Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi08g01878 CTAAATAAAATCATTAGTTCTGACTGTTCTTTCGACAAAAACCCATAGAAAACTAAATCTCAATTGACATTTGACGTGATGTTCACCATAGGCCTGGTTCAACTCCACCAGTCATGAAACCCATCACCAACAGCATTCCATTAATCCTTCTTCTCCTCTGCTTTGTTTTGAAAATTTCCAGCAGCATAGATACGATCACATCGACACAATTCCTCAAGGATCCCGAAGCTATTTTGTCCAATCGTGGTTTCTTCGAATTGGGTTTCTTCAGCCCTCCCAATTCCACCAATCGGTTCGTCGGAATTTGGGATAAACGAGTGCCTGTACCAACTATTTTCTGGGTAGCTAACAGAGACAAGCCTCTCAACAACAAATCCGGAGTTTTCACCGTATCGAAGGACGGGAATCTCGTAGTATTAGATGAACACGACAACATTCTTTGGAATTCCAAAGTTTCTAACGCTGGAGTGAATTCCACCGCTCGTCTTCTTGATTCTGGAAACCTTGTTCTGCTGGACTCTACTTCAAGGGCCGTCATTTGGGAGAGTTTCAAAGACCCATCAGACAAATTCTTGCCAATGATGAAATTCATCACCAACTCAATCACAAACGAGAAAGTAGAAATCGTGTCGTGGAAAACCCCTTCTGATCCATCGTCAGGAAATTTCTCCTTTGGAATCGACCCTCTAACGATCCCAGAAGTTATAATTTGGAGAAACAGCCGCCCGTATTGGAGGTCCGGTCCATGGGACGGTCAAGTCTTCATCGGAGTACCTGGTATGAACACTGACTATCTTTATGGAGGTAATCTCATAATCGAAAACAAAACTTACTCTCTCTCAATTGCCAATGCAAACGAAGCTCAATTATACTTCTACTACTTGAACCCCAACGGGACTTTGGAAGAGAAACATTGGAATATTGAGGATCAGAAATGGGAGGTTGCTTGGTCAGCTCCTGAAACAGAGTGTGATGTTTATGGTGCTTGTGGAGCATTTGGGGTCTGTGATTCTCAAAAAACCCCAATTTGCAGTTGTTTGAGAGGTTTTAAGCCAGAGATGGAAGAGGAATGGAACAGAGGAAATTGGAGAAGTGGGTGTGTGAGGAATTCACCATTGAAGTGTGAGAAGAAGAACATCAGTGTTGAAATGGGAAAAGATGAGGATGGGTTTTTGAAGTTGGGAATGGTTAAAGTTCCAGATTCTGCAGCCTGGGTTGTTGTTGCTTCGGAAAATGATTGCAGAATCCAGTGTGCGTCAAACTGTTCTTGTTCTGCTTATGCATATAAAATAGGGATTGGTTGTATGATATGGAGAGGAGATTTAATTGACATTCAACAATTCAAGAATGATGGAGCAGACATTTACGTTCGTGTGGCATATTCAGAAATAGCTGATGAAAGTGGAATCACCAAAGACCTAAAAGTAAGCATTATAGCTTCCGTGGTAACAGGAACCTTAATCCTTATCAGTTGCATATATTGCTTATGGAAAAGAAAAAGGCAGAACAAGTTTTTGATGAACACTGATGTTGATATGAAGCATGATAAAGTGAACGAAGTTAAGCTTCAGCAGCTGCCTGTTTTTGATTTTGATAAGCTGGCAATTGCAACTAACCATTTTCATTCCAATAACAAGCTTGGTCAGGGTGGGTTTGGGCCAGTGTACAAGGGAAAATTGGTAGATGGACAAGAAATAGCAGTAAAGAGGCTTTCAAAGACCTCTGGACAAGGGATTGAAGAGTTTACAAATGAAGTAATGGTGATTTCAAAACTACAACATAGAAATCTTGTGCAGCTTTTTGGTTGTTGTGTCGAGGGAGAAGAAAGGATGTTGGTTTATGAGTACATGCCAAATGGAAGCTTAGATTCAATTATTTTTGATTCAACTAAAGCAAAAGTGTTAGATTGGAGAAAAAGATTCAACATTATTGAAGGAATTGCTCGAGGAGTTCTATATCTTCATAGAGATTCGCGACTAAAAATCATTCATAGAGATCTCAAAGCTAGTAATATTTTACTAGATAGAGACTTAAATCCCAAAATTTCAGATTTTGGTACTGCTAGAATTGTTTACGGCAATGAAGCTCAAGCTAAAACCACAAGAGTTGTGGGTACTTACGGCTATATGTCTCCAGAATACGTATTGAATGGCCAATTTTCAGAGAAATCAGATATGTTTAGTTTTGGAGTTTTGTTGCTTGAAATTATTAGCGGAAGAAAAAATACTAGCTTCTATGAGAATGAACACGCGTCGAGCCTTCTAGGATTTGCATGGAAATTATGGATGGAGGACAACGTAGTTGCTTTGATTGATCAAACAATGTTTGAATTGCATTTTCAAGCAGAGATTTTGAGATGCATTCACGTGGGACTATTGTGTGTTCAAGAATTGGCAAAGGAAAGACCAAATATAACGACAATTCTTTCGATGCTTCACAATGAAATCACAGATCTTCCGATGCCAAAGCAACCTGGATTTAGTAGCAGCAAAATTGAGATTCACACTCGGGCATTCAAACAAAGCCATGTTGGAACTTGCACGCCAAACATGATCACAGCTACCTCATTTGATGGTCGATAGCATATTTATGTAAATACTTTTTAGACTTGAGTTTGTAGTGCTTTTCAATTGAATTGAATTCTTTTCATTTAGTTTCTTTTATATGTTAATGCATGTTACATACTTCTTA 2691 39.17 MKPITNSIPLILLLLCFVLKISSSIDTITSTQFLKDPEAILSNRGFFELGFFSPPNSTNRFVGIWDKRVPVPTIFWVANRDKPLNNKSGVFTVSKDGNLVVLDEHDNILWNSKVSNAGVNSTARLLDSGNLVLLDSTSRAVIWESFKDPSDKFLPMMKFITNSITNEKVEIVSWKTPSDPSSGNFSFGIDPLTIPEVIIWRNSRPYWRSGPWDGQVFIGVPGMNTDYLYGGNLIIENKTYSLSIANANEAQLYFYYLNPNGTLEEKHWNIEDQKWEVAWSAPETECDVYGACGAFGVCDSQKTPICSCLRGFKPEMEEEWNRGNWRSGCVRNSPLKCEKKNISVEMGKDEDGFLKLGMVKVPDSAAWVVVASENDCRIQCASNCSCSAYAYKIGIGCMIWRGDLIDIQQFKNDGADIYVRVAYSEIADESGITKDLKVSIIASVVTGTLILISCIYCLWKRKRQNKFLMNTDVDMKHDKVNEVKLQQLPVFDFDKLAIATNHFHSNNKLGQGGFGPVYKGKLVDGQEIAVKRLSKTSGQGIEEFTNEVMVISKLQHRNLVQLFGCCVEGEERMLVYEYMPNGSLDSIIFDSTKAKVLDWRKRFNIIEGIARGVLYLHRDSRLKIIHRDLKASNILLDRDLNPKISDFGTARIVYGNEAQAKTTRVVGTYGYMSPEYVLNGQFSEKSDMFSFGVLLLEIISGRKNTSFYENEHASSLLGFAWKLWMEDNVVALIDQTMFELHFQAEILRCIHVGLLCVQELAKERPNITTILSMLHNEITDLPMPKQPGFSSSKIEIHTRAFKQSHVGTCTPNMITATSFDGR 822
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 54116092 54119324 - XM_039038479.1 Bhi08g01878 42211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi08g01878 822 Pfam Domain of unknown function (DUF3403) 776 822 IPR021820 GO:0004674
Bhi08g01878 822 SMART ntp_6 348 421 IPR003609 -
Bhi08g01878 822 ProSitePatterns Serine/Threonine protein kinases active-site signature. 624 636 IPR008271 GO:0004672|GO:0006468
Bhi08g01878 822 Pfam D-mannose binding lectin 73 175 IPR001480 -
Bhi08g01878 822 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-13 10 802 - -
Bhi08g01878 822 CDD PAN_AP_plant 334 422 - -
Bhi08g01878 822 ProSiteProfiles Bulb-type lectin domain profile. 25 146 IPR001480 -
Bhi08g01878 822 ProSiteProfiles PAN/Apple domain profile. 337 422 IPR003609 -
Bhi08g01878 822 SUPERFAMILY alpha-D-mannose-specific plant lectins 69 213 IPR036426 -
Bhi08g01878 822 Gene3D Phosphorylase Kinase; domain 1 476 578 - -
Bhi08g01878 822 PIRSF SRK 2 822 IPR024171 GO:0004674
Bhi08g01878 822 CDD STKc_IRAK 509 774 - -
Bhi08g01878 822 ProSiteProfiles Protein kinase domain profile. 503 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi08g01878 822 SUPERFAMILY Protein kinase-like (PK-like) 488 797 IPR011009 -
Bhi08g01878 822 Gene3D Transferase(Phosphotransferase) domain 1 579 783 - -
Bhi08g01878 822 CDD B_lectin 31 149 IPR001480 -
Bhi08g01878 822 Pfam S-locus glycoprotein domain 207 315 IPR000858 GO:0048544
Bhi08g01878 822 PANTHER - 10 802 - -
Bhi08g01878 822 Pfam PAN-like domain 348 407 IPR003609 -
Bhi08g01878 822 SMART serkin_6 503 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi08g01878 822 SMART blect_4 31 149 IPR001480 -
Bhi08g01878 822 Pfam Protein tyrosine and serine/threonine kinase 505 771 IPR001245 GO:0004672|GO:0006468
Bhi08g01878 822 Gene3D - 20 146 IPR036426 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi08g01876 Bhi-Chr8:54115227 Bhi08g01878 Bhi-Chr8:54116092 0 dispersed
Bhi08g01878 Bhi-Chr8:54116092 Bhi08g01880 Bhi-Chr8:54116601 0 dispersed
Bhi08g01877 Bhi-Chr8:54116092 Bhi08g01878 Bhi-Chr8:54116092 0 tandem
Bhi08g01878 Bhi-Chr8:54116092 Bhi08g01879 Bhi-Chr8:54116371 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88013 PF07714 PK_Tyr_Ser-Thr 1.10E-48 CL0016 Bhi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi08g01878 - - cmo:103489252 1476.84