225 SUPERFAMILY eEF-1beta-like 133 225 IPR036219 -
Bhi08g01472 225 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 1. 100 108 IPR001326 GO:0003746|GO:0005853|GO:0006414
Bhi08g01472 225 SMART EF1_GNE_2 136 225 IPR014038 GO:0003746|GO:0006414
Bhi08g01472 225 Gene3D - 2 74 - -
Bhi08g01472 225 MobiDBLite consensus disorder prediction 95 109 - -
Bhi08g01472 225 Coils Coil 108 128 - -
Bhi08g01472 225 Gene3D - 129 225 IPR014717 -
Bhi08g01472 225 MobiDBLite consensus disorder prediction 87 119 - -
Bhi08g01472 225 Pfam EF-1 guanine nucleotide exchange domain 138 225 IPR014038 GO:0003746|GO:0006414
Bhi08g01472 225 SUPERFAMILY GST C-terminal domain-like 10 66 IPR036282 -
Bhi08g01472 225 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 2. 214 225 IPR001326 GO:0003746|GO:0005853|GO:0006414
Bhi08g01472 225 PANTHER ELONGATION FACTOR 1-DELTA 1-RELATED 1 225 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi08g01471 Bhi-Chr8:43077751 Bhi08g01472 Bhi-Chr8:43078275 1.34E-163 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi08g01472 K03232 - csv:101215489 327.791