Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi08g01538 AACAGAAAAACAAAAAGATAATGCCCTTTTCCTTCTGCAACCTTCCTCTTTTCTTCTCTTCAATTTTCTCCATCTCCTTCTTTAACTCTCTCTCTCTCTTTTTCTCTCATTTCCTCCTCACCTCACTGCAGTTATCTCTTTCTGTCAGCCTTCCTCCATTTCTTTTCCCATTCCCAAGAAACTCTTTTCAAACCCAACCTCCAAAAAACCACTAAAAAATTCAACTTCATCATCATCATCTTCATCATCATGCTTTCTAGAGTTGGGAACGTTCTTTGGATGGATAATCGCGACGATGAAGACTCTGCTTCCCACAACCATCTCAACCACCATGCTAATTGTTCTGGTTTGGACAACAAAGACGAAATCACTTCTCTCTCTACCTTTAAATCCATGCTCGAGGTTGAAGACGATTGGTGCATCTCTGCAAATGCTCTCCATAACCATAATCACCACACCGACATCAATGACATTACCTTCTCTCAGAATTTCACCGACCCTCCTGACAATTTGTTGCTCCCTCCTGGAGATTCCTCCTCTTCTTGTTCCCCTTCTTCCTCTATGTTTAATAACATTGACCCATCTCAATTGCGCTTCTTTTTACCCCCAACACGCACTTTGTCTTCACTTCATAAGGTAATTTCTAACAACCCTTTAGACCATGGCTTCGATTTGGGAGCAGAGGTTGGGTTTCTTGACGTTCAAGCTTCAAATGCTTCGACTCTGCTCAACGATGGAGGTGGGTTATTAACTGGTTTCACTGATTTAAGCCCAACTAGCCAGATGAACACTCCTAATTTGTGCTTAGGCTCTCAATTGACAGCCCCAAATTTGCCCCCAATGACTGACAATTGTTCGAGTTTAGCGGGATTCCAGAGTTTCGATGAGAATTTGGGAAATGCTCTGCTTCTGAATCGGTCTAAACTTTTGAGACCTCTAGAATCTTTTCCCTCGGTGGGAGCTCAACCAACTCTGTTTCAGAAGAGGGCAGCTCTAAGGAAGAGTTTAGCTGATAAGGGAAGCAACTTGGGGGTTTTGAGCCCCGATGGCGGCTGGTTTTCAAACAGGATTGAAGGAGGCATTGGAAAAAATGAAGTGGGTGATGAAAATGGGAAGAAGAGGAAAATGATTTATGCAGATGAATTGCAAGATACTAGCATCGATACATCCCGTTTCAATTACGATTCTGATGACTTTACTGAGAATACTAACACTAAATTGGATGATAGTGGAAGAAATGTTGGAAATACATCTAACGCCAATAGTACGGTGACCGGCGGCGACCAGAAGGGGAAGAAGAAAGGACTTCCGGCGAAGAATCTGATGGCTGAGAGGCGCCGGAGGAAGAAGCTCAATGATAGGCTGTACATGCTGAGGTCCGTTGTTCCAAAAATCAGCAAAATGGATAGAGCTTCAATTCTTGGGGATGCAATTGAGTACTTGAAGGAACTACTACAAAGAATCAATGACCTCCATAATGAACTGGAGTTTGCTCCTTCTGGGGCAGCCTTCACGCCAGGTGCAAGCTTCCACCCCCTGACTCCAACTCCGCCAAGCCTCTCGAGTCGTATAAAGGAGGAGCTTTGTCCTAGCTCATTTCCCAGCCCAAATGGCCAACCTGCAAGGGTCGAAGTTAGAGTACGAGAAGGACGGGCAGTAAATATACACATGTTTTGTGGTCGTCGACCGGGTCTCTTGCTCTCCACAGTTAGGGCATTAGATAATCTTGGATTAGACATCCAGCAGGCTGTGATTAGCTGCTTTAATGGTTTTGCTATGGACATTTTTCGAGCAGAGCAATGCAGCGAAGGTCAAGATGTCCATCCTGAGCAGATAAAAGCAATGTTATTGGATTCAGTTGGTTTCAATGGTGCGACATGAAAATCTGCGAGACAAACAAAGAATGCTCGTCCTTTGACAAACTGAATCATTTCAATCACAATTTACCTTGCTTTTTTTTCTCTCCTTAGGCTGACTTCTCTGTTGTTTTATCAGGAAAATAATTCCATTGTTGATTCAGAAGTAAAATCTTCTGAAATATTATATGCATTGACTTGCTGTTGAGATAATTATCACAATTTAAGGTTGCGGTTTGTGTAGCTA 2103 43.03 MLSRVGNVLWMDNRDDEDSASHNHLNHHANCSGLDNKDEITSLSTFKSMLEVEDDWCISANALHNHNHHTDINDITFSQNFTDPPDNLLLPPGDSSSSCSPSSSMFNNIDPSQLRFFLPPTRTLSSLHKVISNNPLDHGFDLGAEVGFLDVQASNASTLLNDGGGLLTGFTDLSPTSQMNTPNLCLGSQLTAPNLPPMTDNCSSLAGFQSFDENLGNALLLNRSKLLRPLESFPSVGAQPTLFQKRAALRKSLADKGSNLGVLSPDGGWFSNRIEGGIGKNEVGDENGKKRKMIYADELQDTSIDTSRFNYDSDDFTENTNTKLDDSGRNVGNTSNANSTVTGGDQKGKKKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIEYLKELLQRINDLHNELEFAPSGAAFTPGASFHPLTPTPPSLSSRIKEELCPSSFPSPNGQPARVEVRVREGRAVNIHMFCGRRPGLLLSTVRALDNLGLDIQQAVISCFNGFAMDIFRAEQCSEGQDVHPEQIKAMLLDSVGFNGAT 543
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 44167390 44170595 + XM_039038768.1 Bhi08g01538 41871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi08g01538 543 MobiDBLite consensus disorder prediction 320 345 - -
Bhi08g01538 543 Coils Coil 391 411 - -
Bhi08g01538 543 Gene3D - 346 415 IPR036638 GO:0046983
Bhi08g01538 543 CDD ACT_UUR-ACR-like 472 536 - -
Bhi08g01538 543 SMART finulus 358 407 IPR011598 GO:0046983
Bhi08g01538 543 CDD bHLH_AtAMS_like 355 419 - -
Bhi08g01538 543 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 352 401 IPR011598 GO:0046983
Bhi08g01538 543 PANTHER BHLH TRANSCRIPTIONAL FACTOR 95 541 - -
Bhi08g01538 543 Pfam Helix-loop-helix DNA-binding domain 359 401 IPR011598 GO:0046983
Bhi08g01538 543 MobiDBLite consensus disorder prediction 320 352 - -
Bhi08g01538 543 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 95 541 - -
Bhi08g01538 543 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 355 419 IPR036638 GO:0046983
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g02001 Bhi-Chr1:45327898 Bhi08g01538 Bhi-Chr8:44167390 5.48E-163 dispersed
Bhi04g00903 Bhi-Chr4:22898922 Bhi08g01538 Bhi-Chr8:44167390 1.26E-38 dispersed
Bhi07g01731 Bhi-Chr7:47821049 Bhi08g01538 Bhi-Chr8:44167390 4.63E-25 dispersed
Bhi07g01732 Bhi-Chr7:47821049 Bhi08g01538 Bhi-Chr8:44167390 4.13E-25 dispersed
Bhi10g00134 Bhi-Chr10:2938171 Bhi08g01538 Bhi-Chr8:44167390 1.33E-13 dispersed
Bhi08g01538 Bhi-Chr8:44167390 Bhi09g02536 Bhi-Chr9:68801824 2.19E-35 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1728 PF00010 HLH 2.00E-09 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi08g01538 - - csv:101206422 952.199