Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi08g01486 TTGTTTAACAACTCGCATAAATTCTTGACCCTTCATCTTTCATTTCTCCTCCTTTTCTCTGAAACCCTTTTTTTTTTTTTTTTTTCCTGGTAACTTTCTTTCTTCTTCCTTATTTTGGGGGTTTTGATTATTGTTTTGGGAGTGCTTGATTAACGGAAGGTGTAAAGAATGGCGACGACGACCACCAGTATTGGCGGCGGAGGTGGCGGCGGCGGTGGGGAAGATAGAGTTATGGCTACCGCTCAGCAGATAGTAAATAGCCTCAATAATACCCCTAAGGAGGTTCGAGACGACATGCTTTTGATCTTCTCTAGTTTTGACAATCGTCTTTCTAACATCACCAGTTTGGTCAACAGTGGGGATTCAAAGAGGGAGGAGGATCGATTTGAAGCTGCTGAGAAGGTGATTCTTCGTTGGGATTCTGGTCATGGAGCTTCTAGGAACTCAATTCATTGGGAGGACTCGCCAGATGAGGCGGCTGAGTACTTAACGGCGGTCGATGATATTATTCAGTGGATCGACGACTTGTCAATTCGTTCGGATTCTGCTGAGATCGTCGACCGTGCTGAGAACGCGATCCAGATCGCTATGTCGAGGCTTGAGGATGAGTTTCGTCATATGTTGATTCGGAGCACTGTCCCTCTCGATGCTGAGCATCTCTACGGTTCAATTCGTAAGGTTTCCCTCTCTTTCGCTTCACACGACAGCGAAAATTCCGATGAATTTGAGTCCTTCGCTGATGTTGACCGTGGTTCGGGAATTTACCATGAGCGTGGCGTTAGTTTGGGCGATGATTTGCGGGTCGATTTGATCCATCCTGATGCTGTTGTTGATTTGAAAGAGATCGCCGACCGGATGATTCGGTCTGGATACGAAAAAGAGTGTGTGAATGTGTATACTGGTGTCCGACGCGATGCTTTAGATGAGTGTTTGGTGGTTCTTGGAGTTGAGAAGCTAAGTATTGAGGATGTTCAGAAAATTGACTGGAAAATCTTGGACGAGAAGATGAAGAAATGGATCCAAGCTGTTAAGGTCAGTGTTCGAGTACTTTTGACTGCCGAGAAGCGACTGTGTGACTATATCTTTAGTGGGTCTGATGACTCTGAGGAACTTTGCTTCAATGAGACTGCAAAAGGGTGCATCAGACAATTACTGAATTTTGCAGAAGCCATTGCTATAGGGGAAAGGTCAGTAGAGAAGCTATTTCGTATTCTAGATATGTATGAAGCTCTGGAATACGTCTTCCCTGACTTGCAGGCTATGGTAACCGATGAATTTGTGATTGAGGAGGCTCGAGGAGTACTTTCTAGGCTGGGAGAGGCCGCCAAAGGTACATTTGCTGAATTTGAGAATGCTGTTCGGAATGAGACTTCTAAGAAAACAATGTTAAATGCTGAGATTCACCCGCTCACTCGATATGTCATGAATTACTTAACATTGGTTGTGGTTTATAGTAAGACTCTAGATGCTCTTTTAGAAGGAGATGATGAGGATTTGCATCATCTAGGGGGTGATGGCGGTGACAATTTGGAGTTAGAAACTATGTCTCCTTTAGCTCGTCGTCTGTTTTCATTGATAGCAACACTGGAGACCAATTTAGAGAGAAAATCCAAACTCTATGGTGATGATTCAATACAATATATATTTCTCATGAACAATATACAATATATTGTGCAGAAAGTGAAAGATTCTGAGCTTGGAAAGCTCTTGGGTGACCGCTGGGTTCGTAAGCGCCGTGGTCAGGTTCGCATTTATGCAACAAACTATCTTAGGGCATCTTGGGGCAAGCTATTATCTTTCTTAAAGGAAGAAGGTACTGGTGGGAGCTCTAATAGTGCTCTGAAACTAGCTACTTTAAAGGAAAAATTCAAAAATTTCAATGCTGGCTTTGAGGAAATCTATAGAATTCAGACAGGCTGGAAGGTTCCAGATGCTCAACTACGGGAAGAGCTCCGAATTTCAGTGTCCGCAAAAGCGCTACCTGCATATCGTGCCTTCTTGGGAAGACATGGAAGTCAGTTAGAGAATACAAGACATGCTGGGAGGTATATAAAGTACACATCCGATGACTTGGAAGGCTATTTATTGGATCTGTTTGAAGGATCACCTTGTGTTATACATCACTTACGAAGAAAAAGTAGTTCATAGCGAGATACTGAACCGACTCTATTGACAGCTTTGGTTTTTGACAAGTTTGGATGGGGAAACAATCAAATTTTGAAGGTCTTGTTGGTGGCAATTTTATAGTCATTCATGGCATTTTGTTGCTTTAATCTTGCCATCTATTATACTCTAGTTGAGACTTGAGAGAAATATCTTATTCAGCAGCTTATCTAAATGGGGAGGGTTCATATCCTTCTTATGTTCATGGATGTTTTATCCAATGAACCGTCGACACGTATTGTCGAAAGAAACGATGTCTGTTCTTATGGTCTAAGAATGTAAATTAGCTTTCTATGAATGGTAGCTCTTGTTTTTCTCCATTCTGTAAGGGAATTCTGATGTCTTGTAATGATATGAATATCCTATA 2530 42.21 MATTTTSIGGGGGGGGGEDRVMATAQQIVNSLNNTPKEVRDDMLLIFSSFDNRLSNITSLVNSGDSKREEDRFEAAEKVILRWDSGHGASRNSIHWEDSPDEAAEYLTAVDDIIQWIDDLSIRSDSAEIVDRAENAIQIAMSRLEDEFRHMLIRSTVPLDAEHLYGSIRKVSLSFASHDSENSDEFESFADVDRGSGIYHERGVSLGDDLRVDLIHPDAVVDLKEIADRMIRSGYEKECVNVYTGVRRDALDECLVVLGVEKLSIEDVQKIDWKILDEKMKKWIQAVKVSVRVLLTAEKRLCDYIFSGSDDSEELCFNETAKGCIRQLLNFAEAIAIGERSVEKLFRILDMYEALEYVFPDLQAMVTDEFVIEEARGVLSRLGEAAKGTFAEFENAVRNETSKKTMLNAEIHPLTRYVMNYLTLVVVYSKTLDALLEGDDEDLHHLGGDGGDNLELETMSPLARRLFSLIATLETNLERKSKLYGDDSIQYIFLMNNIQYIVQKVKDSELGKLLGDRWVRKRRGQVRIYATNYLRASWGKLLSFLKEEGTGGSSNSALKLATLKEKFKNFNAGFEEIYRIQTGWKVPDAQLREELRISVSAKALPAYRAFLGRHGSQLENTRHAGRYIKYTSDDLEGYLLDLFEGSPCVIHHLRRKSSS 659
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 43188853 43192253 - XM_039038690.1 Bhi08g01486 41819

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bhi08g01486 659 Pfam Exo70 exocyst complex subunit 281 640 IPR046364 GO:0000145|GO:0005546|GO:0006887
Bhi08g01486 659 Gene3D Exocyst complex component Exo70 87 649 - -
Bhi08g01486 659 PANTHER EXOCYST COMPLEX PROTEIN EXO70 54 657 IPR004140 GO:0000145|GO:0006887
Bhi08g01486 659 MobiDBLite consensus disorder prediction 1 20 - -
Bhi08g01486 659 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 54 657 - -
Bhi08g01486 659 SUPERFAMILY Cullin repeat-like 73 644 IPR016159 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi08g01486 K07195 EXOC7, EXO70; exocyst complex component 7 - csv:101212753 1191.41
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g02900 Bhi-Chr1:71888657 Bhi08g01486 Bhi-Chr8:43188853 1.70E-157 dispersed
Bhi08g00441 Bhi-Chr8:15782752 Bhi08g01486 Bhi-Chr8:43188853 7.68E-128 dispersed
Bhi08g01084 Bhi-Chr8:35047112 Bhi08g01486 Bhi-Chr8:43188853 1.40E-123 dispersed
Bhi08g01486 Bhi-Chr8:43188853 Bhi12g01225 Bhi-Chr12:36323426 5.97E-104 dispersed
Bhi08g01486 Bhi-Chr8:43188853 Bhi10g00657 Bhi-Chr10:14435507 2.93E-99 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g116 . Blo16g00265 . . Bpe12g00483 Bpe13g00204 Bma06g00256 . Cmo13g00835 . Cma10g00065 Cma11g00035 Car10g00053 Car11g00032 . Cpe20g00308 Cpe04g01614 . . . . . . . . . . . . . . . . . Cone19ag0206 . . Chy12g01170 Cme12g01592 . . Bda11g01602 Bda14g01366 . Bpe15g00216 Bma03g01256 . Sed08g2438 Cmo10g00061 Cmo11g00037 Cma13g00803 Cma18g00319 Car13g00651 Car18g00228 Cpe09g00962 . Bhi08g01486 Tan05g2961 Cmetu04g0927 Lac10g0582 Hepe07g2107 . . Cla03g00352 Cam03g0370 Cec03g0358 Cco03g0373 Clacu03g0370 Cmu03g0976 Cre03g0668 . . . .
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Bhi07g00686 . 12 653 EXO70 exocyst subunit family AT5G03540 75.3 6.3e-280 960.7
Bhi03g01779 . 1 638 EXO70 exocyst subunit family AT5G03540 70.7 4.9e-264 907.9
Bhi03g01779 . 1 638 EXO70 exocyst subunit family AT5G52340 79.3 2.3e-295 1011.9
Bhi07g00686 . 14 653 EXO70 exocyst subunit family AT5G52340 74.1 7.4e-270 927.2
Bhi03g01779 . 145 631 EXO70 exocyst subunit family AT5G52350 63.5 2.2e-175 613.2
Bhi07g00686 . 149 653 EXO70 exocyst subunit family AT5G52350 58.7 1.5e-163 573.9
Bhi08g00441 . 1 623 EXO70 exocyst subunit family AT5G58430 67.2 1.3e-247 853.2
Bhi08g00441 . 1 622 EXO70 exocyst subunit family AT1G07000 52.4 2.1e-173 606.7
Bhi01g03318 . 60 673 EXO70 exocyst subunit family AT5G13150 52.8 8.4e-176 614.8
Bhi12g01225 . 105 716 EXO70 exocyst subunit family AT5G13990 54.5 3.4e-191 666.0
Bhi01g02900 . 9 609 EXO70 exocyst subunit family AT1G72470 65.0 1.6e-216 750.0
Bhi01g02900 . 9 607 EXO70 exocyst subunit family AT1G54090 62.2 2.5e-209 726.1
Bhi01g02900 . 9 608 EXO70 exocyst subunit family AT3G14090 63.9 5.0e-218 755.0
Bhi08g01486 . 18 657 EXO70 exocyst subunit family AT5G50380 62.2 9.3e-226 780.8
Bhi04g01091 . 13 682 EXO70 exocyst subunit family AT4G31540 73.9 2.5e-295 1011.9
Bhi07g00980 . 58 614 EXO70 exocyst subunit family AT3G55150 50.5 3.2e-148 523.1
Bhi07g00980 . 31 613 EXO70 exocyst subunit family AT2G39380 50.6 4.8e-152 535.8
Bhi11g02203 . 27 631 EXO70 exocyst subunit family AT3G09520 54.8 1.7e-178 623.6
Bhi10g00657 CCT 35 608 EXO70 exocyst subunit family AT5G59730 50.4 7.4e-153 538.5
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001393 4 1 3 4 4 2 4 2 2 2 2 2 4 2 2 3 2 2 4 2 2 2 2 2 2 2 2 4 2 1 74