Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bhi08g01872 | AAAGAGCTCCATCAACAATGAACCAAGAGACTTAAAGGGAAAAAATGATATCCAACTTCAGGCAAAACCCCTTTTCTTTGCTCTGTTTTTGGACACTGATACCTCTGTTTCTCAAACAGTCAATAGCAGGCGACGACACCTTAAAAGCAGGGCAGTCCATTAACGACACCCAATTAATTGTTTCAGCCACCCAGATGTTTGAATTGGGGTTCTTCTCTGAACCCAAATCCTCAAATTTCAAGTATTTAGGAATATGGTATAAGGGTATTCCTGACGTGGTTGTTTGGGTGGCAAACAGAGATAACCCAATTATAAATTCCTCTGCCACTTTAAAGATCAATGGAGATGGAAACTTTGTTCTCCTAAATCAAACAGGTGAGGATTTTTGGTGTTCAAATGCTTCAAGATCAGTTAAAAACCCTATTGCCCAGCTGCTGGATACAGGTAATTTGGTGTTAAGAGATTCAAATTCAGGGTCTGAAAATTACGTGTGGCAGAGCTTTGATTACCCTTTTGATACTCTGTTACCGGGGATGAAACTCGGGTGGGACTTGAAAACAGGTTTAAACCGAAAGTTAATATCAAGGAGAAATCAAATGGATCTATCTTCAGGAAAATTCAGCTATGGAATTAACACAGATGGGGTTCCTCAACTTATGGTTAGTGAAGGAAACAAGACAATGTTTAGAGGGTGGCCATGGTTTGGGAATGGTTTTAGCCGGAGTCGGTCACAAGAAGCAAATTTCATGTACAATACTTCATTTGAGATATCATTTTCATATAATAATGGTCCAAATAATGAGCCTTCAAGAGTTGTATTGGATTCAAGTGGGTCCGTTGTACACTATATGTGGAGCAAAGGGGACCAAAATTGCCACATATCTTACACGTTTGAAGGATCTGGGTGCAACAGCTATGAATTATGTGGGAATTTTGGTCTTTGTAGCTCTGTTTTAGTAGCTAGTTGTGGTTGTTTAGATGGGTTTGAACAAAAATCAACACAAAGCTTTTCAGATGGGTGTGTGAGAAAGCATCCAGAAATCTGCAGAGCAGGAGAGGGATTTAAAAAGATAAGTAATGTGAAATGGCCAGATTCCAGTGGGGAGTTTGTCAAAATCAAATTGGGTACTCAAAATTGTGAGAAAGAATGTTTGAATGACTGCTCTTGCTTGGCTTATGGTGCATTGGAAATTCCTAAGATTGGACCTTCTTGTGTCACCTGGTTTGGGAAATTGATTGATATTAGATTTGTTCGTGATGCTGGAACTGGAGAAGATCTCTTTGTGAGAGTGGCGGCTTCAGAATTAGAATCAAGTCAGAAGAAGAGTGGAGTTGCGGTGGTTGTGGCTATGGTAATCATATCCATACTAATCTTCTTGGCTTTAATCAGCTGGCTTATCATCAGGAATGTAAGAAGAAAGGCAAGAGAAGACCAAGGAGCTGTGATGATTGAAGCTCTAATTCAAGAGAATGAACTTGAGATGCCAATTGCTTTAATAGAAGCAGCAACAGATCATTTTTCTGTTTCCAATAAGATAGGAGAAGGAGGTTTTGGACCAGTTTATAAGGGCAAACTTCCATCTGGCCAAGAAATTGCTGTAAAAAAACTAGCAGAAAGCTCTCGCCAAGGATTACAGGAGTTTAAAAATGAGATCCTTTTCATTTCCCAGCTTCAACATCGAAATCTTGTCAAACTTCTTGGTTTTTGCATCCACCAGGAAGAAACGTTACTTATTTATGAATACATGCCAAACAAAAGCTTGGACTACTTCCTTTTCGATGACCGAAGACGTTCGTTACTCAATTGGTCAATGAGAATTGATATCATAATTGGTATAGCTCGAGGGCTTCTTTATCTCCATCGAGATTCAAGACTTCGAATAATTCATAGAGATCTTAAAGCTGCCAATATTTTATTAGATAGTGGAATGGAGCCAAAAATTTCAGATTTTGGCATTGCACGCATGTTTGGTGAAGATCAAACAGAAACAAAAACAAAAAGGGTTGTTGGGACATTTGGTTATATGTCTCCAGAGTATGTAATAGATGGTCGCTTTTCATTCAAATCTGATGTTTTCAGCTTTGGAGTTATGCTTTTGGAAATAGTTAGTGGCAAAAGGAATAGGTATGGAAACTTTGGAATGAAGGAAGGGCACTGGAATTAATTGATGAGACGTTGAGAGATCAATTTCAAGAATATGAAGCACTTAAATACATAAATATTGGACTTTTATGTATTCAAGGACGTCCAGAAAAAAGACCAACTATGTCATCTGTGCTTTCCATGTTAGAAAATAATAACATGGAATTGATAT | 2315 | 38.27 | MISNFRQNPFSLLCFWTLIPLFLKQSIAGDDTLKAGQSINDTQLIVSATQMFELGFFSEPKSSNFKYLGIWYKGIPDVVVWVANRDNPIINSSATLKINGDGNFVLLNQTGEDFWCSNASRSVKNPIAQLLDTGNLVLRDSNSGSENYVWQSFDYPFDTLLPGMKLGWDLKTGLNRKLISRRNQMDLSSGKFSYGINTDGVPQLMVSEGNKTMFRGWPWFGNGFSRSRSQEANFMYNTSFEISFSYNNGPNNEPSRVVLDSSGSVVHYMWSKGDQNCHISYTFEGSGCNSYELCGNFGLCSSVLVASCGCLDGFEQKSTQSFSDGCVRKHPEICRAGEGFKKISNVKWPDSSGEFVKIKLGTQNCEKECLNDCSCLAYGALEIPKIGPSCVTWFGKLIDIRFVRDAGTGEDLFVRVAASELESSQKKSGVAVVVAMVIISILIFLALISWLIIRNVRRKAREDQGAVMIEALIQENELEMPIALIEAATDHFSVSNKIGEGGFGPVYKGKLPSGQEIAVKKLAESSRQGLQEFKNEILFISQLQHRNLVKLLGFCIHQEETLLIYEYMPNKSLDYFLFDDRRRSLLNWSMRIDIIIGIARGLLYLHRDSRLRIIHRDLKAANILLDSGMEPKISDFGIARMFGEDQTETKTKRVVGTFGYMSPEYVIDGRFSFKSDVFSFGVMLLEIVSGKRNRYGNFGMKEGHWN | 706 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 54041117 | 54044055 | - | XM_039039112.1 | Bhi08g01872 | 42205 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bhi08g01872 | 706 | CDD | B_lectin | 37 | 156 | IPR001480 | - | |
| Bhi08g01872 | 706 | Gene3D | Transferase(Phosphotransferase) domain 1 | 568 | 704 | - | - | |
| Bhi08g01872 | 706 | SMART | ntp_6 | 335 | 416 | IPR003609 | - | |
| Bhi08g01872 | 706 | Pfam | D-mannose binding lectin | 79 | 182 | IPR001480 | - | |
| Bhi08g01872 | 706 | SMART | serkin_6 | 492 | 706 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Bhi08g01872 | 706 | SUPERFAMILY | Protein kinase-like (PK-like) | 479 | 696 | IPR011009 | - | |
| Bhi08g01872 | 706 | CDD | PAN_AP_plant | 335 | 417 | - | - | |
| Bhi08g01872 | 706 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 613 | 625 | IPR008271 | GO:0004672|GO:0006468 | |
| Bhi08g01872 | 706 | PANTHER | RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 | 23 | 694 | - | - | |
| Bhi08g01872 | 706 | Pfam | S-locus glycoprotein domain | 216 | 317 | IPR000858 | GO:0048544 | |
| Bhi08g01872 | 706 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 79 | 180 | IPR036426 | - | |
| Bhi08g01872 | 706 | ProSiteProfiles | PAN/Apple domain profile. | 334 | 417 | IPR003609 | - | |
| Bhi08g01872 | 706 | ProSiteProfiles | Bulb-type lectin domain profile. | 30 | 151 | IPR001480 | - | |
| Bhi08g01872 | 706 | PIRSF | SRK | 5 | 702 | IPR024171 | GO:0004674 | |
| Bhi08g01872 | 706 | SMART | blect_4 | 36 | 156 | IPR001480 | - | |
| Bhi08g01872 | 706 | Gene3D | Phosphorylase Kinase; domain 1 | 453 | 567 | - | - | |
| Bhi08g01872 | 706 | ProSiteProfiles | Protein kinase domain profile. | 492 | 706 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Bhi08g01872 | 706 | Gene3D | - | 25 | 153 | IPR036426 | - | |
| Bhi08g01872 | 706 | Pfam | Protein tyrosine and serine/threonine kinase | 494 | 695 | IPR001245 | GO:0004672|GO:0006468 | |
| Bhi08g01872 | 706 | PANTHER | S-LOCUS LECTIN KINASE FAMILY PROTEIN | 23 | 694 | - | - | |
| Bhi08g01872 | 706 | Pfam | PAN-like domain | 334 | 400 | IPR003609 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bhi08g01869 | Bhi-Chr8:54040904 | Bhi08g01872 | Bhi-Chr8:54041117 | 0 | dispersed | |
| Bhi08g01870 | Bhi-Chr8:54040904 | Bhi08g01872 | Bhi-Chr8:54041117 | 0 | dispersed | |
| Bhi08g01872 | Bhi-Chr8:54041117 | Bhi08g01874 | Bhi-Chr8:54045591 | 0 | dispersed | |
| Bhi08g01872 | Bhi-Chr8:54041117 | Bhi08g01873 | Bhi-Chr8:54041369 | 0 | tandem |
Transcription factors information
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 88007 | PF07714 | PK_Tyr_Ser-Thr | 2.10E-48 | CL0016 | Bhi | PK |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bhi08g01872 | - | - | csv:105434442 | 1113.6 |