Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi08g01870 AAAGAGCTCCATCAACAATGAACCAAGAGACTTAAAGGGAAAAAATGATATCCAACTTCAGGCAAAACCCCTTTTCTTTGCTCTGTTTTTGGACACTGATACCTCTGTTTCTCAAACAGTCAATAGCAGGCGACGACACCTTAAAAGCAGGGCAGTCCATTAACGACACCCAATTAATTGTTTCAGCCACCCAGATGTTTGAATTGGGGTTCTTCTCTGAACCCAAATCCTCAAATTTCAAGTATTTAGGAATATGGTATAAGGGTATTCCTGACGTGGTTGTTTGGGTGGCAAACAGAGATAACCCAATTATAAATTCCTCTGCCACTTTAAAGATCAATGGAGATGGAAACTTTGTTCTCCTAAATCAAACAGGTGAGGATTTTTGGTGTTCAAATGCTTCAAGATCAGTTAAAAACCCTATTGCCCAGCTGCTGGATACAGGTAATTTGGTGTTAAGAGATTCAAATTCAGGGTCTGAAAATTACGTGTGGCAGAGCTTTGATTACCCTTTTGATACTCTGTTACCGGGGATGAAACTCGGGTGGGACTTGAAAACAGGTTTAAACCGAAAGTTAATATCAAGGAGAAATCAAATGGATCTATCTTCAGGAAAATTCAGCTATGGAATTAACACAGATGGGGTTCCTCAACTTATGGTTAGTGAAGGAAACAAGACAATGTTTAGAGGGTGGCCATGGTTTGGGAATGGTTTTAGCCGGAGTCGGTCACAAGAAGCAAATTTCATGTACAATACTTCATTTGAGATATCATTTTCATATAATAATGGTCCAAATAATGAGCCTTCAAGAGTTGTATTGGATTCAAGTGGGTCCGTTGTACACTATATGTGGAGCAAAGGGGACCAAAATTGCCACATATCTTACACGTTTGAAGGATCTGGGTGCAACAGCTATGAATTATGTGGGAATTTTGGTCTTTGTAGCTCTGTTTTAGTAGCTAGTTGTGGTTGTTTAGATGGGTTTGAACAAAAATCAACACAAAGCTTTTCAGATGGGTGTGTGAGAAAGCATCCAGAAATCTGCAGAGCAGGAGAGGGATTTAAAAAGATAAGTAATGTGAAATGGCCAGATTCCAGTGGGGAGTTTGTCAAAATCAAATTGGGTACTCAAAATTGTGAGAAAGAATGTTTGAATGACTGCTCTTGCTTGGCTTATGGTGCATTGGAAATTCCTAAGATTGGACCTTCTTGTGTCACCTGGTTTGGGAAATTGATTGATATTAGATTTGTTCGTGATGCTGGAACTGGAGAAGATCTCTTTGTGAGAGTGGCGGCTTCAGAATTAGAATCAAGTCAGAAGAAGAGTGGAGTTGCGGTGGTTGTGGCTATGGTAATCATATCCATACTAATCTTCTTGGCTTTAATCAGCTGGCTTATCATCAGGAATGTAAGAAGAAAGGCAAGAGAAGACCAAGGAGCTGTGATGATTGAAGCTCTAATTCAAGAGAATGAACTTGAGATGCCAATTGCTTTAATAGAAGCAGCAACAGATCATTTTTCTGTTTCCAATAAGATAGGAGAAGGAGGTTTTGGACCAGTTTATAAGGGCAAACTTCCATCTGGCCAAGAAATTGCTGTAAAAAAACTAGCAGAAAGCTCTCGCCAAGGATTACAGGAGTTTAAAAATGAGATCCTTTTCATTTCCCAGCTTCAACATCGAAATCTTGTCAAACTTCTTGGTTTTTGCATCCACCAGGAAGAAACGTTACTTATTTATGAATACATGCCAAACAAAAGCTTGGACTACTTCCTTTTCGATGACCGAAGACGTTCGTTACTCAATTGGTCAATGAGAATTGATATCATAATTGGTATAGCTCGAGGGCTTCTTTATCTCCATCGAGATTCAAGACTTCGAATAATTCATAGAGATCTTAAAGCTGCCAATATTTTATTAGATAGTGGAATGGAGCCAAAAATTTCAGATTTTGGCATTGCACGCATGTTTGGTGAAGATCAAACAGAAACAAAAACAAAAAGGGTTGTTGGGACATTTGGTTATATGTCTCCAGAGTATGTAATAGATGGTCGCTTTTCATTCAAATCTGATGTTTTCAGCTTTGGAGTTATGCTTTTGGAAATAGTTAGTGGCAAAAGGAATAGGTACTTTTTTCACCTCGAACATCAACAACTAAATCTTCTTGGACATGTATGGAAACTTTGGAATGAAGGAAGGGCACTGGAATTAATTGATGAGACGTTGAGAGATCAATTTCAAGAATATGAAGCACTTAAATACATAAATATTGGACTTTTATGTATTCAAGGACGTCCAGAAAAAAGACCAACTATGTCATCTGTGCTTTCCATGTTAGAAAATAATAACATGGAATTGATATCTCCAGAACGACCAGGATTCTATGAAGAAAGGTTTGAATGGCTTGGTGTTGATCATTCACCATCACTGGGTGATAAATTAACTTCTAGTTCAAACAATGTTGTTACGATTACTTTATTTGATGGTCGTTAAAGTACTTAATTATGAACACATTGATCTTAGAAAACTTCTGTTCTGGTTTAGTAGATCAATTGTTATTGGTTTCCTTTGTAAA 2574 37.8 MISNFRQNPFSLLCFWTLIPLFLKQSIAGDDTLKAGQSINDTQLIVSATQMFELGFFSEPKSSNFKYLGIWYKGIPDVVVWVANRDNPIINSSATLKINGDGNFVLLNQTGEDFWCSNASRSVKNPIAQLLDTGNLVLRDSNSGSENYVWQSFDYPFDTLLPGMKLGWDLKTGLNRKLISRRNQMDLSSGKFSYGINTDGVPQLMVSEGNKTMFRGWPWFGNGFSRSRSQEANFMYNTSFEISFSYNNGPNNEPSRVVLDSSGSVVHYMWSKGDQNCHISYTFEGSGCNSYELCGNFGLCSSVLVASCGCLDGFEQKSTQSFSDGCVRKHPEICRAGEGFKKISNVKWPDSSGEFVKIKLGTQNCEKECLNDCSCLAYGALEIPKIGPSCVTWFGKLIDIRFVRDAGTGEDLFVRVAASELESSQKKSGVAVVVAMVIISILIFLALISWLIIRNVRRKAREDQGAVMIEALIQENELEMPIALIEAATDHFSVSNKIGEGGFGPVYKGKLPSGQEIAVKKLAESSRQGLQEFKNEILFISQLQHRNLVKLLGFCIHQEETLLIYEYMPNKSLDYFLFDDRRRSLLNWSMRIDIIIGIARGLLYLHRDSRLRIIHRDLKAANILLDSGMEPKISDFGIARMFGEDQTETKTKRVVGTFGYMSPEYVIDGRFSFKSDVFSFGVMLLEIVSGKRNRYFFHLEHQQLNLLGHVWKLWNEGRALELIDETLRDQFQEYEALKYINIGLLCIQGRPEKRPTMSSVLSMLENNNMELISPERPGFYEERFEWLGVDHSPSLGDKLTSSSNNVVTITLFDGR 815
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 54040904 54044055 - XM_039039110.1 Bhi08g01870 42203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi08g01870 815 Pfam PAN-like domain 334 400 IPR003609 -
Bhi08g01870 815 CDD B_lectin 37 156 IPR001480 -
Bhi08g01870 815 SMART ntp_6 335 416 IPR003609 -
Bhi08g01870 815 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 23 812 - -
Bhi08g01870 815 CDD PAN_AP_plant 335 417 - -
Bhi08g01870 815 SUPERFAMILY Protein kinase-like (PK-like) 481 787 IPR011009 -
Bhi08g01870 815 ProSitePatterns Serine/Threonine protein kinases active-site signature. 613 625 IPR008271 GO:0004672|GO:0006468
Bhi08g01870 815 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 23 812 - -
Bhi08g01870 815 ProSiteProfiles Protein kinase domain profile. 492 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi08g01870 815 PIRSF SRK 5 815 IPR024171 GO:0004674
Bhi08g01870 815 ProSiteProfiles PAN/Apple domain profile. 334 417 IPR003609 -
Bhi08g01870 815 ProSiteProfiles Bulb-type lectin domain profile. 30 151 IPR001480 -
Bhi08g01870 815 Pfam Protein tyrosine and serine/threonine kinase 494 764 IPR001245 GO:0004672|GO:0006468
Bhi08g01870 815 SMART blect_4 36 156 IPR001480 -
Bhi08g01870 815 SUPERFAMILY alpha-D-mannose-specific plant lectins 79 180 IPR036426 -
Bhi08g01870 815 Pfam S-locus glycoprotein domain 217 317 IPR000858 GO:0048544
Bhi08g01870 815 CDD STKc_IRAK 498 766 - -
Bhi08g01870 815 Gene3D Transferase(Phosphotransferase) domain 1 568 775 - -
Bhi08g01870 815 Gene3D Phosphorylase Kinase; domain 1 453 567 - -
Bhi08g01870 815 Gene3D - 25 153 IPR036426 -
Bhi08g01870 815 SMART serkin_6 492 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi08g01870 815 Pfam D-mannose binding lectin 79 182 IPR001480 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi08g01868 Bhi-Chr8:54027533 Bhi08g01870 Bhi-Chr8:54040904 0 dispersed
Bhi08g01870 Bhi-Chr8:54040904 Bhi08g01872 Bhi-Chr8:54041117 0 dispersed
Bhi08g01869 Bhi-Chr8:54040904 Bhi08g01870 Bhi-Chr8:54040904 0 tandem
Bhi08g01870 Bhi-Chr8:54040904 Bhi08g01871 Bhi-Chr8:54040904 6.29E-107 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88005 PF07714 PK_Tyr_Ser-Thr 3.00E-51 CL0016 Bhi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi08g01870 - - csv:105434442 1321.99