Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi08g01473 TTGGGCATTAAACAGATAGGAAATCGAAGGGGAAGAAAAAAAGAAAAAAAAGAAAAAGGGGAAGGAAAAAAAAAAAGAAGAAGAAGAAGAAGGGAACCCAGGGGAGAGAGTCATGGTTTCAACGAGAAGAAGTGGATCTCTCTCTGGTAGCAATAGCAAAAGATCTTCGTCTTCGGAGGATAAGCCATCGTCACCGAAGCGTCAAAAGGTGGAAAATGGGTGTGGTTCAGAGAAATCGATGCCGGCGGCGGAGAATTCTAAGGAATTATGCACCGCGCCGACTGTGGATCCTGGAGAGCATGGACCTGGCGGTGGTCCGATCGCTGGAGTTGACGTGGGAGAAGGTGTGAGCTCTTTGAAGGAGGATGCTGCACCACCGGCCGTCGCTGTTAACACTCCTATCGCCGAGGGAACTTCGCTGGTGGGAGATAAGCCTAGGAGTTCATTTTCATCATGGAGTCACTATGCTGCGAAGCAGAATCCAAATTTTGAAACGACAACTCCTTGGTGTAGGCTTCTCTCACAGTTCGGACAGAACTCCAATGTTGATATTTTCTCGTCAAATTTTACCATTGGTTCTAGTAGAGGTTGCAACTTTCCCTTGAAGGATCACACAATTAGCGGAACACTTTGCAAGATCAAGCACACTCAGCGTGAGGGTAGTGCTGTAGCTGTGCTGGAAAGTACGGGAGGCAAGGGATCGGTGATGGTCAATGGGTTGACTGTCAAAAAGAGCACCAACTGTGTGCTAAATTCTGGTGACGAGGTGGTCTTCGGTGCTCTGGGGAACCATGCTTATATATTTCAGCAACTTATGAATGAGGTTTCAGTTAAAGGTTTGGATGTTCAGAGCGGTGTTGGAAAATTCTTGCAGCTCGGAAAGAGGACTGGCGATCCTTCTGCTGTGGCCGGGGCCTCGATCTTGGCGTCTCTTTCAAACCTCAGACAGGATATATCACGTTGGAAGCCTCCTTCTCAGACCAGCAGTAAAACACACCAAGGTGCTGAACTTCCTTCTAAATCTATTGTTCATGATGCAATGGAACTTGAAATTGATGCTCTTGAAGCCAACTCAAATCCAGAAGTACGAAATGATAAAGCTGTAGACTCAAGCACAACTAACAGGAATCTTCATCCCGGCTCCAATCCAGACGCTGTCATAGAGGCAGGCAATGTAAAACTCTCTGGGGTGAATGATTTGATAGGGCCTTTGTTCAGGATGTTAGCTCAGTCAACTAGTTGTAAACTGAAATTGAGCAAAAGTATCTGTAAACAGGTAATGGAAGAAAGAAACCAGTGGATTGGGGAGTTGCAGCCAGCATCAACTTCGGGAATGTCTTTGCGGTGTGCAGCATTTAAAGAAGATGTTCACGCAGGGATTGTTGATGGAAGAGGCTTAGAAGTTTCATTTGACAACTTTCCATACTATTTGAGTGAGAATACGAAGAATGTGCTTATTGCTGCTTCTTTCATACACTTGAAGCATAAAGAACATTCAAAGTATACCTCAGAATTAAATACAGTGAATCCACGAATTCTACTTTCTGGTCCCGCTGGTTCAGAGATATATCAAGAGATGCTAGCAAAGGCACTTGCCAACTACTATGGTGCTAAGCTACTCATATTTGATAGCCATTCATTTTTGGGTGGTTTATCATCAAAGGAAGCAGAGCTGTTGAAGGATGGAATTAATGCAGCAAAGTCTTGTAGCTGTTCTAAACAGAGTATTGTATCTACTGAGACCACCAAGAACACAGATCAAGTGACTGGTGAAGAAGATACACCAAGCTCTTCTACTTTATTCACCCCTGATTCCCAACCTAAGATGGAGATGGACTCAATACCATCATCCTCTGGGACAGCAAAGAATAGCTTTTTAAAAATTGGTGATAGAGTAAGATTTATAGGTTCAGCTTCTGGGGGGATATATCCTACAACATCTCCCTCAAGGGGCCCACCCAATGGAACACGTGGAAAGGTTGTATTAACTTTTGACAACAACTCTTCGTCAAAAATTGGTGTTAAGTTTGATAAACTTATACCTGATGGAGTTGATCTTGGGGGATATTGTGAAGGAGGCTATGGATATTTCTGTAATGCTACCGATCTTCGTTTGGAGAACTCTGGTGTGGAAGAATTGGATAAGATACTTATTGATATTTTATTTGAGGCGGTATATAGTGAAAGCAGAAATTCTCCTTTCATTTTGTTCATGAAAGATGCTGAGAAGTCTCTTGTTGGAAATTTAGACTCCTATTCTACTTTTAAAAGTAGACTGGAAAAGCTTCCCGACAATGTTATAGTAATTGGTTCTCATACTCATACTGACAACCGCAAGGAGAAGTCACATCCTGGTGGCCTACTTTTCACGAAATTTGGCAGCAATCAAACTGCTCTTCTTGACTTGGCATTTCCGGATAGTTTTGGAAGACTACATGATAGAGGGAAGGAAGTTCCAAAAGCAACAAAACTTCTTACTAAACTATTTCCCAATAAAGTTACAATCCACATGCCGCAGGATGAGGGCCTTCTTGTATCATGGAAGCACCAGTTAGAACGAGATGCCGAAACTCTTAAAATGAAGGGAAATCTTAATCAATTGCGCGTTCAGGTTTTGAGTAGGAGTGGAATGGATTGTGAAGGTTTAGAGACATTATGCATCAAGGATCAAACGCTTACTAACGAGAGTGCGGAGAAGGTAGTTGGATGGGCCTTAAGCCATCATTTAATGCAGAATCTGGATGCCGATCCTGATTCTAGAGTTCTTTTGTCTAGTGAGAGCATTCAATACGGGATCAGCATCTTACAGGCTATCCAGAATGAATCTAAGTGCTTGAAGAAGTCACTTAAGGATGTTGTTACAGAGAATGAATTCGAGAAAAGGCTTTTAGCAGACGTTATCCCACCAAGTGATATAGGAGTCACATTTGATGATATCGGAGCTCTAGAAAATGTGAAGGATACTTTAAAGGAGTTGGTGATGCTTCCTTTGCAAAGGCCCGAACTTTTCTGCAAGGGGCAATTGACTAAGCCATGCAAGGGCATTCTATTATTTGGCCCACCTGGAACAGGTAAGACGATGCTCGCAAAAGCTGTTGCTACTGAAGCTGGTGCAAATTTTATCAACATTTCCATGTCAAGCATTACGTCGAAGTGGTTCGGTGAGGGTGAGAAGTATGTAAAAGCTGTTTTCTCTCTAGCCAGTAAAATTGCCCCAAGTGTTGTATTTGTCGATGAAGTTGACAGCATGTTGGGTCGAAGAGAAAATCCGGGAGAACATGAGGCCATGAGAAAGATGAAAAATGAATTTATGGTGAACTGGGATGGTTTGCGAACAAAGGACACAGAAAGGGTGCTGGTTCTTGCAGCCACAAACAGACCTTTTGACCTTGATGAAGCTGTTATTCGAAGGCTTCCTCGTAGGTTGATGGTGAATTTGCCAGATGCTCCAAACAGAGCAAAGATACTTAAAGTTATTTTGGCAAAAGAAGATTTGTCTCCAGAATTTGATTTTGATTCGGTTGCTAGTATGACGGATGGCTATTCTGGGAGCGACCTTAAGAATCTTTGTGTTGCTGCTGCTCACCGTCCAATTAAAGAGATATTGGAGAAGGAAAAAAAGGAGCGTGCTGCAGCTCTCACAGATGGCAGGCCTGCTCCAGCCCTTAGTGGAAGTGAGGATATTCGGCCTCTAAACATGGATGACTTCAAATATGCTCATGAACGGGTATGTGCGAGTGTTTCGTCGGAGTCTGTAAACATGACGGAGCTGTTACAATGGAACGAGCTCTATGGTGAAGGAGGTTCTAGGAGAAAGAAGGCTCTTAGTTACTTCATGTAAGCTGATATTTGTACAAATCTTCGAGTGTCTCATTAATTTCCATGCTTCTGCAGACGCCAGTGCTCACTCAAATCTAATTTATCATGGGGTCTTTCTGGAAGCCAATTTCTCTAGTATGAAAGTATAGGTTTTTGTAACTTTTTTTTCCCCTTCTTCCTTTTTGAAAGTTAGTTCAGAATGATGATTGGTATAGGAATGGAGCTGATCATAGTTTTGGTCATCCGCGACTTGTGTTTTGTGCCATCAGTAAAAAAATGTATCCTAAATTTGGAACTTTATTTACTTGGAAGCAGAGGAAAAGAATCACCATGTTCTTACATTTTCCCTCTCATTCTTTGCTGGGTTGAACAATAACCTTTGGTAGCATATTGTACCTGCAGATGGAGATAAAAATATCTTTTGAGCAAAACAAGTAACTTCTCATTCATCTA 4272 42.37 MVSTRRSGSLSGSNSKRSSSSEDKPSSPKRQKVENGCGSEKSMPAAENSKELCTAPTVDPGEHGPGGGPIAGVDVGEGVSSLKEDAAPPAVAVNTPIAEGTSLVGDKPRSSFSSWSHYAAKQNPNFETTTPWCRLLSQFGQNSNVDIFSSNFTIGSSRGCNFPLKDHTISGTLCKIKHTQREGSAVAVLESTGGKGSVMVNGLTVKKSTNCVLNSGDEVVFGALGNHAYIFQQLMNEVSVKGLDVQSGVGKFLQLGKRTGDPSAVAGASILASLSNLRQDISRWKPPSQTSSKTHQGAELPSKSIVHDAMELEIDALEANSNPEVRNDKAVDSSTTNRNLHPGSNPDAVIEAGNVKLSGVNDLIGPLFRMLAQSTSCKLKLSKSICKQVMEERNQWIGELQPASTSGMSLRCAAFKEDVHAGIVDGRGLEVSFDNFPYYLSENTKNVLIAASFIHLKHKEHSKYTSELNTVNPRILLSGPAGSEIYQEMLAKALANYYGAKLLIFDSHSFLGGLSSKEAELLKDGINAAKSCSCSKQSIVSTETTKNTDQVTGEEDTPSSSTLFTPDSQPKMEMDSIPSSSGTAKNSFLKIGDRVRFIGSASGGIYPTTSPSRGPPNGTRGKVVLTFDNNSSSKIGVKFDKLIPDGVDLGGYCEGGYGYFCNATDLRLENSGVEELDKILIDILFEAVYSESRNSPFILFMKDAEKSLVGNLDSYSTFKSRLEKLPDNVIVIGSHTHTDNRKEKSHPGGLLFTKFGSNQTALLDLAFPDSFGRLHDRGKEVPKATKLLTKLFPNKVTIHMPQDEGLLVSWKHQLERDAETLKMKGNLNQLRVQVLSRSGMDCEGLETLCIKDQTLTNESAEKVVGWALSHHLMQNLDADPDSRVLLSSESIQYGISILQAIQNESKCLKKSLKDVVTENEFEKRLLADVIPPSDIGVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDTERVLVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNRAKILKVILAKEDLSPEFDFDSVASMTDGYSGSDLKNLCVAAAHRPIKEILEKEKKERAAALTDGRPAPALSGSEDIRPLNMDDFKYAHERVCASVSSESVNMTELLQWNELYGEGGSRRKKALSYFM 1242
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 43081125 43094228 - XM_039038092.1 Bhi08g01473 41806

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi08g01473 1242 MobiDBLite consensus disorder prediction 282 301 - -
Bhi08g01473 1242 MobiDBLite consensus disorder prediction 543 584 - -
Bhi08g01473 1242 SUPERFAMILY SMAD/FHA domain 131 229 IPR008984 GO:0005515
Bhi08g01473 1242 Pfam FHA domain 153 222 IPR000253 GO:0005515
Bhi08g01473 1242 Gene3D - 1110 1204 - -
Bhi08g01473 1242 PANTHER ATPASE FAMILY AAA DOMAIN-CONTAINING PROTEIN 1-A ISOFORM 1 81 362 - -
Bhi08g01473 1242 PANTHER ATPASE FAMILY AAA DOMAIN-CONTAINING PROTEIN 1-A ISOFORM 1 387 1242 - -
Bhi08g01473 1242 SMART AAA_5 974 1111 IPR003593 -
Bhi08g01473 1242 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 937 1217 IPR027417 -
Bhi08g01473 1242 ProSitePatterns AAA-protein family signature. 1081 1100 IPR003960 GO:0005524|GO:0016887
Bhi08g01473 1242 CDD FHA 149 232 IPR000253 GO:0005515
Bhi08g01473 1242 Gene3D - 131 240 - -
Bhi08g01473 1242 CDD AAA 976 1109 - -
Bhi08g01473 1242 Pfam ATPase family associated with various cellular activities (AAA) 978 1107 IPR003959 GO:0005524|GO:0016887
Bhi08g01473 1242 MobiDBLite consensus disorder prediction 1 21 - -
Bhi08g01473 1242 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 81 362 - -
Bhi08g01473 1242 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 387 1242 - -
Bhi08g01473 1242 MobiDBLite consensus disorder prediction 326 343 - -
Bhi08g01473 1242 Gene3D - 936 1217 IPR027417 -
Bhi08g01473 1242 MobiDBLite consensus disorder prediction 282 299 - -
Bhi08g01473 1242 MobiDBLite consensus disorder prediction 22 36 - -
Bhi08g01473 1242 MobiDBLite consensus disorder prediction 1 76 - -
Bhi08g01473 1242 Pfam AAA+ lid domain 1132 1166 IPR041569 -
Bhi08g01473 1242 MobiDBLite consensus disorder prediction 317 346 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi08g01473 - - - csv:101214766 2313.49
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi08g01473 Bhi-Chr8:43081125 Bhi08g01475 Bhi-Chr8:43081556 0 dispersed
Bhi08g01473 Bhi-Chr8:43081125 Bhi08g01474 Bhi-Chr8:43081556 0 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g126 . . Bda06g00733 . Bpe12g00487 . . . Cmo13g00832 . . . . . . Cpe20g00310 . . . . . . . . . . . . . . . Cone2ag0968 . . Cone19ag0203 Lsi02g00499 Csa01g00959 . . . Blo15g00077 . . Bpe07g00884 . . . . . . Cma13g00801 . Car13g00649 Car18g00225 . . Bhi08g01473 . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002923 2 8 3 1 2 1 2 1 1 1 1 1 2 1 1 2 1 4 2 1 1 1 2 1 1 1 1 4 2 1 53