Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi08g01978 TGTGATACAGTTTTAAGGTTTGAACTCCTTTCCGCTCATAAAATCCACCAAATTAAACTAAAAAATCTAGCTGTGTTGAGCAGTCAATAGCTTGTGAGTATGATAATGGATGAATAGCGTTATGGTTCGAAAAAGTTGCAGAAGTGTTATGAAGACTGCCCTACATTGAAGGAAGGTGGTGGGACCCGACTCCGACGTGACGTGTCTTTTGGTTGCTTCAGGCGAGGAGGGCATCACCAAAATATGGTTTTGACAACAGTTGCAGACTCTGGAGATTCTGTGAACTGCACTTTTGGTTCCAGATATCTCCGCTCTCCTCCTCCCAAGTTCAAACTGGGGGAGCAATCTATTCCCAAGGATGCAGCGTACCAGATCATACACGATGAGCTGATGCTGGATGGCACTCCCAGGCTGAACTTGGCTTCTTTTGTTACCACTTGGATGGAGCCAGAGTGTGATAATCTCATCATGGCTTCTCTCAACAAGAACTATGTTGACATGGATGAGTACCCAGTCACTACTGAGCTACAGAATCGCTGTGTCAATATGATTGCTCGCCTCTTTCATGCCCCCATCGGAGATCAAGAAGCTGCAGTTGGTGTGGGGACTGTCGGATCATCAGAGGCCATTATGCTTGCGGGTCTTGCTTTTAAGAGGAAATGGCAGCACAGAAGAAAATCTCAAGGCAAACCCTATGATAAGCCCAACATAGTCACTGGTGCTAATGTCCAGGTGTGCTGGGAGAAGTTTGCAAGGTATTTTGAGGTTGAGCTAAAGGAGATTAAGCTTTCTGAAGGGTTTTATGTGATGGATCCAGTGAAGGCTGTTGAACTGGTTGATGAGAATACTATTTGTGTTGCAGCAATTTTGGGGTCTACTCTGACTGGAGAGTTTGAGGATGTAAAACTCCTTAATGAACTTCTGTCTAAGAAGAATAAGGAAACTGGTTGGGACACCCCAATTCATGTGGATGCAGCCAGTGGAGGGTTTATTGCCCCATTCCTTTATCCGGATCTCGACTGGGATTTTCAATTGCCTTTAGTGAAGAGCATCAATGTGAGTGGTCACAAGTATGGGCTTGTGTACCCTGGTGTAGGATGGGTTGTTTGGCGGAGTAAAGAGGATCTGCCTGAGGACCTTGTCTTCCACATTAACTATCTTGGTTCTGATCAACCCACCTTCACTCTCAACTTCTCAAAAGGTTCTAGTCAGATCATTGCTCAATATTATCAGTTTATACGCCTTGGCTTCGAGGGATACAGAAACGTGATGGAGAACTGCAGGGAGAATGCAAGAGTGCTGAGAGAGGGAATAGAGAAGATGGGAAAGTTTGAGGTTGTTTCCAAGGATGTTGGAGTGCCCTTGGTAGCCTTCACTCTCAAAGACAGCAGCAAGCACACCGTGTTCGAGATATCAGAGAACCTGAGGAGGTTTGGATGGATCGTGCCAGCTTACACGATGCCACCAGACGCTCAGCACATTGCAGTGCTGCGTGTGGTGATTAGGGAAGACTTCAGCCGTAGCTTGGCGGAGAGACTGATCTCGGACATCGACAAAGTCTTGAAGGAAGTCGAGGCACTGCCAAGTCGGGTGTCTGTGAAAGCAGCAGAAGTGAAAGCTGGGGTTAAAGATGGTGGGGGAGTTACAAAGCATGTGAAGAAAAGTGACCGGGAGATTGAGGAGGAAGTAACTACATATTGGAGACGGCTCGTGGATGGCAAGAGAACTGGTGCTTGCTAG 1740 46.67 MVLTTVADSGDSVNCTFGSRYLRSPPPKFKLGEQSIPKDAAYQIIHDELMLDGTPRLNLASFVTTWMEPECDNLIMASLNKNYVDMDEYPVTTELQNRCVNMIARLFHAPIGDQEAAVGVGTVGSSEAIMLAGLAFKRKWQHRRKSQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEIKLSEGFYVMDPVKAVELVDENTICVAAILGSTLTGEFEDVKLLNELLSKKNKETGWDTPIHVDAASGGFIAPFLYPDLDWDFQLPLVKSINVSGHKYGLVYPGVGWVVWRSKEDLPEDLVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYRNVMENCRENARVLREGIEKMGKFEVVSKDVGVPLVAFTLKDSSKHTVFEISENLRRFGWIVPAYTMPPDAQHIAVLRVVIREDFSRSLAERLISDIDKVLKEVEALPSRVSVKAAEVKAGVKDGGGVTKHVKKSDREIEEEVTTYWRRLVDGKRTGAC 498
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 57030322 57032974 - XM_039038341.1 Bhi08g01978 42311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi08g01978 498 Gene3D - 65 359 IPR015421 GO:0003824
Bhi08g01978 498 Gene3D - 1 64 - -
Bhi08g01978 498 TIGRFAM Glu-decarb-GAD: glutamate decarboxylase 16 443 IPR010107 GO:0004351|GO:0006536|GO:0030170
Bhi08g01978 498 PANTHER GLUTAMATE DECARBOXYLASE 1 498 - -
Bhi08g01978 498 Gene3D - 360 447 - -
Bhi08g01978 498 SUPERFAMILY PLP-dependent transferases 14 444 IPR015424 -
Bhi08g01978 498 CDD DOPA_deC_like 58 438 - -
Bhi08g01978 498 Pfam Pyridoxal-dependent decarboxylase conserved domain 36 380 IPR002129 GO:0016830|GO:0019752|GO:0030170
Bhi08g01978 498 PANTHER GLUTAMATE DECARBOXYLASE 1 498 IPR010107 GO:0004351|GO:0006536|GO:0030170
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi08g01978 Bhi-Chr8:57030322 Bhi12g01215 Bhi-Chr12:36198120 0 dispersed
Bhi08g01977 Bhi-Chr8:57030061 Bhi08g01978 Bhi-Chr8:57030322 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi08g01978 K01580 - csv:101210903 957.207