Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi08g01535 TCAGGAAAAAGAAAAGACCAGTCAATTATACACTGAAATTTTGCATGGGAATGCGTTACCAAAGATTTCAGCATCTTTTATTTCTCTCTCCTCTTTTCAATTTCTTTTATTTTTATTTTTCTTAGTCTTTATATAAGCCTGACCCTCTGAGCATTTCTTGCACTCACTTTTTTCCAGACCTGAATCAATAGCTTCCATTGTTTAACTTTCGAGCCCCTCAAAGCAAAGGAAAAAAAAAAATCAGTAAAGAGAGAGGGAAAAAAATGGCAGCTTTTTCATATCAATACCAACCATTTCTTCTTGACTCAATCTTTTTGCCCAACAATCCTCTCAAGATGGGAGGCTTTTTTGATGACCAAAACTTCAACAACAATTGTTTCTCTCAATTTTACTCTCAAGACCAACAACAACCCATTTACCATTTTCCTGATCTCTCTAAACAAAGCCCTGAATCTTCCACTTTGGTCGACCGATCCGATAGCGCCGAACCGCCGGTCGGAAATCAGTTGAAACCGGCTGTTACTGTAACTGTAACTTCCCCTTGTAGTAAGAAAAGGAAGAGCCGGAATAATTCTTCCGCCACCTCCGCCCAGTCCAAGGGTACTACTGAGAGCACTGGGAAAAAGCAGAAAAATAAAGGGGAATTAGATGAAGGGAAAGAAAAAGATCAAAAGCCCAAAAATGGGAAAAAATTAGAGGAGAAAAAAATTTCAGAAGATGGTGGTGCAACCACTGGTTACATTCATGTCAGAGCTAGAAGGGGCCAAGCCACTGACAGCCACAGTCTTGCTGAGAGGGTGAGAAGAGAAAAGATTAGTGAAAGGATGAAGACATTGCAACGCCTTGTTCCCGGTTGCGACAAAGTTACAGGGAAGGCCCTTATGTTGGATGAAATTATCAATTATGTTCAGTCCCTACAAAATCAAGTTGAGTTTCTCTCCATGAAACTCGCTTCGTTGAACCCAATTTTCTTCGACTTCAGAATGGACTTGGACGGCCTCATGATCCAACCAGAGACGACGTCGTTGAGTAGTATAACGCCACAACTACCAGCGATGGCACAATGCAGCGTCGTGCCACCGCCGGCGATGATCGACACCACCCCTCCGACAACCCCATCTCCGGCAATCTCCGCCGGAAATAATTATCCCTTAATGGAGTCTTCAGCTAATTTGTTTCTATTTCAACAAGGGATAAGCGCAAATAACGCCTACTCCCAATCGTCTCAGGATAACGTTAAAGTTTCATCATGGGATGTCGAAGACCAGAAACGAAAGCTTCTTATTTCATCAGGAATTGGCGACAGCTTATGTTACTTCCATTAAAGAGAGCTCTACTAAGAATTTCAATTAAATTTTTCTCTCATCTCTCATCCATTTAAATTTAAAAAAAAAAAAAAAAAAAGATTCGAAGGCTTGGAAGTGGACAGAGAACCTGAATAAAGTGGAAGTAACAAAAAATGGATGGACGACGAACACAGAGGATCGGATGTTTTCAAAGACATTAAATAATGGCTGCTCAAGTTTCGAGAATCTTCAGTGATTTTTTTAGATTAAAATAAATAAATTTATTTATTTTTAATGTATTAGTCTTAGATGAAAAACAATATATATTGGGGAAAAAAAACTGATTGGTTAGCCTTTATCCATTTTCATTTTATGTATGTAATTTCCATTCATCTGTTAATATATGCAATTTTTTCCTCTA 1707 38.84 MAAFSYQYQPFLLDSIFLPNNPLKMGGFFDDQNFNNNCFSQFYSQDQQQPIYHFPDLSKQSPESSTLVDRSDSAEPPVGNQLKPAVTVTVTSPCSKKRKSRNNSSATSAQSKGTTESTGKKQKNKGELDEGKEKDQKPKNGKKLEEKKISEDGGATTGYIHVRARRGQATDSHSLAERVRREKISERMKTLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSMKLASLNPIFFDFRMDLDGLMIQPETTSLSSITPQLPAMAQCSVVPPPAMIDTTPPTTPSPAISAGNNYPLMESSANLFLFQQGISANNAYSQSSQDNVKVSSWDVEDQKRKLLISSGIGDSLCYFH 353
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 44068362 44070784 - XM_039037916.1 Bhi08g01535 41868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi08g01535 353 MobiDBLite consensus disorder prediction 54 71 - -
Bhi08g01535 353 PANTHER BASIC HELIX LOOP HELIX PROTEIN BHLH8 1 353 - -
Bhi08g01535 353 MobiDBLite consensus disorder prediction 84 117 - -
Bhi08g01535 353 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 1 353 IPR024097 GO:0006355
Bhi08g01535 353 CDD bHLH_AtBPE_like 158 243 - -
Bhi08g01535 353 Pfam Helix-loop-helix DNA-binding domain 172 219 IPR011598 GO:0046983
Bhi08g01535 353 MobiDBLite consensus disorder prediction 54 156 - -
Bhi08g01535 353 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 166 234 IPR036638 GO:0046983
Bhi08g01535 353 SMART finulus 174 224 IPR011598 GO:0046983
Bhi08g01535 353 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 168 218 IPR011598 GO:0046983
Bhi08g01535 353 Gene3D - 165 235 IPR036638 GO:0046983
Bhi08g01535 353 MobiDBLite consensus disorder prediction 118 152 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bhi02g00636 Bhi08g01535 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi02g00636 Bhi-Chr2:12346843 Bhi08g01535 Bhi-Chr8:44068362 1.52E-46 dispersed
Bhi08g01535 Bhi-Chr8:44068362 Bhi09g01292 Bhi-Chr9:31785094 1.79E-45 dispersed
Bhi08g01535 Bhi-Chr8:44068362 Bhi09g03191 Bhi-Chr9:81814217 2.25E-42 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1727 PF00010 HLH 6.90E-07 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi08g01535 - - csv:101205943 581.637