Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi08g01809 ATGGCTTCAAACTCCTCCCACCTTCTACTAATCCTTCTCTTCGTTCTCTCATTCATCAATCCCTCCCTTCAGGATTACTACACTCCCGACAAGAAAAACATGAATATAATCGACTCGTGCTGGCGTCGAACCGCCAATAATTGGGCCAAAAACCGCCAAGCCTTAGCTGACTGCGCCGTTGGCTACGGCAAGGATGCAATCGGAGGCAAATTTGGAACCATTTACGTCGTCACCGACCCATCTGACAACCCTTCAAACCCAAAATACGGAACGTTACGATACGGTGTGATCCAAGACAAGCCATTGTGGATTGTGTTTGGTAAGGACATGGTTATTGTGTTGAAGAATGAGCTGATGGTAAATAGTTTCAAGACCATTGATGGACGTGGGGCTAAAGTGGAAATTGCTTATGGGCCTTGTATTACGGTTCAAGGGGTTAGCCATGTTATTATACATGGAATTAGTATTCATCATTGTAAGCCTGGCAAAGCTGGGCTTGTTAGAGATACTGTGTCGCATGTTGGGAAACGTAAAGGGGCTGATGGTGATGCTATTGCTGTGTTTGGTTCTTCACATGTTTGGATTGATCATTGTTTTTTAGCTCGATGTACTGATGGTCTTGTTGATGTTATTCATGCTTCCACTTCTGTCACTATCTCAAATAACTACTTCTCCCAACATGATAAGGTGATGTTGCTTGGACATAATGATGGGTACACTGATGATAAAATTATGAGGGTCACCATTGTTTTCAACCGCTTTGGTGCTGGCCTTATTGAGAGGATGCCAAGGGTTAGGTTTGGTTACGCTCATGTAGCCAACAATAGATACGACGAGTGGAAAATGTACGCGATTGGTGGAAGTGCAAACCCCACAATCTTCAGTGAAGGAAACTACTTTGTAGCTCCCCAAAATTCTAATGCCAAGCAGGTTACAAAGAGGGAAGTTAATAATGGGTGGAAGAACTGGAAATGGAGGTCCTCCAGAGATGTGTTCTTAAATGGTGCTTATTTTGTGCCATCAGGATGGGGAAGCTGCAGTCCAATTTACACAAAAGCTCAGTCTTTTCCAGTGGCTCCTGGCCCTATGGTTCCTGCTTTGACTGCAAATGCTGGCCCACTTCGTTGTTTTGTCGGCAAACCCTGTTAATTAAAAATCTGTTTGGATTGACGTTTTAAGTGTCTAAATTTTTTTTAATCGTTTAAGATGGTCAATCCAAACAAACCCTAAATTTCAAACGTACTTTCGGTACTCTGTTTGT 1261 42.98 MASNSSHLLLILLFVLSFINPSLQDYYTPDKKNMNIIDSCWRRTANNWAKNRQALADCAVGYGKDAIGGKFGTIYVVTDPSDNPSNPKYGTLRYGVIQDKPLWIVFGKDMVIVLKNELMVNSFKTIDGRGAKVEIAYGPCITVQGVSHVIIHGISIHHCKPGKAGLVRDTVSHVGKRKGADGDAIAVFGSSHVWIDHCFLARCTDGLVDVIHASTSVTISNNYFSQHDKVMLLGHNDGYTDDKIMRVTIVFNRFGAGLIERMPRVRFGYAHVANNRYDEWKMYAIGGSANPTIFSEGNYFVAPQNSNAKQVTKREVNNGWKNWKWRSSRDVFLNGAYFVPSGWGSCSPIYTKAQSFPVAPGPMVPALTANAGPLRCFVGKPC 382
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 52595514 52597780 + XM_039039681.1 Bhi08g01809 42142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi08g01809 382 PANTHER PECTATE LYASE 16-RELATED 19 380 - -
Bhi08g01809 382 PRINTS Pollen allergen Amb family signature 58 75 IPR018082 -
Bhi08g01809 382 PRINTS Pollen allergen Amb family signature 81 106 IPR018082 -
Bhi08g01809 382 PRINTS Pollen allergen Amb family signature 117 133 IPR018082 -
Bhi08g01809 382 PRINTS Pollen allergen Amb family signature 181 202 IPR018082 -
Bhi08g01809 382 PRINTS Pollen allergen Amb family signature 261 280 IPR018082 -
Bhi08g01809 382 PRINTS Pollen allergen Amb family signature 283 302 IPR018082 -
Bhi08g01809 382 PRINTS Pollen allergen Amb family signature 323 347 IPR018082 -
Bhi08g01809 382 PRINTS Pollen allergen Amb family signature 353 376 IPR018082 -
Bhi08g01809 382 SMART amb_all 109 306 IPR002022 -
Bhi08g01809 382 Gene3D - 34 375 IPR012334 -
Bhi08g01809 382 Pfam Pectate lyase 116 300 IPR002022 -
Bhi08g01809 382 PANTHER PECTATE LYASE 18-RELATED 19 380 IPR045032 GO:0030570
Bhi08g01809 382 SUPERFAMILY Pectin lyase-like 34 373 IPR011050 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bhi03g00614 Bhi08g01809 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi08g01809 Bhi-Chr8:52595514 Bhi08g01685 Bhi-Chr8:47635954 2.94E-146 dispersed
Bhi08g01997 Bhi-Chr8:57583258 Bhi08g01809 Bhi-Chr8:52595514 4.87E-108 dispersed
Bhi08g01998 Bhi-Chr8:57583261 Bhi08g01809 Bhi-Chr8:52595514 1.20E-107 dispersed
Bhi03g00614 Bhi-Chr3:11746897 Bhi08g01809 Bhi-Chr8:52595514 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi08g01809 K01728 - csv:101211379 743.421