Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi08g01685 TTTTTCTCACATCTCTCACTCCTTCATTTTTCCACTCACAAATGGCACCGCCTACAGTCCCTCTCTCTCTCCTCTCCCTCTTCCTCTTCTCTGTTTCTCTCTCCGCCGCCATCTCTGCAGCCCCTGCCGCCGTTCCCAACCCCGAACTTGTCGTAGATGAAGTACACAGAAGCATAATCAATGCGACCAAGAGGAGGAATTTAGGGTATCTCTCATGTGGGACTGGAAATCCAATCGACGATTGCTGGCGGTGCGATTCCAATTGGGTGAAAAATCGTCAGAGACTAGCCGACTGTGGAATCGGATTCGGCAAAAACGCCATTGGCGGCCGTGACGGCCAAATCTACGTCGTCACCGACGCCGGCGATGACGATCCGGTTAACCCCAAACCAGGAACTCTCCGTTACGCCGTAATCCAAGACGAACCCCTCTGGATCATCTTCGCTCGCGATATGGTGATTCGATTGAAAGAAGAACTGATTATGAATTCCTTCAAAACCATCGACGGCCGTGGTGCTAGTGTTCATATCGCGGGTGGGCCTTGCATTACGATTCAGTACGTGACGAACATTATAATCCACGGTCTCAACATTCACGACTGTAAACCAGGGGGAAACACAGACGTGAGAGATTCCCCTCGGCATTTCGGATTCAGAACGATATCGGACGGCGACGGCATTTCGATCTTCGGCGGGAGCCATGTTTGGGTTGATCATTGCTCTTTATCAAACTGTAACGATGGATTAATCGACGCGATTCATGGGTCTACAGCGATTACGATTTCGAACAATTACATGACGCATCATGATAAAGTGATGTTGTTGGGGCACAGTGATTCGTATACTCAAGACAAGAATATGCAAGTCACCATTGCTTTCAACCATTTCGGTGAAGGTCTTGTTCAAAGAATGCCCAGATGCAGACATGGGTATTTTCATGTGGTGAATAATGACTATACGCATTGGGAAATGTACGCCATTGGAGGAAGTGCTGCTCCAACAATCAACAGTCAAGGGAACAGATTTGTTGCACCAAATGACAGATTCAGCAAAGAGGTGACAAAATACGAGGATGCACCGGAGAGTGAGTGGAGGAATTGGCATTGGAGGTCAGAAGGAGATCTGATGCTAAACGGTGCGTTTTTCACTGCCTCTGGTGCCGGAGCGTCATCCAGTTACGCTAGAGCATCAAGCTTAGGTGCGAGACCGTCATCGCTCGTTGGTACAATTACGACCAATGCAGGTGCACTGAACTGCAAAAAGGGCTCCCGCTGCTGATTATTACTCCTACCCAATTTGAAACCAAAAAAGGAACTGAAATTTGAAAGACTGGTAGTAGCTAGTTCTAGTTGGTTGGTTGATTTTCTTAAAGTTTAAATTAAAATTGTTGATTTTATGAAATGGTAATTTGAGGGAAAATCAGTAGGAAATGGAGGGAAAGTAAAAGAGGAAAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAGCTAAGATAAGACACTGAACCAATAGTGGTCAGTGAATCTGCTTCTTTCATTATATCTTTTTTTAGTTATTTTCTTCTTTTTTCTCTTCCATTTTATTTTTTGTTTATTGGTTTTGGGTTGTTTTTATAATTATTACAATGTACAACCTCCGCATGTAATTCTTGGAAACATTGGGGCTTTCCTTTTAAGAATGTCCCAAATCAAGTCAAATGCAGAAGAGTTGATATTTCATATACTAA 1724 43.91 MAPPTVPLSLLSLFLFSVSLSAAISAAPAAVPNPELVVDEVHRSIINATKRRNLGYLSCGTGNPIDDCWRCDSNWVKNRQRLADCGIGFGKNAIGGRDGQIYVVTDAGDDDPVNPKPGTLRYAVIQDEPLWIIFARDMVIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHDCKPGGNTDVRDSPRHFGFRTISDGDGISIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSAAPTINSQGNRFVAPNDRFSKEVTKYEDAPESEWRNWHWRSEGDLMLNGAFFTASGAGASSSYARASSLGARPSSLVGTITTNAGALNCKKGSRC 411
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
8 47635954 47638519 - XM_039039482.1 Bhi08g01685 42018
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bhi08g01685 411 Gene3D - 62 404 IPR012334 -
Bhi08g01685 411 PRINTS Pollen allergen Amb family signature 85 102 IPR018082 -
Bhi08g01685 411 PRINTS Pollen allergen Amb family signature 109 134 IPR018082 -
Bhi08g01685 411 PRINTS Pollen allergen Amb family signature 145 161 IPR018082 -
Bhi08g01685 411 PRINTS Pollen allergen Amb family signature 209 230 IPR018082 -
Bhi08g01685 411 PRINTS Pollen allergen Amb family signature 289 308 IPR018082 -
Bhi08g01685 411 PRINTS Pollen allergen Amb family signature 311 330 IPR018082 -
Bhi08g01685 411 PRINTS Pollen allergen Amb family signature 353 377 IPR018082 -
Bhi08g01685 411 PRINTS Pollen allergen Amb family signature 382 405 IPR018082 -
Bhi08g01685 411 SMART amb_all 137 334 IPR002022 -
Bhi08g01685 411 PANTHER PECTATE LYASE 18-RELATED 12 408 IPR045032 GO:0030570
Bhi08g01685 411 Pfam Pectate lyase 147 328 IPR002022 -
Bhi08g01685 411 SUPERFAMILY Pectin lyase-like 38 405 IPR011050 -
Bhi08g01685 411 PANTHER PECTATE LYASE 12 408 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g00614 Bhi-Chr3:11746897 Bhi08g01685 Bhi-Chr8:47635954 9.80E-147 dispersed
Bhi04g00601 Bhi-Chr4:14312324 Bhi08g01685 Bhi-Chr8:47635954 0 dispersed
Bhi06g00597 Bhi-Chr6:13374485 Bhi08g01685 Bhi-Chr8:47635954 0 dispersed
Bhi08g01685 Bhi-Chr8:47635954 Bhi12g01517 Bhi-Chr12:49105909 0 dispersed
Bhi08g01809 Bhi-Chr8:52595514 Bhi08g01685 Bhi-Chr8:47635954 2.94E-146 dispersed
Bhi08g01685 Bhi-Chr8:47635954 Bhi12g01516 Bhi-Chr12:49105909 0 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi08g01685 K01728 - csv:101209736 765.377