Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi08g01783 ATTTTCCCCCATAACTCTAAGAGAAAAAGAAAAGGGCCCTAATTCTCTCTTCTATTCATCTCTTCACCATAATCAATCATCAGAAAATTTAAAAATCAAAAATCAAAAATCAAAGGTGGTAGTTTAAATGGAATCTTGAGTACTGAAACTCAGGGGAAAAGCGTTTGAACGTTTTAGTTTTCGTGTCTTGGTTTTTGTGTTTCTTAAAAACTCAAGTTGTCGGTGTCTGTTGTTTTGTCCCCAATCATCCTTCTCCACCTCCTTATGTTCTTTTTTTTCAGTTGCTGTTATTTACTACGTTAACCTCTTTGTCTATTTTGGCCTTGTTTTCCTCATTCTGTTTCAAAACCTCTCCCTTAGCTTATTGTCAACGCCAACTATCTTTAATTGTCTTCCCAACTTCAAAGAAAGAAAGCAAAAAAGAGGGTTTTATTTAAGGGTTTCTTCAAGTGCTGATTATTTGTTGAAGCCTTTATTCACATTGCATGGCAACCAATACTAAGCTTCACTCTCTCACCTCCCATCTCAATTCAACAAGGAAGCTAAGAATATTGAGGAAGGAAGAGATGTTTGGAGGACATGGTTTTGAAGATCATCATGAGGATCTACTACTAGAGATGACACAGAAAAACTTTGAAGCTGAACTGGAAAAATTTGGAGAAGATGAGTTCGAGAGTAGATCGGTGACCGACGCCATGGAAGCTTCTTTGGGAGAGGAACATTGTGTTCTTAATCAGAGAAATAAGAGGAAGCGTTACCATCGCCATACTCAGCTTCAAATCCAGGAAATGGAAGCGTTCTTTAAGGAGTGTCCACATCCAGATGACAAGCAAAGAAAGCAGCTGAGCCATGAGTTAGGACTCGAACCCCTCCAAGTCAAGTTCTGGTTTCAAAACAAGCGCACCCAAATCAAGGCTCAACAAGAACGGACTGAGAATGCAATATTGAAATCTCAAAACGAGAAACTAAGAGCAGAAAACATGAGGTACAAGGAAGCTCTAAGCAACACAAGTTGCCGAAATTGTGGAGGTCCTGCTGCTCTTGGAGAGATGTCCTTTGATGCCCAACATTTGAGAATTGACAATGCACATTTAAGAGATGAGATAGAGAGATTAAACAGTAGTAGCAAATATGGTGGGAAGGCATGGGGTTCCCATTCTTCTCATATTGTTCCATGTGGAGGGCAGCTTGATCATCTTGGGGTTGGAAGATCATCATTAAATTTAAAGCCGGGCCAACAGTTGAAAGCAGATGATCATAATTTGTTAGGGGAAATGTATGGATCAGTGGGAGATCAGACGATGACGTTAAAATCATCTGTGACTACTGAAATTGATAAGCCAGTAATTGTTGAGCTTGCAGTTTCAGCCATGGAAGAAGTGTGTAAAATGGCTCAAGCAGGTGAGCCATTGTGGGTTACTGGTGAAAACTCCATGGAAATGCTGAATGAAGATGAGTACTTGAGGACTTATTCTACAAGAATTGGCCCTAGAATTGTGGGACTAAGCTTTGAAGCTTCAAGGCAAACTTCCATTCTTGCTTTTAATCATCTAAAACTTGTCCACATTCTCATGGACGTGAATCAATGGTCAACCGTATTTTGCGAGATTGTTTCAAGAGCATCGACACTGGAAGTCTTATCATCTGGAGTTGGTAATGACTATAATGGAGCTCTACAAATCATGACGGCAGAGTTGCAAGTAGCTTCTCCTTTGGTTCCGACTCGAGAAATTTACTTCGTAAGATACTGTAAGCAGCAGGCAGACAGAAGTTGGGCTGTGGTCGATGTTTCACTCGATTATTTACGCCCCACTCCTACTTCAAGGACTCGAAGAAGACCATCTGGTTGCTTAATCCAAGAACTTCCCAATGGTTACTCAAAGGTGACATGGGTGGAACATGTAGAAGTGGATGATCGAGCAGTACACAATTTGTACAAACGAGTGGTGACATGTGGTCTTGCCTTCGGCGCGAAACGATGGATGGCTACTCTCGATCGACAATGCCAACGCCTAACCAACTCCTCATCTACCAATATTCCTGCACTAGACATATGCGGGCAAGAGGGGAGGAAGAGCGTAATGAAGTTAGCAGAGAGAATGGTGAGGAGTTTCTGCAGTGGCGTTGGGGCTGCTACTGCACAAAACTGGACCACATTATCCACCATTGATTCCGACGATGTTCGTGTCATGGCGAGAAAGAGCCTCGACGACCCAGGTCGACCTCCTGGAATTGTTCTCAATGCAGCAACTTCTTTCTGGATTCCAATTCTCCCTAATAGGGTTTTCCATTTCCTCCGAGACGAAAACACCCGCAATCAGTGGGATATACTTTCAAACGGTGGGTTAGTTCAAGAAATGGCTCGAATTGGCAACGATCGAAACCCAGGAAACTGTGTGTCATTACTTCGTGTTAATAGTGCAAATTCAAGTCAAAGCAACATGTTGATACTACAAGAGAGCCGCAGCGACGACATCACCGGTTCCTACATAATCTACGCCCCAGTCGACACCGTCGCCATGAACGTGGTTTTAAGCGGCGGTGACCCTGATTACGTGGCTCTCTTGCCATCTGGATTCGCCATTCTCCCTGATGGGCCGCCCATTGGGCCTGATGGGCCTCCAGCAATTCTCGAATTCGGGTCCGGTGGTTCCTTGTTGACCGTTGCTTTTCAGATATTAGTGGACTCGGTTCCAACTGCCAAATTATCTCTTGGGTCGGTGGCGACGGTGAACAGCCTCATCAAGTGCACGGTGGAGCGGATTAGAGCTGCACTCATGTGTGACCAACCCATGAATTAATTATATTTTTCATAGACACTATTTTATGTTTTTCCTTTTTTCTTTAATTAATTTCAAAAGAGTGAGCTATATAAAGAAATTAAACAGAGTAGAAGGGAGGAAGAGGAGTCAAAAACGAACCTTG 2925 42.87 MATNTKLHSLTSHLNSTRKLRILRKEEMFGGHGFEDHHEDLLLEMTQKNFEAELEKFGEDEFESRSVTDAMEASLGEEHCVLNQRNKRKRYHRHTQLQIQEMEAFFKECPHPDDKQRKQLSHELGLEPLQVKFWFQNKRTQIKAQQERTENAILKSQNEKLRAENMRYKEALSNTSCRNCGGPAALGEMSFDAQHLRIDNAHLRDEIERLNSSSKYGGKAWGSHSSHIVPCGGQLDHLGVGRSSLNLKPGQQLKADDHNLLGEMYGSVGDQTMTLKSSVTTEIDKPVIVELAVSAMEEVCKMAQAGEPLWVTGENSMEMLNEDEYLRTYSTRIGPRIVGLSFEASRQTSILAFNHLKLVHILMDVNQWSTVFCEIVSRASTLEVLSSGVGNDYNGALQIMTAELQVASPLVPTREIYFVRYCKQQADRSWAVVDVSLDYLRPTPTSRTRRRPSGCLIQELPNGYSKVTWVEHVEVDDRAVHNLYKRVVTCGLAFGAKRWMATLDRQCQRLTNSSSTNIPALDICGQEGRKSVMKLAERMVRSFCSGVGAATAQNWTTLSTIDSDDVRVMARKSLDDPGRPPGIVLNAATSFWIPILPNRVFHFLRDENTRNQWDILSNGGLVQEMARIGNDRNPGNCVSLLRVNSANSSQSNMLILQESRSDDITGSYIIYAPVDTVAMNVVLSGGDPDYVALLPSGFAILPDGPPIGPDGPPAILEFGSGGSLLTVAFQILVDSVPTAKLSLGSVATVNSLIKCTVERIRAALMCDQPMN 771
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 51535559 51545927 + XM_039038185.1 Bhi08g01783 42116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi08g01783 771 ProSiteProfiles 'Homeobox' domain profile. 85 145 IPR001356 GO:0003677
Bhi08g01783 771 Coils Coil 144 178 - -
Bhi08g01783 771 SMART HOX_1 86 149 IPR001356 GO:0003677
Bhi08g01783 771 ProSiteProfiles START domain profile. 281 512 IPR002913 GO:0008289
Bhi08g01783 771 CDD START_ArGLABRA2_like 285 508 - -
Bhi08g01783 771 Gene3D - 344 509 IPR023393 -
Bhi08g01783 771 SMART START_1 290 509 IPR002913 GO:0008289
Bhi08g01783 771 Gene3D - 77 161 - -
Bhi08g01783 771 SUPERFAMILY Bet v1-like 281 510 - -
Bhi08g01783 771 Pfam Homeodomain 88 143 IPR001356 GO:0003677
Bhi08g01783 771 SUPERFAMILY Bet v1-like 533 761 - -
Bhi08g01783 771 SUPERFAMILY Homeodomain-like 73 146 IPR009057 -
Bhi08g01783 771 Pfam START domain 291 509 IPR002913 GO:0008289
Bhi08g01783 771 CDD homeodomain 88 146 IPR001356 GO:0003677
Bhi08g01783 771 ProSitePatterns 'Homeobox' domain signature. 120 143 IPR017970 GO:0000981|GO:0006355
Bhi08g01783 771 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 51 767 IPR042160 -
Bhi08g01783 771 Coils Coil 193 213 - -
Bhi08g01783 771 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN PROTODERMAL FACTOR 2 51 767 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi08g01783 Bhi-Chr8:51535559 Bhi10g01447 Bhi-Chr10:34590065 0 dispersed
Bhi08g01782 Bhi-Chr8:51535559 Bhi08g01783 Bhi-Chr8:51535559 0 tandem
Bhi08g01783 Bhi-Chr8:51535559 Bhi08g01784 Bhi-Chr8:51535559 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1742 PF01852 START 9.10E-50 CL0209 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi08g01783 K09338 - csv:101212604 1305.81