Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi08g01650 ATGGGATCAACAACAACAAGCAACAGCCATTATTACAGCCCTTGTGCAGCCTGCAAATTCCTAAGAAGAAAATGCTTAGCAGCATGTGTTTTTGCACCCTATTTTCCACCTGAAGATCCCCAAAAATTTGCCAATGTCCACAAGGTATTCGGAGCAAGTAACGTGGCAAAGCTCCTCAACGATGTTCTTCCTCATCAACGACAAGACGCCGTCGTTTCACTCGCTTACGAAGCCGAGGCGAGAATCAGAGATCCTGTATATGGGTGTGTTGGGGCAATTTCTTTCCTCCAAAAACAGGTCCAAAGACTCCAAAAGGAACTTGATGCTGCCAAAGCTCGCCTTTTTCTCTATTCTAGCACTGATTTCTCAACTCCCTTTTTGCCTCCTCACCCTCAGATTATTACTACTCCTCATCCACTGATTTGGAATAATAATCTTAATCTTCATAATAATAATAATGATATTATCACTAATTATTCTTCTATGTATTTTAATGGAGGAATTTGA 507 40.83 MGSTTTSNSHYYSPCAACKFLRRKCLAACVFAPYFPPEDPQKFANVHKVFGASNVAKLLNDVLPHQRQDAVVSLAYEAEARIRDPVYGCVGAISFLQKQVQRLQKELDAAKARLFLYSSTDFSTPFLPPHPQIITTPHPLIWNNNLNLHNNNNDIITNYSSMYFNGGI 168
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 46580059 46580565 - XM_039039987.1 Bhi08g01650 41983
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi08g01650 168 PANTHER PROTEIN LATERAL ORGAN BOUNDARIES 7 134 - -
Bhi08g01650 168 Coils Coil 93 113 - -
Bhi08g01650 168 Pfam Lateral organ boundaries (LOB) domain 14 111 IPR004883 -
Bhi08g01650 168 ProSiteProfiles LOB domain profile. 13 114 IPR004883 -
Bhi08g01650 168 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 7 134 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bhi02g00500 Bhi08g01650 CCT
Bhi02g00500 Bhi08g01650 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi08g01650 Bhi-Chr8:46580059 Bhi11g01604 Bhi-Chr11:46239538 8.80E-61 dispersed
Bhi02g00500 Bhi-Chr2:9678665 Bhi08g01650 Bhi-Chr8:46580059 4.11E-65 wgd
Bhi06g00551 Bhi-Chr6:12401586 Bhi08g01650 Bhi-Chr8:46580059 1.88E-61 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1732 PF03195 LOB 1.70E-41 No_clan Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi08g01650 - - zju:107418298 204.912