Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi08g01600 TTTAGTTTTTGCAATAATCTCATTGATGAAAGCAACTTGCTTCTGTTGAATTTCTCTGTGACCCCACGCCCAATTGTTGTAAATAAATTTCATCTGAGTTTTTATTCAAATTTTTCGGAATTGTTGATTCTCTCTTAAACAGCTTGTAATTTGTCCATTTTTCATCATTAAATTTTGGTTCAACAGGGTTTAACTTAAAATTTAAAAGTTGTTTGATTTAAAATTTACTTTCCTTTTTACAAGAAAATGGAAAAAATAATAGGAAAAGAAAAAAGAAAAGTTGGATACATACTTTAATAAGGGTAGATATTTGAATTTGCAGACTTGTGGTTACAATTATGCTCTGAAATGGCAGTCATTACGCTTTACAGTTGTATAAGCAACGCTGCAGAGAAATCAGATAACTGCTCAACCCCATGGCAGAACGGGATCCATTCCCTTCTACCCTTTTTCACTCACCATAATCTTTTCTTTTCCCATCTCTCTGTTCATCGATGATTCAACCCCAGAAAGAATTTCTAGCTAAAAATTCAAGTTCTTCTTTGATTTCCCTTTCCCTCGTGGTTCTTCAATCGTTTTCCTTTCCTCACATGGTGACCCTTTAGCCATTTTTGGCAGCTCCGATTGTTTTTGGGGTTTCTTGTTTTAGTTTTTGGATATGGCTATTCGAGGAGTCGATTTCAAATGGTACGATGGGTTCTTCTTGTCTATGCTTGCTACTAAATAATTGTGACCATCAATTGGAGAAGGTACAATACTTGTACGTATCCTTTGCACATATGGATTGTGGTTGATTATACCTCTGTGTTTGCATTTCGCCTTTTGCTGTTCATAGATAATGCACTTTCAGCTGGAATGGGATTAGATTTTGGATGGCAGCAGCGATATGCTCGGTTTTGTGGAAGAGTTGTGGTTCTTTCTGTCCTCTCTCTATTGCTCTACCCCTTTCTATGTGCCTGGACTGTAATTGGTACCCTGTGGTTTAGAGATGCTAAAGATTGTTTGCCTGAAGAAGGACAGAAATGGGGTTTCCTCATTTGGTTGCTTTTCAGCTACTGTGCCCTCCTTTGCATTGCCTGCATGTCAGTTGGAAAGTGGTTAGCGCGTAGACAAGCACACTTGTTTCGTGCCCAACAAGGCATGCCAGTATCAGAATATGGGGTACTGATCGACATGATTAGAGTTCCTGATTGGGCATATGAAGCTGCAGGACTGGAAATACGAGGCATTGGCCAAGATGCTACTGGTTACCATCCCGGGCTGTTCTTAACCTCGGCTCAGAGGGAAGCTGTGGAAGCTCTCATCCAGGAACTTCCAAAGTTTAGGCTGAAGGCTGTCCCAACCGATTGCAGTGAATGCCCTATTTGCCTTGAAGAGTTCCATGTAGGGAATGAGGTTCGTGGTATGCCGTGTGCACACAATTTCCATGTTGAATGTATCGACGAGTGGCTTCGTTTAAATGTTAAATGTCCTCGATGCCGCTCCTCGGTCTTCCCAAATCTCGATCTCAGCGCTCTTTCTAACCTGCATTCGGACACAGAACAAACATCTGACAATGCTTTTGTTACAACCCAACCTTCAAGTCTATTGAGATCAACCCCAACCCGGGCAGCACATACCGAAAATACAGCAGGCCTCTATACTGACACTGCCTTAGATGCTTTGGAGAATGGAAACTCATCCCTGCCATCTGCTTCTCCACATTGATCTACAGCCACCCCTTTGAACCATCTTAACCAAAACTCCTGAGAAAGATTCAACACTGATATAAACCAAAAAAAAAAAACAGAGAGATCACTGACATCTATAGTTCTATTCTAAATACTCCGAAAACTTGCCCAAAAAGTAAAGTTTTTGTTAGGTTTGAAGAGATGGTTATAAAATATTTATGAATCTGACAGTGACCTTCAAAGTTTTACCCATGGAGGAAAAAAGAGTTCACGTGGGTTTTCTCTATTAGGCCATGTTCATGGCTTGTGGATCCTTACAGATTCCTCACTACTTGACAAATATTTCCCATCAGATCATCCTCCCTTTCCATTTCCAACCCATCCTTTTGTCTTCTTTTCTTGTTTCTTCTCTTTTTTTTTTTTCATATATATTTTTTTCTTTTAATGTGAAAGATGTGTAAGTTTGTGACATTAATCATAGTAAGATTACAAACTAATTAAAACTCCCCTTGGCATAAGTCTATCTTTGCCACGATCGGTATCAAATCGGTTGTGAGAAGATCGGAATGGAACCTGGGATTTATCTT 2257 39.61 MGLDFGWQQRYARFCGRVVVLSVLSLLLYPFLCAWTVIGTLWFRDAKDCLPEEGQKWGFLIWLLFSYCALLCIACMSVGKWLARRQAHLFRAQQGMPVSEYGVLIDMIRVPDWAYEAAGLEIRGIGQDATGYHPGLFLTSAQREAVEALIQELPKFRLKAVPTDCSECPICLEEFHVGNEVRGMPCAHNFHVECIDEWLRLNVKCPRCRSSVFPNLDLSALSNLHSDTEQTSDNAFVTTQPSSLLRSTPTRAAHTENTAGLYTDTALDALENGNSSLPSASPH 283
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
8 45923235 45927367 + XM_039039498.1 Bhi08g01600 41933
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bhi08g01600 283 Pfam Ring finger domain 167 209 IPR001841 -
Bhi08g01600 283 SMART ring_2 168 208 IPR001841 -
Bhi08g01600 283 ProSiteProfiles Zinc finger RING-type profile. 168 209 IPR001841 -
Bhi08g01600 283 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SIS3 1 260 - -
Bhi08g01600 283 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SIS3 1 260 IPR044793 GO:0004842|GO:0010182
Bhi08g01600 283 SUPERFAMILY RING/U-box 149 217 - -
Bhi08g01600 283 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 137 214 IPR013083 -
Bhi08g01600 283 MobiDBLite consensus disorder prediction 230 251 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi08g01598 Bhi-Chr8:45922834 Bhi08g01600 Bhi-Chr8:45923235 0 dispersed
Bhi08g01600 Bhi-Chr8:45923235 Bhi10g00489 Bhi-Chr10:11003784 5.49E-13 dispersed
Bhi08g01599 Bhi-Chr8:45923233 Bhi08g01600 Bhi-Chr8:45923235 0 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi08g01600 K16284 - csv:101222360 552.747