Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi08g01969 GATCATGCACAACCATCATTTTACGCCCCTTGTAATAAATTTTCTGTTTTTGTTTCTTTGTGGGGATGTCTTTCCCTTATGGAGCCCATGGCTGCCTGTGGGATCAAGTTCCCAGTTTTTCTCTCTCTCTTCTTTCATTTAGCTAGAGAGAGCTAGCTAGCTGCTATTTCTCATCTTAAGGACATTTCACAATATCACCTGCTGAAGATGAGGATTATTAGAAGAAAACAACGAGAGAAAGCCGGTACCCCCTCCCCCTCCCCTTCAAATAATTAAATATTAAAAAAACAAAAGCCGATAGTTTTTTCTTTTTTTTTTTTTTAAAAAAAAGATATTTATAAAAGAAAGCTGAGGTAACCGAAAGTAATACCTTCCTCCTTTTCCTTCTCTCTCTTCCACCCCTTCCCCCTCTAATATCTATCTATCTATCTATCTTCCCCCTCAGGCCCTCAGACCTATACTCTCCCTCTCCCCACAACCAAACCTTCGTTCATTCATATTTTCAGAGAAAACTAAGAAAAGAAAAGAGAAAAGAGAAACAAATTAGTTGGTTTCTTGAAAAAATTCGATGATAGGCAATATGGCCACCTCGGCCTCCCCCGTTCTTCCTTCGGAACCTTACTCTTGCTTAGAAAATGGAAATAACAACAACAACAAGAGGAAAAGAAGGCCTGCAGGCACCCCAGATCCGGATGCAGAGGTGGTGTCTCTGTCCCCAAAAACACTGCTAGAATCGGACCGGTATGTGTGCGAGATCTGCAACCAAGGGTTCCAGAGAGACCAGAACCTGCAGATGCACAGGCGGCGGCATAAGGTCCCTTGGAAGCTGCTGAAGAGGGAGACTCCTGTTGTGCGGAAGAGGGTTTTCGTGTGCCCGGAACCCACCTGCCTGCACCACGACCCTTGCCATGCCCTCGGTGACCTCGTTGGCATCAAGAAGCACTTCCGAAGGAAGCATAGCAACCACAAACAGTGGGTTTGTGAAAAATGCTCCAAGGGCTACGCCGTTCAGTCCGATTACAAGGCCCATCTCAAAACCTGTGGCACCCGAGGTCACTCTTGCGATTGCGGCCGTGTTTTCTCCAGGGTGGAGAGCTTTATAGAGCACCAAGATGCTTGCAATATGGGGCATTTGATCAGGCAAGAATCCCAAACCATCCAGCCCGCATGTTTGTCCAGAACGGCTTCCAGTCCAAGCCCATCCAGTGACACTAACTTCAGCAGCGCCGCTCCCAATAATTGGCCTGCTCTCGTAGCGCCACCCACATTAAAGCCCGTGGATGCCATCTTCTTAGCCCCCACGGACGACTCCAACAACAACACTGTCTCTAATAACGATCACAATTTAGACCTAAAACTGTCAACTGCATCAAATGGTGTAGAAGGGCGGGGCAATAATAAAGGTTCTTCAACCAAACTCCAGCTCTCCATCGGGTCGTTTGATTTTGGGGACAAGAAAAAGATGGATCAGAAGAAAGGTGGGGTCCGGGGCGGGGCTGGGGATGTTAGAGAAGAAGCTCGGGAGGAGCTAAGGGTGGCAATGGTGGAGAAGGCATATGCGGAGGAAGCGAGACAACAGGCAAAGCGGCAAATAGAAATTGCAGAGGAAGAATTCGGGAATGCAAAGCGGATGAGGCAACAGGCACAAGCGGAGTTAGATAAGGCCACAGCTCTTAAACAAGCAGCAATCAAACAGATAAATTCAACCATTCTTGAAATCACTTGTCAAGCTTGCCAGAAGCAGTTTCAAGCCAAAACTAAACCGACAACAACGACGACAACAACAACTACTACGACGACAAGTGCAGCCACCGATCATGACAATTACTCCGTAGCATTCAGTTATGTCTCCTCCGTCATTACAACCGAAGGTGAAGTAGAGAAAGATCAACCAACCATTATACCTAAACCGCCCAACAATTAACCCTACCCGTACCCAACGACCCTTCTCATATATCATATATATTATATTATATGGGATATGATTTTTAATTGTTTCTTTCTTTAATTTGTCACGATCGGTGATAAATAATCATCCTTTAGTATTATTTTATAATGCTTCTACTAGTCAATAAATATACAGAAAGAGTGGTGTGGTTGTAGGTGGAGGGATGGAGTGTTGTACCCTTTTGGTAATTAATTATAATTGGAGAGTTGAATATAGAATGTGACAGTAAGCCATTTTGTGTGTTTGTTTTGGTTAGAACGAAGTGAAGAAGTTGATGAAATTGAGGGCATAGCGAAGCTAGGGTATATATATTGAAATGAGAGAAGGGTAAGGCAGTGAAATATGTGGGATTTTGGATTTAGTGTTTGGAGTATATATGCAGGTGCAGGTGCAGAGGCGTTGTGTGTTGGTCATATCACTGGACTGATGAAGGATATGATATGACTCTTTTTTTCCTTTTTTCCTTCTTCTCTTCAGCAATTAAGAGCGGCACTGACCAATATTTAAAACTGAATATTATTACATTACGTCAGTAAAAAGTAAATAAGAAAAAGGAGGGAGAAAGAGGAGAGAGGAATGTGAATATGTGTAGGGCATGGAGTGAGTGAGTGAGTAAATGTGAATGGGATCCCAGGCACAGGCACAGGCACAGGCACAGGCAGCATGTTTTTCAGTGCCACTGTGGTAAAGGGGTTGTTGATGGCATAATCAGCCTTCAGTCGTCCCTCTCAACTCAACTAGCAGACACCATTCATATTCATAATCACCACTTTCTCTCTCCAAACCCACATCTGAATCAGCGCCCTTTTTTTCCCTTCTTCTTCTTCATACTCCAAATTAAACCCTTGTCCCAAAAAAAAAAAAAAAAAA 2818 43.93 MIGNMATSASPVLPSEPYSCLENGNNNNNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPVVRKRVFVCPEPTCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDACNMGHLIRQESQTIQPACLSRTASSPSPSSDTNFSSAAPNNWPALVAPPTLKPVDAIFLAPTDDSNNNTVSNNDHNLDLKLSTASNGVEGRGNNKGSSTKLQLSIGSFDFGDKKKMDQKKGGVRGGAGDVREEAREELRVAMVEKAYAEEARQQAKRQIEIAEEEFGNAKRMRQQAQAELDKATALKQAAIKQINSTILEITCQACQKQFQAKTKPTTTTTTTTTTTTSAATDHDNYSVAFSYVSSVITTEGEVEKDQPTIIPKPPNN 451
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 56800257 56803768 - XM_039037589.1 Bhi08g01969 42302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi08g01969 451 MobiDBLite consensus disorder prediction 1 46 - -
Bhi08g01969 451 Pfam Zinc finger, C2H2 type 59 81 IPR013087 -
Bhi08g01969 451 PANTHER OS03G0310200 PROTEIN 14 438 IPR039288 GO:0009630
Bhi08g01969 451 ProSiteProfiles Zinc finger C2H2 type domain profile. 59 81 IPR013087 -
Bhi08g01969 451 SMART c2h2final6 136 163 IPR013087 -
Bhi08g01969 451 SMART c2h2final6 59 81 IPR013087 -
Bhi08g01969 451 SMART c2h2final6 100 130 IPR013087 -
Bhi08g01969 451 MobiDBLite consensus disorder prediction 1 26 - -
Bhi08g01969 451 ProSitePatterns Zinc finger C2H2 type domain signature. 61 81 IPR013087 -
Bhi08g01969 451 Gene3D Classic Zinc Finger 121 199 - -
Bhi08g01969 451 SUPERFAMILY beta-beta-alpha zinc fingers 58 156 IPR036236 -
Bhi08g01969 451 PANTHER PROTEIN INDETERMINATE-DOMAIN 16-LIKE 14 438 - -
Bhi08g01969 451 Gene3D Classic Zinc Finger 37 99 - -
Bhi08g01969 451 Coils Coil 314 376 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi02g00518 Bhi-Chr2:9955995 Bhi08g01969 Bhi-Chr8:56800257 5.09E-18 dispersed
Bhi08g01320 Bhi-Chr8:40147620 Bhi08g01969 Bhi-Chr8:56800257 5.88E-169 dispersed
Bhi08g01969 Bhi-Chr8:56800257 Bhi12g00981 Bhi-Chr12:29828061 4.47E-144 dispersed
Bhi08g01969 Bhi-Chr8:56800257 Bhi09g03143 Bhi-Chr9:80582465 4.63E-72 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1755 PF00096 zf-C2H2 0.0043 CL0361 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi08g01969 K25871 - csv:101209426 731.095