Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi08g01833 CACTCATTTCTCACTCCTTTCTTGCGAACGAGAGCCACCCTCGCCAATGAATGAAGATAAGACTTTACCCCAAGAATAACCTGAACCCCTTCTTTGCAGCCTCTCTTCACCGCCAAACTAGAGCTCACCTCCCTCCTCGGCTGCTAAACCATGTCTTGTTCAAATCTGACTATGTGGGTGTCTTCAAAACCCACTGTTTCTGATGCATCTTCCCTTTCTTTCCGCTCATTTTTGAGCCCTTTCCAGCTCCCTTCCCAGAATTCAAGCCCTGCTCGATCATGGTCGGTTTCTCCAATCCATTGCGGTCTTCGGGAGCTTCGAGATCGTATCGATTCGGTGAAGAACACCCAGAAGATCACTGAAGCTATGAAGCTTGTTGCTGCTGCCAAAGTCCGCAGAGCTCAAGAAGCAGTTGTTAATGGAAGACCCTTCTCAGAAGCTTTGGTTGAAGTCCTTTACAACATCAATGAGCAACTTCAAACAGAAGATGTTGATGTTCCTTTAACCAAAGTAAGACCTGTTAAGAAAGTTGCATTAGTTGTTGTCACGGGTGATAGAGGTCTTTGTGGTGGTTTCAACAATACCATCATTAAGAAAGCTGAAGCCAGAATATCAGAATTGAAGGCACTTGGTCTTGATTACACTGTCATTAGTGTTGGCAAGAAGGGTAATTCCTATTTCCTTCGCCGACCTTACATCCCGGTCGATAAGTTCCTTGAAGGTGGCACTCTTCCCACAGCTAAAGAAGCTCAAGCAATAGCTGATGATGTTTTTTCACTCTTTGTTAGCGAAGAAGTTGATAAAGTAGAGCTTTTGTACACGAAATTCGTGTCGTTGATAAAATCCGATCCTGTAATTCACACTCTTCTTCCACTCTCACCCAAGGGTGAGATCTGTGATATAAATGGAGTATGTGTAGATGCTGCAGAAGATGAGTTTTTCAGGTTGACAACAAAGGAAGGGAAATTGACAGTGGAAAGGGATTCAGTGAGGACAAGCACATCAGATTTTTCACCAATTTTGGAGTTTGAGCAAGACCCAGTTCAGATCTTGGATGCTTTATTGCCTTTGTATTTGAACAGCCAGATTTTGAGGGCATTGCAAGAGTCATTGGCTAGTGAACTTGCAGCTAGAATGAGTGCTATGAGTAATGCAACTGATAATGCTTCTGAGCTGAAGAGAACTCTGTCTATTGTATATAATAGACAGCGCCAAGCTAAGATTACTGGAGAAATCTTGGAGATTGTTGCTGGTGCTAATGCCTTGACTTAATTTGATGTTTGTGTATATCTCCTCCCATGTTTGCTTGCTTTTTCCTCTTCCTTCCCCTTACATACATCCCATGTTTCTATATTCAATGATCTCATTCAAATTATGCAGTTTCTATAGAATATATGCAAATTGTAAGTCTTTCATGTTCTGCTTCTTCA 1430 42.24 MSCSNLTMWVSSKPTVSDASSLSFRSFLSPFQLPSQNSSPARSWSVSPIHCGLRELRDRIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSEALVEVLYNINEQLQTEDVDVPLTKVRPVKKVALVVVTGDRGLCGGFNNTIIKKAEARISELKALGLDYTVISVGKKGNSYFLRRPYIPVDKFLEGGTLPTAKEAQAIADDVFSLFVSEEVDKVELLYTKFVSLIKSDPVIHTLLPLSPKGEICDINGVCVDAAEDEFFRLTTKEGKLTVERDSVRTSTSDFSPILEFEQDPVQILDALLPLYLNSQILRALQESLASELAARMSAMSNATDNASELKRTLSIVYNRQRQAKITGEILEIVAGANALT 373
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 53279485 53280914 - XM_039038188.1 Bhi08g01833 42166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi08g01833 373 TIGRFAM ATPsyn_F1gamma: ATP synthase F1, gamma subunit 52 372 IPR000131 GO:0015986|GO:0045261|GO:0046933
Bhi08g01833 373 SUPERFAMILY ATP synthase (F1-ATPase), gamma subunit 52 372 IPR035968 GO:0015986|GO:0045261|GO:0046933
Bhi08g01833 373 Gene3D ATP synthase, gamma subunit, helix hairpin domain 52 119 - -
Bhi08g01833 373 Gene3D - 120 243 - -
Bhi08g01833 373 Gene3D ATP synthase, gamma subunit, helix hairpin domain 269 372 - -
Bhi08g01833 373 PRINTS ATP synthase gamma subunit signature 124 143 IPR000131 GO:0015986|GO:0045261|GO:0046933
Bhi08g01833 373 PRINTS ATP synthase gamma subunit signature 217 234 IPR000131 GO:0015986|GO:0045261|GO:0046933
Bhi08g01833 373 PRINTS ATP synthase gamma subunit signature 319 338 IPR000131 GO:0015986|GO:0045261|GO:0046933
Bhi08g01833 373 PRINTS ATP synthase gamma subunit signature 350 371 IPR000131 GO:0015986|GO:0045261|GO:0046933
Bhi08g01833 373 Pfam ATP synthase 53 372 IPR000131 GO:0015986|GO:0045261|GO:0046933
Bhi08g01833 373 Hamap ATP synthase gamma chain [atpG]. 50 372 IPR000131 GO:0015986|GO:0045261|GO:0046933
Bhi08g01833 373 ProSitePatterns ATP synthase gamma subunit signature. 358 371 IPR023632 -
Bhi08g01833 373 CDD F1-ATPase_gamma 53 369 IPR000131 GO:0015986|GO:0045261|GO:0046933
Bhi08g01833 373 PANTHER ATP SYNTHASE GAMMA CHAIN 1, CHLOROPLASTIC 1 372 - -
Bhi08g01833 373 PANTHER ATP SYNTHASE GAMMA CHAIN 1 372 IPR000131 GO:0015986|GO:0045261|GO:0046933
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bhi03g00577 Bhi08g01833 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi08g01087 Bhi-Chr8:35078387 Bhi08g01833 Bhi-Chr8:53279485 1.11E-28 transposed
Bhi11g00613 Bhi-Chr11:14325562 Bhi08g01833 Bhi-Chr8:53279485 1.63E-151 transposed
Bhi03g00577 Bhi-Chr3:11372082 Bhi08g01833 Bhi-Chr8:53279485 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi08g01833 K02115 - csv:101214408 682.174