Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi08g01874 TCTTTTCTTTATCATTATATGTCTTTGGCTGCATCGATTATCAATCTTCACGGTGAGTTGCTCCACCAATCAAGCCCATGATGCAGAAAATGACATCCATCTTCAGGCTCAATCATTTGTCTTTGCTCTGTTTTATACCTCTGTTTCTTCAACACTCAATCGCAGTCGACATCTTAAAAGCAGGGCAATCCATTAACGACACCCAAGTAATTGTTTCAGCCGCTGAAAAGTTTGAATTGGGATTCTTCGCTCAACCCAAGTCCTCCAATTTCAAGTATTTAGGAATATGGTACGAAGGCCTTCCCGACTATGTCGTTTGGGTGGCAAACAGAGATAACCCAATTCTAAACTCCTCTGCCACTCTAAAATTCAATCCCGATGGAAACTTAATTCTCGTCAACCAAACAGATCAAGTTTTTTGGTCTTCAAATTCAACAAGATCACTTCAAGATCCGATCGCTCAACTCCTAGATACAGGTAATTTCATGCTGAGAGATTCAAATTCAGGATCTGAAGATTACGTGTGGCAGAGTTTTGATTATCCCTTCGATACTCTAATACCGGGAATGAAACTGGGGTGGGACTCCAAAACAGGGCTTAATCGGAAGTTAACATCAAGGAAAACTCAAAACAATCCATCCTCTGGTGAACTCAGTTATGGAGTCAACACAGATGGGCTTCCTCAACTTGTGGTTCGTAAGGGAAACAAGACGTTGTTTAGGGGAGGGCCATGGTTTGGCAATGGTTTTAGCCGAAGTCGATCAAAGGGAGCAAATTTCATCTATAATGCTTCATTTGAGATATCATATTCATTAAAGGATTCAAAAGATGGCCCTTCGAGAGCTGTGTTGGATCCAAGTGGATCCGTTATATACTATGTGTGGGGCGGAGGGGACAAACTATGGGACATAGCATACACGTTTGACGAATCTGGTTGCAACGACTACAAATTATGTGGAAATTTTGGTCTTTGTAGCTCTGTTTTAGTAGCAAGCTGTGGTTGTTTAGATGGGTTTGAACAAAACTCAGCACAAAATTTTTCAGATGAGTGTGTGAGAAAGGATGAAAAAATTTGCAAAGAAGGAGAAGGATTTAGAAAGATAAGTGATGTGAAATTGCCAGATTCCACAAGGAACTTAGCGAAATTGAAAGTGGGTATTCAAAATTGTGAAACAGAGTGCTTGAATGATTGTTTGTGCTTGGCTTATGGCATGCTGCAACTTCCTAATATTGGGCCTGCCTGTGTCACCTGGTTTGACAAATTGATTGATATTAGACGTGTTCGTGATGCTGGAACTGGGGATGATCTGTTTGTGAGAGTGGCCGCTTCAGAATTAGAATGGAGTGAAAGGAAGAGTATAATAGTTCCGGTGGTTGTGCCAACCGTATCAGCGATAATCTTCTTGGCTTTAATCAGCATTTTTATCGTTAGGAATGTAAGAAGAAGAGCTAAAGACAATGGAGTTGCAATCACTGAGGATTTAATTCATGAGAATGAACTTGAGATGTCGATTGCGATTATTGAAGCTGCGACGAACAATTTCTCATTGTCTAATAAGATTGGAGAAGGAGGTTTCGGACCTGTTTACAAGGGAAAACTTCCATCTGGACAAGAAATTGCGGTAAAGAAACTAGCAGAAAGATCTCGTCAAGGGTTGGAAGAGTTTAAAAATGAGGTCCTTTTTATTTCCCAACTTCAACATCGAAATCTTGTCAAACTTCTTGGTTTCTGCATTCACAAGGAAGAAACATTACTCATTTATGAATACATGCCAAACAAAAGTTTGGACTACTTCCTTTTTGATGACGGAAGGCGTTCTTTACTCCATTGGCAAATGAGAATTGATATCATAATTGGTATAGCTCGAGGACTTCTTTATCTTCATCGAGATTCAAGACTTCGAATAATACACAGAGATCTTAAAGCTGCCAATATTTTATTGGATAGTGAAATGAAGCCAAAAATTTCAGACTTTGGTATTGCACGAATGTTTGGTGAATATCAAATGGAAACAAAAACAAACAGAGTTATTGGAACCTATGGTTATATGTCTCCAGAATATGCAATGGAAGGTTGCTTTTCCTTCAAATCCGATGTTTACAGCTTTGGTGTTATGCTTTTAGAGATAGTTAGCGGCAAGAGGAACCAAGGCTTTTTTCACTCTGAACATCGTCAACTGAATCTTCTTGGACATGCATGGAAACTTTGGAACGAAGGAAAGACTTTGGAATTAATAGATGAAGTGTTGGGTGATCAATTCCAAGAATGTGAAGCACTAAAATACATAAATATTGGACTTCTATGTGTTCAAGCACGTCCAGAAGAAAGACCAATTATGTCATCTGTACTTTCAATGTTAGAAAATGATAACATGTCGTTGATTCATCCGAAAGGACCCCGGTTCTATGGGGAAAGATTTGCATTGTCTGATATTGACTCGTCGTTTTCTACTACGAATAATGTTACTATTACATTGTTAGACGATGGTCGCTAATACTAACAACACTGCAATTATGTAATTCTACATTATTAATCAAATTTAGTGGAAAAAAGTATAGAATATGTATTGA 2571 38.62 MMQKMTSIFRLNHLSLLCFIPLFLQHSIAVDILKAGQSINDTQVIVSAAEKFELGFFAQPKSSNFKYLGIWYEGLPDYVVWVANRDNPILNSSATLKFNPDGNLILVNQTDQVFWSSNSTRSLQDPIAQLLDTGNFMLRDSNSGSEDYVWQSFDYPFDTLIPGMKLGWDSKTGLNRKLTSRKTQNNPSSGELSYGVNTDGLPQLVVRKGNKTLFRGGPWFGNGFSRSRSKGANFIYNASFEISYSLKDSKDGPSRAVLDPSGSVIYYVWGGGDKLWDIAYTFDESGCNDYKLCGNFGLCSSVLVASCGCLDGFEQNSAQNFSDECVRKDEKICKEGEGFRKISDVKLPDSTRNLAKLKVGIQNCETECLNDCLCLAYGMLQLPNIGPACVTWFDKLIDIRRVRDAGTGDDLFVRVAASELEWSERKSIIVPVVVPTVSAIIFLALISIFIVRNVRRRAKDNGVAITEDLIHENELEMSIAIIEAATNNFSLSNKIGEGGFGPVYKGKLPSGQEIAVKKLAERSRQGLEEFKNEVLFISQLQHRNLVKLLGFCIHKEETLLIYEYMPNKSLDYFLFDDGRRSLLHWQMRIDIIIGIARGLLYLHRDSRLRIIHRDLKAANILLDSEMKPKISDFGIARMFGEYQMETKTNRVIGTYGYMSPEYAMEGCFSFKSDVYSFGVMLLEIVSGKRNQGFFHSEHRQLNLLGHAWKLWNEGKTLELIDEVLGDQFQECEALKYINIGLLCVQARPEERPIMSSVLSMLENDNMSLIHPKGPRFYGERFALSDIDSSFSTTNNVTITLLDDGR 805
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 54045591 54049146 - XM_039038486.1 Bhi08g01874 42207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi08g01874 805 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 21 801 - -
Bhi08g01874 805 SUPERFAMILY Protein kinase-like (PK-like) 475 762 IPR011009 -
Bhi08g01874 805 SMART blect_4 36 156 IPR001480 -
Bhi08g01874 805 CDD B_lectin 37 156 IPR001480 -
Bhi08g01874 805 ProSiteProfiles Bulb-type lectin domain profile. 30 151 IPR001480 -
Bhi08g01874 805 Pfam PAN-like domain 333 399 IPR003609 -
Bhi08g01874 805 Pfam Protein tyrosine and serine/threonine kinase 490 760 IPR001245 GO:0004672|GO:0006468
Bhi08g01874 805 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 21 801 - -
Bhi08g01874 805 Gene3D Transferase(Phosphotransferase) domain 1 565 770 - -
Bhi08g01874 805 ProSitePatterns Serine/Threonine protein kinases active-site signature. 610 622 IPR008271 GO:0004672|GO:0006468
Bhi08g01874 805 Gene3D Phosphorylase Kinase; domain 1 450 564 - -
Bhi08g01874 805 SMART serkin_6 489 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi08g01874 805 CDD PAN_AP_plant 333 416 - -
Bhi08g01874 805 Gene3D - 26 153 IPR036426 -
Bhi08g01874 805 SUPERFAMILY alpha-D-mannose-specific plant lectins 79 186 IPR036426 -
Bhi08g01874 805 ProSiteProfiles Protein kinase domain profile. 489 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi08g01874 805 Pfam S-locus glycoprotein domain 214 316 IPR000858 GO:0048544
Bhi08g01874 805 Pfam D-mannose binding lectin 79 182 IPR001480 -
Bhi08g01874 805 ProSiteProfiles PAN/Apple domain profile. 333 416 IPR003609 -
Bhi08g01874 805 CDD STKc_IRAK 495 763 - -
Bhi08g01874 805 PIRSF SRK 1 803 IPR024171 GO:0004674
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi08g01866 Bhi-Chr8:53948779 Bhi08g01874 Bhi-Chr8:54045591 0 dispersed
Bhi08g01872 Bhi-Chr8:54041117 Bhi08g01874 Bhi-Chr8:54045591 0 dispersed
Bhi08g01873 Bhi-Chr8:54041369 Bhi08g01874 Bhi-Chr8:54045591 0 tandem
Bhi08g01874 Bhi-Chr8:54045591 Bhi08g01875 Bhi-Chr8:54093227 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88009 PF07714 PK_Tyr_Ser-Thr 1.50E-48 CL0016 Bhi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi08g01874 - - csv:101214988 1347.41