Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi08g01986 ATTATTATTCAACAATATTCCGTGTTTCCCCTTAATCGCTTGCCCTAACGACTAGCATCCCCAATTCTGCTTTATCTCTTCGCATTCCTAGCCTCTGCCTCTGCCTCTGTCTCTGTCTCTTAATCCTTCATTAGCTGCGTCATGGCTCAGACGGCAAATCGATCCAAATTGCGGTGGGGAGAGCTAGATGATGACGACGGCGATCTGGATTTTCTTCTACTGCCTAAGAAGATTATCGGCCCAGACGAGAACGGCTTGAAGAAAATTATTGAATATCAGTTTAACGAAGATGGTAATAAGGTCAAGATCACGACCACCACGCGTACTCGCAAGCTCGCCCATGCTCGCCTCAGTAAACACGCCGTTGACCGCCGATCTTGGGCAATGTTCGGCGACGCTGTCCACGAAGACGTCGGCAGCCGCCTTACTATGGTTTCCACTGAGGAGATCCTCCTGGAACGCTCTCGTGCTCCTGGTAGCAAACCAGAAGAGCCAAAGGTGGCAGGAGACCCTCTAGCTCAACTTGGAAAAGGTGGTGCTGTTCTTATGGTGTGTCGTACTTGTGGCAAAAAGGGTGATCACTGGACCTCAAGGTGCCCTTACAAAGACTTGGCACCGCAAGGTGAGGGATTGGATAAGACTTCCGCACCAGAGGCTACAGCTGCTGCACCTGGTGCAACAAAGGGAACATATGTTCCTCCAGGTATGAGAGCAGGAGCAGACAGGAGTGGAACTGATATGAGACGTAGGAACGATGAGAACTCTGTTCGTGTCACCAACCTCTCGGAGGATACGAGAGAGCCTGACCTGCTTGAGCTTTTCCGACCTTTTGGTGTGGTTAGCCGAGTTTATGTTGCAGTTGATCAGAAGACTGGTATGAACAGAGGATTTGGTTTCGTGAACTTTGTGAACCGTGAGGATGCTCAAAGAGCAATCAACAAACTGAATGGATATGGTTATGATAATCTCATCCTTAGAGTTGAGTGGGCCACTCCAAGGGCTACTTAAATGCCTTATTTTTGAAGCTTACTTTTCAAGCTCCTGTGATTTGTTTACTCTTATAGCAGCAGCGCCCCCCGCCAACCCCGACACCCCCACCACCAGAAAACACACACACACACATTTTGTTACGTCTTCTTGAGGTTCCTTGCGTTGAGAAAATGTTAAATTCAGGACTTCTTGTACTTGATAGTCAAATTTTTTACCTTTCGTTGGTTAATGTCAGAAGGAATGGTGTTTCTCAACATTTTCCCCAACATGATAGTCGTACAAAACTGCAAATAAGAAAATGCTATGTTTTACAGAC 1306 47.17 MAQTANRSKLRWGELDDDDGDLDFLLLPKKIIGPDENGLKKIIEYQFNEDGNKVKITTTTRTRKLAHARLSKHAVDRRSWAMFGDAVHEDVGSRLTMVSTEEILLERSRAPGSKPEEPKVAGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLAPQGEGLDKTSAPEATAAAPGATKGTYVPPGMRAGADRSGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGVVSRVYVAVDQKTGMNRGFGFVNFVNREDAQRAINKLNGYGYDNLILRVEWATPRAT 288
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 57334467 57336567 + XM_039037727.1 Bhi08g01986 42319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi08g01986 288 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G 7 287 - -
Bhi08g01986 288 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 209 275 IPR000504 GO:0003723
Bhi08g01986 288 SUPERFAMILY RNA-binding domain, RBD 199 286 IPR035979 GO:0003676
Bhi08g01986 288 Pfam Eukaryotic translation initiation factor 3 subunit G 32 157 IPR024675 -
Bhi08g01986 288 CDD RRM_eIF3G_like 208 283 IPR034240 -
Bhi08g01986 288 Hamap Eukaryotic translation initiation factor 3 subunit G [EIF3G]. 9 287 IPR017334 GO:0003743|GO:0005737|GO:0005852
Bhi08g01986 288 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G 7 287 - -
Bhi08g01986 288 Gene3D - 164 288 IPR012677 -
Bhi08g01986 288 SMART rrm1_1 208 281 IPR000504 GO:0003723
Bhi08g01986 288 MobiDBLite consensus disorder prediction 163 205 - -
Bhi08g01986 288 PIRSF Transl_init_eIF-3_RNA-bind 1 288 IPR017334 GO:0003743|GO:0005737|GO:0005852
Bhi08g01986 288 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 207 285 IPR000504 GO:0003723
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g01898 Bhi-Chr1:41540004 Bhi08g01986 Bhi-Chr8:57334467 0 dispersed
Bhi08g01986 Bhi-Chr8:57334467 Bhi06g01559 Bhi-Chr6:45949813 4.79E-10 dispersed
Bhi08g01986 Bhi-Chr8:57334467 Bhi09g00296 Bhi-Chr9:6342711 5.58E-11 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi08g01986 K03248 - csv:101212619 530.406