Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi08g01598 GCTAAGTTTGCATGCATTTTATTTCTTTATTTCATCTTCCTTTTCATTACTAATCATTGCTAAATGCCTAATTTAACATTTTATCAACTTTCTTCAATCTCTACTTTATGGTGGTGACTGAGATTGATGATGCACTCATATGGAGCATTATTCAATTTGATCCTCATAATTTATTAGTTTCTAACAACAAACCAAATCATACAAAGTGATATGGATTTCAGTGTGCCCTGTGATTTCCTTTTCTGGGAAATGTAATGAGGTTTTATAAGAGAAGAAAAAAGGAACCACAGTGTTTTGAATTATGGGGCATGTTAAAAAAGTGAAGAGGAGATGGAAAAAAAGGGAAAAAAGAAAACATTTTGGAGGGGCTTCTTTGTTGGGCTTGGAGTAAAGTCACTATCTTTAGTTTTTGCAATAATCTCATTGATGAAAGCAACTTGCTTCTGTTGAATTTCTCTGTGACCCCACGCCCAATTGTTGTAAATAAATTTCATCTGAGTTTTTATTCAAATTTTTCGGAATTGTTGATTCTCTCTTAAACAGCTTGTAATTTGTCCATTTTTCATCATTAAATTTTGGTTCAACAGGGTTTAACTTAAAATTTAAAAGTTGTTTGATTTAAAATTTACTTTCCTTTTTACAAGAAAATGGAAAAAATAATAGGAAAAGAAAAAAGAAAAGTTGGATACATACTTTAATAAGGGTAGATATTTGAATTTGCAGACTTGTGGTTACAATTATGCTCTGAAATGGCAGTCATTACGCTTTACAGTTGTATAAGCAACGCTGCAGAGAAATCAGATAACTGCTCAACCCCATGGCAGAACGGGATCCATTCCCTTCTACCCTTTTTCACTCACCATAATCTTTTCTTTTCCCATCTCTCTGTTCATCGATGATTCAACCCCAGAAAGAATTTCTAGCTAAAAATTCAAGTTCTTCTTTGATTTCCCTTTCCCTCGTGGTTCTTCAATCGTTTTCCTTTCCTCACATGGTGACCCTTTAGCCATTTTTGGCAGCTCCGATTGTTTTTGGGGTTTCTTGTTTTAGTTTTTGGATATGGCTATTCGAGGAGTCGATTTCAAATGGTTGATTATACCTCTGTGTTTGCATTTCGCCTTTTGCTGTTCATAGATAATGCACTTTCAGCTGGAATGGGATTAGATTTTGGATGGCAGCAGCGATATGCTCGGTTTTGTGGAAGAGTTGTGGTTCTTTCTGTCCTCTCTCTATTGCTCTACCCCTTTCTATGTGCCTGGACTGTAATTGGTACCCTGTGGTTTAGAGATGCTAAAGATTGTTTGCCTGAAGAAGGACAGAAATGGGGTTTCCTCATTTGGTTGCTTTTCAGCTACTGTGCCCTCCTTTGCATTGCCTGCATGTCAGTTGGAAAGTGGTTAGCGCGTAGACAAGCACACTTGTTTCGTGCCCAACAAGGCATGCCAGTATCAGAATATGGGGTACTGATCGACATGATTAGAGTTCCTGATTGGGCATATGAAGCTGCAGGACTGGAAATACGAGGCATTGGCCAAGATGCTACTGGTTACCATCCCGGGCTGTTCTTAACCTCGGCTCAGAGGGAAGCTGTGGAAGCTCTCATCCAGGAACTTCCAAAGTTTAGGCTGAAGGCTGTCCCAACCGATTGCAGTGAATGCCCTATTTGCCTTGAAGAGTTCCATGTAGGGAATGAGGTTCGTGGTATGCCGTGTGCACACAATTTCCATGTTGAATGTATCGACGAGTGGCTTCGTTTAAATGTTAAATGTCCTCGATGCCGCTCCTCGGTCTTCCCAAATCTCGATCTCAGCGCTCTTTCTAACCTGCATTCGGACACAGAACAAACATCTGACAATGCTTTTGTTACAACCCAACCTTCAAGTCTATTGAGATCAACCCCAACCCGGGCAGCACATACCGAAAATACAGCAGGCCTCTATACTGACACTGCCTTAGATGCTTTGGAGAATGGAAACTCATCCCTGCCATCTGCTTCTCCACATTGATCTACAGCCACCCCTTTGAACCATCTTAACCAAAACTCCTGAGAAAGATTCAACACTGATATAAACCAAAAAAAAAAAACAGAGAGATCACTGACATCTATAGTTCTATTCTAAATACTCCGAAAACTTGCCCAAAAAGTAAAGTTTTTGTTAGGTTTGAAGAGATGGTTATAAAATATTTATGAATCTGACAGTGACCTTCAAAGTTTTACCCATGGAGGAAAAAAGAGTTCACGTGGGTTTTCTCTATTAGGCCATGTTCATGGCTTGTGGATCCTTACAGATTCCTCACTACTTGACAAATATTTCCCATCAGATCATCCTCCCTTTCCATTTCCAACCCATCCTTTTGTCTTCTTTTCTTGTTTCTTCTCTTTTTTTTTTTTCATATATATTTTTTTCTTTTAATGTGAAAGATGTGTAAGTTTGTGACATTAATCATAGTAAGATTACAAACTAATTAAAACTCCCCTTGGCATAAGTCTATCTTTGCCACGATCGGTATCAAATCGGTTGTGAGAAGATCGGAATGGAACCTGGGATTTATCTT 2556 38.62 MVDYTSVFAFRLLLFIDNALSAGMGLDFGWQQRYARFCGRVVVLSVLSLLLYPFLCAWTVIGTLWFRDAKDCLPEEGQKWGFLIWLLFSYCALLCIACMSVGKWLARRQAHLFRAQQGMPVSEYGVLIDMIRVPDWAYEAAGLEIRGIGQDATGYHPGLFLTSAQREAVEALIQELPKFRLKAVPTDCSECPICLEEFHVGNEVRGMPCAHNFHVECIDEWLRLNVKCPRCRSSVFPNLDLSALSNLHSDTEQTSDNAFVTTQPSSLLRSTPTRAAHTENTAGLYTDTALDALENGNSSLPSASPH 306
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
8 45922834 45927367 + XM_039039496.1 Bhi08g01598 41931
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bhi08g01598 306 SMART ring_2 191 231 IPR001841 -
Bhi08g01598 306 MobiDBLite consensus disorder prediction 253 274 - -
Bhi08g01598 306 SUPERFAMILY RING/U-box 172 240 - -
Bhi08g01598 306 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 160 237 IPR013083 -
Bhi08g01598 306 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SIS3 1 283 IPR044793 GO:0004842|GO:0010182
Bhi08g01598 306 Pfam Ring finger domain 190 232 IPR001841 -
Bhi08g01598 306 ProSiteProfiles Zinc finger RING-type profile. 191 232 IPR001841 -
Bhi08g01598 306 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SIS3 1 283 - -
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Bhi02g00435 Bhi08g01598 CCT
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi02g00435 Bhi-Chr2:8209428 Bhi08g01598 Bhi-Chr8:45922834 1.55E-165 dispersed
Bhi08g01598 Bhi-Chr8:45922834 Bhi08g01600 Bhi-Chr8:45923235 0 dispersed
Bhi08g01597 Bhi-Chr8:45922829 Bhi08g01598 Bhi-Chr8:45922834 0 tandem
Bhi08g01598 Bhi-Chr8:45922834 Bhi08g01599 Bhi-Chr8:45923233 0 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi08g01598 K16284 - csv:101222360 594.349