Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi08g01910 CAAAACTTCTCTAATTTCTCTATACCCATCTTGGGGTGTTGGAACTTTACTTTCTTTTTCCTTTTTTTTCCCTCACCCCCAAAACTCTTTTCTCTTCCTCATTGGACGAAGATAATTAAACACAAACTTCGTCTAGGAAAAGAAAAGACCAATAATTTTCAACCCTTTTTCTTACCATCTCAAAAAACCCAAAAAACAAAAAAAACAAAAAATCCAAAAAACAAAAAAAAAAAAACAAAAACAAAAAACAAAAAACAACCACCCCCTGAAAACCCATTTTGAAGATTTGAGTGTACAAACAAAAAATCAGACAAAATGAACGACTTATTCTCGAATTCGTTCAAAAAGTACACGGATCTGAAGCAACAGGCGTATCTGGACAGCATGGAGGCTGGAAATGAGAGTGTAAATTTGGACAGATTCTTTGAAGATGTAGAAAATGTTAAAGATGACATGAAACAGGTGGAGAGTTTGTACAAGAAATTGCAGCAGGCTAATGAGGAGTGCAAGATTGTGCATAATGCCAAGACAATGAAGGAGCTGAGGGGGAGGATGGAGGCCGATGTCACCCAAGTTCTCAAGCGAGTCAAAATGATCAAAGGAAAGCTCGAAGCTCTCGAACGTTCCAATGCCGCTCACCGCAGCCTCCCCGGCTGCGGCCCTGGCTCCTCCGCTGACCGGACTCGAACGTCCGTCGTCAGCGGTTTGGGAAAGAAGCTCAAAGATGTTATGGATGATTTTCAAGGCCTTAGAGCTCGAATGAACGCCGAGTACAAAGAAACCGTCGAGCGAAGGTACTTCACAGTGACTGGGCAGAAAGCAAACGAAGAGACAATAGAGAATTTGATATCAAGTGGGGAAAGTGAGAGCTTCCTGCAGAAGGCGATTCAAGAACAGGGGAGGGGTCAGATAATGGACACAATTTCAGAGATTCAAGAACGACATGACGCTGTGAAGGAAATAGAGAAGAATTTGATAGAGCTGCATCAGATATTCTTGGACATGGCAGCTTTGGTTGAGGCGCAAGGCCACCAACTGAACGACATCGAAAGCCATGTCGCACATGCTAACTCCTTCGTTAGAAGAGGAACAGAGCAACTGCAAGAAGCCAGAGAGTATCAAAAGAGCTCGAGGAAGTGGACTTGCTATGCCATAATTTTGGTGATTGTTCTCATTGTCGTTCTTCTCTTCCCATTCTTAACTTCAATTTTACCTCATTTGTTGTAGAAAGGTTATTCATTTGCTTCTGATTTTCCACTGCCACTCACCCAAAAAAAAGCAATACCCCCTCCAAAAGAGAACAGAGTACAGAGTACAGAGTAGAGAGGCAGAGGATTATTAGAACCAAGAAATTTGTTTGCTTCATTTTCTGTCATTCAATGTGGCGTTTTCTGAGGATGTGTTGGTTGGTACATAGTTGTAAATGTGTTTATAGAGAGAATTTGCTTTCATTTGGATTATCC 1463 41.56 MNDLFSNSFKKYTDLKQQAYLDSMEAGNESVNLDRFFEDVENVKDDMKQVESLYKKLQQANEECKIVHNAKTMKELRGRMEADVTQVLKRVKMIKGKLEALERSNAAHRSLPGCGPGSSADRTRTSVVSGLGKKLKDVMDDFQGLRARMNAEYKETVERRYFTVTGQKANEETIENLISSGESESFLQKAIQEQGRGQIMDTISEIQERHDAVKEIEKNLIELHQIFLDMAALVEAQGHQLNDIESHVAHANSFVRRGTEQLQEAREYQKSSRKWTCYAIILVIVLIVVLLFPFLTSILPHLL 303
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 54935454 54937207 + XM_039039474.1 Bhi08g01910 42243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi08g01910 303 CDD SNARE_syntaxin1-like 202 264 - -
Bhi08g01910 303 PANTHER SYNTAXIN-124-RELATED 6 295 - -
Bhi08g01910 303 PANTHER SYNTAXIN 6 295 IPR045242 -
Bhi08g01910 303 CDD SynN 33 190 IPR006011 GO:0016020
Bhi08g01910 303 ProSitePatterns Syntaxin / epimorphin family signature. 209 248 IPR006012 GO:0005484|GO:0006886|GO:0016020
Bhi08g01910 303 Gene3D - 193 294 - -
Bhi08g01910 303 Pfam SNARE domain 240 291 IPR000727 -
Bhi08g01910 303 Gene3D - 33 160 - -
Bhi08g01910 303 SMART tSNARE_6 198 265 IPR000727 -
Bhi08g01910 303 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 203 265 IPR000727 -
Bhi08g01910 303 Pfam Syntaxin 35 238 IPR006011 GO:0016020
Bhi08g01910 303 SMART SynN_4 28 154 IPR006011 GO:0016020
Bhi08g01910 303 Coils Coil 33 70 - -
Bhi08g01910 303 SUPERFAMILY t-snare proteins 32 258 IPR010989 GO:0016020|GO:0016192
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g01774 Bhi-Chr3:37337842 Bhi08g01910 Bhi-Chr8:54935454 3.97E-113 dispersed
Bhi03g02299 Bhi-Chr3:50565201 Bhi08g01910 Bhi-Chr8:54935454 2.98E-93 dispersed
Bhi08g01910 Bhi-Chr8:54935454 Bhi11g01551 Bhi-Chr11:44646765 1.84E-84 dispersed
Bhi08g01910 Bhi-Chr8:54935454 Bhi11g02367 Bhi-Chr11:64444391 1.29E-123 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi08g01910 K08486 - csv:101217140 568.155