Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi08g01868 TACCAGAACCAGTCATCCTCCTCCTCCTCTTACAGAGTTTCACAAGTTTAACGAAAAGGATCAACCAAAATTCGACTAATCGGTGCAAAGAAATACTTAAGCAATGAAAAATCTCTTATCATTCCTCTTTTTCTTCATACTCATACCTCTGTTTTCCCGAAAGTCCATTGCAGACGATAGTCTAAGAAAACGCCAATCCATTAACGACACCCAAGTAATTATTTCAGCCTCCCAAAAGTTTGAATTGGGGTTCTTCAATGAACCCAAAGCCTCCAATTTGAAGTATTTAGGAATATGGTACAAGGGCATTCCCGACGTCGTCGTCTGGGTGGCGAACAGAGACAACCCAATTGTAAACTCCTCTGCTTCTTTAACTTTCAGTGAAGATGGAAACTTGGTTCTCATCAATCAAACAGGTTCCCATCTTTGGTCTTCAAACTCCACAAGATCAATTCGAAATCCCGTCGGTCAACTGCTTGATACTGGCAATTTGGTGTTGAGAGATTCAAATTCGAAGTCTAAATATTATGAATGGCAGAGTTTTGATTATCCCTCCGATACTCTGTTACCGGGTATGAAACTCGGGTGGGACTCTAGAACAGGTCTTAACCGAAAATTAACATCTTGGACAAGTCCAGACAATCCATCATTAGGAGAATTCAGTTTTAGCATCAATACAAATGGGCTTCCTCAATTCCTTGTTAGTAAAGGAAACAAGACTATGTACAGAGGTTGGCCTTGGTTTGATCATGATTTTGGACAGGGTTATGGTAATGGGTTTGATTACAATCTCGTCTTTAATACTTCCATGGAGATATCATTTTCATATCGTTATTCAGAAAACAGCCGTACAAGAATTGTGATGGATTCAAGTGGGTCGATATATCGATATGTGTGGAGCGATGTAGAAGAAGAATGGCACAAAGAATTCACATTTGATGGAGCTGGTTGCAACGACTATGACTTGTGTGGAAATTTTGGTATTTGTAGCTCTGTAGTAACAGCAAGTTGCGATTGTTTATATGGGTTTAAACCAATCTCAACACAAAACTTTTCAAATGGGTGCATCAGAAAAGATCCAGAGATCTGCAAAGCTGGAGATGGGTTTAAAGTGATGAGTAATGTGAAATGGCCTGATTCTACAGGGGATTTGGTGAAAATGAAACTGGATATTCAAGATTGTAAAGCAGAATGCTTGAAGAATTGCTCTTGTTTAGCATATGGAACAGTGGAAATTCCTAAAATTGGCAATGTCTGTGTCAATTGGTTTCATAAATTGATTGATGTTAGATATGTTCGTGAGGTTGGGTCTGGAGATGATCTCTACGTGAGAGTTGCCGCTTCAGAATTAGAATGGGATGATGAAAAGCGTAGTGTTGCTGTGGTTGTGGTTGTGCCGATCGTATCAGTGATAATCTTTTTGGCTTTAGTTAGCGGCTGCTGTCTTATCAGGAGAAGAGCTAGCGGTAATGATCTAGTTGTTATAGAGCTCCCAATTCAAGAAAATAACCTTGAGATGCCTATTACTGTTCTTGAAGCTGCTACGGAAAATTTCTCTATTTCTAACAAGATAGGAGAGGGTGGTTTTGGACTTGTTTACAAGGGAAAGCTTCCAAGTGGGCAAGAAATTGCTGTAAAAAAACTAGCAGAAAGATCAGGTCAAGGGTTGCAGGAGTTCAAAAATGAAGTCATTTTCATTTCTCAACTTCAACATCGAAATCTTGTCAAGCTTCTTGGTTTTTGCATCCACGAGGAAGATATATTACTAATCTATGAGTACTTGCCAAACAAAAGTTTGGACTGCTTCCTTTTTGATGACCAAAGGCGTTCTATACTCAATTGGTCAATGAGAATTGATATCATAATTGGCATAACTCGAGGACTTCTATATCTCCATCAAGATTCGAGACTTCGAATAATACATAGAGATCTTAAAGCAGCCAATATTTTGTTGGATAGTGGAATGAAACCGAAAATTTCAGACTTTGGCATGGCACGCATATTTGGCGAAGATCAAACAGAAACAAAAACAAAGAGGGTTGTTGGAACTTATGGTTATATGCCTCCAGAATATGTAATAGATGGTTACTTTTCAGTGAAGTCTGATGTTTTTAGCTTTGGAGTCGTGGTTTTAGAAATAATCAGTGGCAAGAAGAACAAAGGTTTTCTTCATCCAGAGCATCAACTAAATCTTCTTGGACACGCATGGAAACTTTGGAACGAAGGAAGAGCATTGGAATTAATCGATGTTATGTTAGAGGATCAATTCGATAAATATGAAGCTTTGAGATATATAAATATTGGGTTGTTATGTGTTCAAAGACGTCCAGAAGAAAGGCCATCGATGTCAACTGTGTTTTCCATGTTAGAGAATGAAAAGATGCAATTAAGACTTCCTCAACGGCCTGGATTCTATGAGGAAAGGTTTATAGTATCCGATATTAATTCATCATCAGGCGATCAACAAACATCCTCGTCCAATAATAATGTTACAGTTACATTGCTACATGGTCGTTAA 2518 38.44 MKNLLSFLFFFILIPLFSRKSIADDSLRKRQSINDTQVIISASQKFELGFFNEPKASNLKYLGIWYKGIPDVVVWVANRDNPIVNSSASLTFSEDGNLVLINQTGSHLWSSNSTRSIRNPVGQLLDTGNLVLRDSNSKSKYYEWQSFDYPSDTLLPGMKLGWDSRTGLNRKLTSWTSPDNPSLGEFSFSINTNGLPQFLVSKGNKTMYRGWPWFDHDFGQGYGNGFDYNLVFNTSMEISFSYRYSENSRTRIVMDSSGSIYRYVWSDVEEEWHKEFTFDGAGCNDYDLCGNFGICSSVVTASCDCLYGFKPISTQNFSNGCIRKDPEICKAGDGFKVMSNVKWPDSTGDLVKMKLDIQDCKAECLKNCSCLAYGTVEIPKIGNVCVNWFHKLIDVRYVREVGSGDDLYVRVAASELEWDDEKRSVAVVVVVPIVSVIIFLALVSGCCLIRRRASGNDLVVIELPIQENNLEMPITVLEAATENFSISNKIGEGGFGLVYKGKLPSGQEIAVKKLAERSGQGLQEFKNEVIFISQLQHRNLVKLLGFCIHEEDILLIYEYLPNKSLDCFLFDDQRRSILNWSMRIDIIIGITRGLLYLHQDSRLRIIHRDLKAANILLDSGMKPKISDFGMARIFGEDQTETKTKRVVGTYGYMPPEYVIDGYFSVKSDVFSFGVVVLEIISGKKNKGFLHPEHQLNLLGHAWKLWNEGRALELIDVMLEDQFDKYEALRYINIGLLCVQRRPEERPSMSTVFSMLENEKMQLRLPQRPGFYEERFIVSDINSSSGDQQTSSSNNNVTVTLLHGR 804
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 54027533 54031065 - XM_039040035.1 Bhi08g01868 42201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi08g01868 804 Pfam S-locus glycoprotein domain 226 311 IPR000858 GO:0048544
Bhi08g01868 804 Pfam Protein tyrosine and serine/threonine kinase 486 754 IPR001245 GO:0004672|GO:0006468
Bhi08g01868 804 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 16 802 - -
Bhi08g01868 804 ProSitePatterns Protein kinases ATP-binding region signature. 490 513 IPR017441 GO:0005524
Bhi08g01868 804 Gene3D - 19 147 IPR036426 -
Bhi08g01868 804 ProSiteProfiles PAN/Apple domain profile. 329 412 IPR003609 -
Bhi08g01868 804 ProSiteProfiles Protein kinase domain profile. 484 760 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi08g01868 804 ProSiteProfiles Bulb-type lectin domain profile. 24 145 IPR001480 -
Bhi08g01868 804 CDD B_lectin 30 150 IPR001480 -
Bhi08g01868 804 SMART ntp_6 330 411 IPR003609 -
Bhi08g01868 804 SMART serkin_6 484 755 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi08g01868 804 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 16 802 - -
Bhi08g01868 804 Gene3D Phosphorylase Kinase; domain 1 449 559 - -
Bhi08g01868 804 SMART blect_4 30 150 IPR001480 -
Bhi08g01868 804 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 181 IPR036426 -
Bhi08g01868 804 PIRSF SRK 1 804 IPR024171 GO:0004674
Bhi08g01868 804 Pfam D-mannose binding lectin 73 175 IPR001480 -
Bhi08g01868 804 Gene3D Transferase(Phosphotransferase) domain 1 560 767 - -
Bhi08g01868 804 ProSitePatterns Serine/Threonine protein kinases active-site signature. 605 617 IPR008271 GO:0004672|GO:0006468
Bhi08g01868 804 Pfam PAN-like domain 329 395 IPR003609 -
Bhi08g01868 804 MobiDBLite consensus disorder prediction 782 804 - -
Bhi08g01868 804 CDD STKc_IRAK 490 757 - -
Bhi08g01868 804 CDD PAN_AP_plant 330 412 - -
Bhi08g01868 804 SUPERFAMILY Protein kinase-like (PK-like) 471 781 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi08g01865 Bhi-Chr8:53870235 Bhi08g01868 Bhi-Chr8:54027533 7.54E-39 dispersed
Bhi08g01868 Bhi-Chr8:54027533 Bhi08g01870 Bhi-Chr8:54040904 0 dispersed
Bhi08g01868 Bhi-Chr8:54027533 Bhi08g01869 Bhi-Chr8:54040904 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88003 PF07714 PK_Tyr_Ser-Thr 5.10E-48 CL0016 Bhi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi08g01868 - - csv:101215224 1372.45