Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi08g01980 TATCTAATTTCCATCCATTTAGACCAAAATTATCTTTGTTTCTTTGTTGTTTTTCTTTTGTTTTTTGAATAAGAATTAAAATAGATGGAATTTTATGATTAGGTTTGAGGAGAAAATTTGGAATGTAGAGAGGATGGGGGGAGGGAAAATGTTGAGAATTGCTGAGTTTGATGGGGTAATTTCATGGGTAAGAAAAGCAAGAGGGAATGGGTTTGAAATTGGAAAGCATGAGAAAGAGAGAGAGGAACAGAGGATGACCGGAAAATGAGAAAAAAGATGGGGCGGTTGACGGCGGAGATAGGGAGAGGGGTGACGGCGACATTAATATCAAAATGAAGGGTTTCCATAATAGTATACACACGTGGGGGCTCAGGGTCAATATTTAATATATGGCCATTCCATTCCCACTCAAACTTTTTCTTTTTCTTTTTCTTTTTCTTTACTCATTCATTCATTCATTCCCCCATCTCTAGTTTATAAATCCAGAGGAGCAACCCAACTCACAGTTTCTCTTATCTTTTCATTTGAATTTTAAAGGATGAATTTCCCTTGTGCTTGCAATGGGAATGTAAATGGAAATGGGTTTTCAGTTACAATTTTGTGTTTGTTTCGTTGAATTAGAAAGAGAGTAATTACGGTGTTGGCGGACGGCGGAGGAAGGGTGGCTAACGGATCATCACCGGCGCTGACTTCGCCTTTTTCTCTGCCTTTCTTCTACGTATCTCTTTAATTATCTCTTCAATGATAAATACGCTCCAAGGTTTCTCTCCCAAATCAAAGCCTCCATCCAATTTTTCTGTTTCTTCAACTCCGCCGTAACCGTTGAGATTTGGATATTTGAGCATATTCAAATTCCAATCACTCTTTGTCGAAGCGCCAAGCCCACCATTGTAGTGGAAGGCTTGTTTTGTCGTCTTCAAAGGGGGAAAAATGTTAAAGATATACACCCATCATTTCTTCTTCCTTGTTTGTTTGCTGTCGTACTCATTCGTATTACACATCAAATTTCAGTCCATGGTATTATTATATTCATGTTGTTTTCCATGAAGATGAAATGAGATGCTCCAACTCATTAACTGACTCCACACAACACAAGCATTAAGCATACGCAATGGACTTTGGCGGTGGCTCCGGTTGGGACAACGATTCCTCCTCCGACCCTCAACGCAGGAAAAAACGCTACCATCGTCACAATGCCAACCAGATTCAGAGACTCGAGGCAATGTTCAAAGAGTGCCCACACCCGGATGAGAAGCAGAGATTACAGTTAAGCAGAGAGTTGGGATTGGCTCCTCGCCAAATCAAATTTTGGTTCCAGAACCGGAGGACCCAGATGAAGGCTCAACATGAAAGGGCAGATAATAGTGCACTTCGGGCAGAGAACGACAAGATTCGATGTGAGAACATAGCCATCAGAGAGGCACTAAAAAATGTCATTTGTCCCTCCTGCGGTGGCCCTCCACTTCAGGACCCCTACTTCGACGAGCACAAACTTCGAATTGAAAACTCCCATTTGAAAGAAGAGCTTGAGAGAGTATCTAGCATTACAGCCAAGTACATTGGGAGGCCAATCTCTCAACTTCCACCCATTCAGCCTTCTCATTTTTCCTCCTTAGAGCTGTCCATGGGTAGTTTTCCCTCCCAAGAAGTGGGATGCCCTTCTCTTGATCTTGATTTACTTCCTGCAAGTTCTACAAGTGTTCCCAGTTTGCCATACCATCACCCAATTCACCTCACCTCCGTGGATAAGTCCCTCATGACTGAAATTGCCACAAATGCGATGGCAGAGCTGCTTAGGCTTTCCCAAACTAATGAACCATTCTGGATGAAATCATCAACTGATGGTCGCGACCTTCTCGACCTTGAAACCTATGAACATGCTTTTCCAAGACCCAACACCCCCTTGAAGAATCTCCATTTTCGCACGGAAGCATCTAGAGATTCAGGCATCGTGATCATGAGTAGTGCAGCATTGGTTGACATTTTTATGGACTCGAACAAATGGACAGAGTTATTTCCCACAATTGTCTCAATTGCAAGAACAATTGAAGTTATATCGTCTGGAATGTTGGGAAGTCAGAATGGCTCCTTGCAACTGATGTACCAAGAATTGCAGCTACTCTCCCCATTGGTTCCAACTCGTCACTTTTACGTCCTCCGTTATTGTCAACAAATTGAGCATGGTGTGTGGGCCGTGGTTGATGTTTCCTACAGTATCCCCAGAGAAAACCAAATAGTTTCTCATTCTCAATGTCACCGCTTTCCCTCTGGTTGCTTGATCCAGGACATGCCTAATGGTTACTCCAAGGTTACTTGGATTGAGCATGTGGAAGTGGAAGATAGAGGCTCGACTCATTGGCTTTTTAGAGATCTCATTCATAGTGGATTAGCCTTTGGTGCTGAACGGTGGCTTGCAACTCTTCAGCGGATGTCTGAGAGGTTTGCCTGTTTAATGGTGACTGGTAGTTCCAATCAAGATCTTGGCGGAGCAATTCCATCACCAGAAGGAAAAAGAAGCATGATGAAACTAGCACAACGAATGGTGAACAATTTCTGTGCTAGTATCAGCACATCCCATGGACACCGTTGGACCACCCTTTCTGGGATGAATGAGGTTGGTGTTCGTGTCACGGTGCATAAAAGCACAGATTCTGGCCAACCTAATGGTGTGGTTCTTAGTGCAGCTACAACCATTTGGCTACCAGTTTCCCCTCAAACCATCTTTAACTTCTTTAAGAACGACAGAACCAGATCCCAGTGGGATGTTCTCTCAGATGGCAATCCAGTTCAAGAGGTTGCTCATATATCCAACGGATCCCATCCAGGGAATTGCATATCTGTTCTCAGAGCTTTCAATACAAGTCAGAACAACATGTTGATTCTCCAAGAGAGTTGCATAGACTCATCAGGGTCACTTGTTGTGTACTGCCCTGTGGATCTACCGGCCATGAATGTTGCAATGAGTGGGGAGGACCCATCAAGTATTCCTTTACTACCCTCAGGATTTACAATTTTACCAGATGGTCGACGGGACCAAGGAGAGGGTGCATCGAGCAGCTCAGACGTGCATAACAGGTCAGGGGGCTCGCTGGTGACGGTTGCATTTCAGATACTAGTGAGCAACTTGCCTTCTGGGAAGCTGAACTTGGAGTCAGTGACAACAGTTAATAACCTTATCAGCACCACTGTCCACCAAATCAAGACAGCCTTAAATTGTCATAGTTCCTGAGGAGAGGAGGAAGGGAAGAGAAGGTTACATCCAATTCAACACTATTTTCACTTTTTTTTTTTTCTCTTTTTCTTTTTTGTTTTGGTTTTTGGAGCTCTACTCCACAACTGTTTGGATCTCACATAACATTAATACATTGATGAGATGTGGGAGTGTTTGTGGTGGCGAAATTGAATCTGAGGGTTAGTTGGTGGCTTTGAATGTGCTGAACCATTATTTACTGCTGCTGCCAAAGCAAAGTTGCTGCCATCCCACTCCCATTTTACAGCCAATATTGTTGTTGTTATCATTATTAATTGGTTTTGTTTAGTTTAGTTTTGGGGGTTTGGGGAGGAGCTCTTCATGTTCATTATCTCAGCTCCAGAGTCCACTGAGAGAGTCAAGAACGCACCATATGTGTTTCCACACTTTTTTTCTAAGCCATTCATTTCACACCAATGTTGCAAACTTTGTATGGTTCGGGCATTGACTCTCAAATAGATACTTTACTTTACGCTATCTTTCCTTCTTTTTCTTCGTTCTGCGTCTTATTGGTTCTTGTTTTATGTGACATAATTCTATCCTCCGTCTGTATTCTGAACAATATTGTTTTGCC 3824 42.86 MDFGGGSGWDNDSSSDPQRRKKRYHRHNANQIQRLEAMFKECPHPDEKQRLQLSRELGLAPRQIKFWFQNRRTQMKAQHERADNSALRAENDKIRCENIAIREALKNVICPSCGGPPLQDPYFDEHKLRIENSHLKEELERVSSITAKYIGRPISQLPPIQPSHFSSLELSMGSFPSQEVGCPSLDLDLLPASSTSVPSLPYHHPIHLTSVDKSLMTEIATNAMAELLRLSQTNEPFWMKSSTDGRDLLDLETYEHAFPRPNTPLKNLHFRTEASRDSGIVIMSSAALVDIFMDSNKWTELFPTIVSIARTIEVISSGMLGSQNGSLQLMYQELQLLSPLVPTRHFYVLRYCQQIEHGVWAVVDVSYSIPRENQIVSHSQCHRFPSGCLIQDMPNGYSKVTWIEHVEVEDRGSTHWLFRDLIHSGLAFGAERWLATLQRMSERFACLMVTGSSNQDLGGAIPSPEGKRSMMKLAQRMVNNFCASISTSHGHRWTTLSGMNEVGVRVTVHKSTDSGQPNGVVLSAATTIWLPVSPQTIFNFFKNDRTRSQWDVLSDGNPVQEVAHISNGSHPGNCISVLRAFNTSQNNMLILQESCIDSSGSLVVYCPVDLPAMNVAMSGEDPSSIPLLPSGFTILPDGRRDQGEGASSSSDVHNRSGGSLVTVAFQILVSNLPSGKLNLESVTTVNNLISTTVHQIKTALNCHSS 705
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 57139252 57143946 - XM_039037768.1 Bhi08g01980 42313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi08g01980 705 Gene3D - 216 443 IPR023393 -
Bhi08g01980 705 Pfam Homeodomain 21 76 IPR001356 GO:0003677
Bhi08g01980 705 CDD homeodomain 20 79 IPR001356 GO:0003677
Bhi08g01980 705 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 5 703 IPR042160 -
Bhi08g01980 705 MobiDBLite consensus disorder prediction 636 655 - -
Bhi08g01980 705 SUPERFAMILY Bet v1-like 464 697 - -
Bhi08g01980 705 SUPERFAMILY Bet v1-like 211 444 - -
Bhi08g01980 705 CDD START_ArGLABRA2_like 213 442 - -
Bhi08g01980 705 Pfam START domain 219 442 IPR002913 GO:0008289
Bhi08g01980 705 ProSiteProfiles START domain profile. 209 446 IPR002913 GO:0008289
Bhi08g01980 705 MobiDBLite consensus disorder prediction 1 26 - -
Bhi08g01980 705 SMART START_1 218 443 IPR002913 GO:0008289
Bhi08g01980 705 Gene3D - 9 94 - -
Bhi08g01980 705 ProSitePatterns 'Homeobox' domain signature. 53 76 IPR017970 GO:0000981|GO:0006355
Bhi08g01980 705 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ROC8 5 703 - -
Bhi08g01980 705 ProSiteProfiles 'Homeobox' domain profile. 18 78 IPR001356 GO:0003677
Bhi08g01980 705 SUPERFAMILY Homeodomain-like 7 78 IPR009057 -
Bhi08g01980 705 SMART HOX_1 19 82 IPR001356 GO:0003677
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g01768 Bhi-Chr1:37887225 Bhi08g01980 Bhi-Chr8:57139252 0 dispersed
Bhi01g01769 Bhi-Chr1:37887225 Bhi08g01980 Bhi-Chr8:57139252 0 dispersed
Bhi05g00458 Bhi-Chr5:9729948 Bhi08g01980 Bhi-Chr8:57139252 0 dispersed
Bhi05g00459 Bhi-Chr5:9729948 Bhi08g01980 Bhi-Chr8:57139252 0 dispersed
Bhi08g01980 Bhi-Chr8:57139252 Bhi05g01315 Bhi-Chr5:46309184 0 dispersed
Bhi08g01980 Bhi-Chr8:57139252 Bhi08g01981 Bhi-Chr8:57140052 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1757 PF01852 START 6.70E-48 CL0209 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi08g01980 K09338 - csv:101215660 1369.37