Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi08g02151 ATCTCTGATAATTTTTTCTTTTTTATCGTCAAAACTTTGGAACGTCACTTTCCAAAGTTTTCCTACGATGGCTGCCATTGCTAATTCATACATACTCTAACAATTTCTCATTTCTCACTTCCTTTCATCCAACGCGGAATCCCCATTTCTCTTCTTTTCATCTTCGTTTTTAAAAACCCTTCCTTTTCCAATTCTATCTTCTTGTGCTTTTCAACAGTTTACCATTCCAAAAACTTGCTTACCTTCACGACCCTTTCTACAATCAACAGTTTTTCGTCTCCTTCGACTCTGATTTTCATCTGGGATTTCTTTATTCTTCCATTTTTTTTTTGAGTTTTCAGTTCTTTACTTGCGATTTCGCCAGTCGGTTGTAAGACCGAAGAGATCTTTGACTAAGGAGGAAAGGGGCGTAGACCCTTTTGGATTTTCCTCTTGTATCGTCCATTTTTCTGTGTTTTGTTGAATTACAGGAACCCTAGAACTTTTGGGGGTTGGTGGAATTATTTTGTTTATGGCCGCCGCTGCGATTTTCTCGTCTTTACGAAGAAGGAGATCGCCGTCGTTGGAGGCCTTTTTGGCCCCCGTTGACCTCTCCGATGTGGCTTTAGTTCAAACCTTGGCGATAGTGGCGACGGGGCTAGTTTCTCGATTTTCAGAGAAATCCTTCTTCTTCCAGCGGAGGAATTCGCGATCTCTGATAAGGAAATTGGAGGTTTGTTTAGTCTTTTTGGAGTTCTTGAAGGAAACGGATGCGAATTTGCCTCATACGGCGTTGCTCTGTTTGAAGGAGCTTTATTTGTTGTTGTATCGGTCTAAGATACTTCTTGATTATTGCTCTGAATCGAGTAAGTTGTGGCTGTTGCTTCAGAACCACTCGATTTCGGGGCATTTCAATGATTTGAATTTAGAGTTGTTGACATTTTTTGATGTTTTCCCTCTTGAGGAAGTTGAATTGGGGGTGGATGTTAGAGAGCAGCTTGAGCTTTTGCAGAAGCAGTTGAGAAGAACTAGAATGTTTGTTGATGAACGTGAAGAGGTGTTGAGGACTCGTTTCCTATCGTTTCTCGACGAGTTTGAGAACGGGAGGCTTCCCAATCCGAGGGAAATGAGGGAGTTTTTTGTGGATAAGTTGAAGATTCGGAATGCGAAGAGTTGTAGAGCTGAAATTGAGTTCTTGGAGGAGCAGATTGTCAATCATGAGGGGGATATCGAGCCCACGGTAGCAGTGTTAAACGGTTTCGTTGCTTTTACTAGATACAGTAGGTTTTTCCTCTTTGGATTTGAGGAAGATGAAGTTGATTCAGGTGCATCAAATCAGAAGAAGCTGAAGAAGAACTTGATTTCTCAGGAGATTGCCGAGACATTTTTAACCGTTCCGAGGGACTTTTGCTGCCCAATATCACTGGATTTAATGAAAGATCCAGTGACCATTTCCACAGGTCAGACTTACGACCGCAGTTCGATTACTAGATGGATGGAAGAAGGGCACAACAATTGTCCGAAAACGGGGCAAGTGCTCATTCATACTCGCCTGGCTCCCAACCGCGCGTTAAGGAATTTGATCGTGCAGTGGTGCATTGCCCATGGAGTTCCTTATGATCCACCAGAAGGGATGGATGCATCTGCAGAAAGTTATGCAATGGCTTCTCCCACACGGGCTGCACTAGAAGCCAACAGAGCAACAGCTATGATCCTTATCCAACAGTTATCCATTGGATCGCAAGATGCAAAGACAATTGCAGCACGTGAAATTCGTTTGTTGGCAAAAACAGGGAAAGAAAACCGGGCTTTCATTGCAGAAGCCGGTGCCATCCCCCATCTACAAACTCTACTGGCTTCTCAAAACCCAGTTGCACAGGAGAATTCTGTGACTGCTATGCTTAACCTCTCAATATATGACAAGAACAAAAGCTTGATTATGAGTGAGATAGGGTGTTTAGGAGCGATAACCAAAGTATTGAGGTTTGGACATAGTACAGAAGCACGGGAAAACGCTGCAGCTACGTTATTTAGCCTCTCTGCAGTTCATGACTACAAGAAGAGAATAGCAGAGGAGGATGGTGCAGTTGAAGCCTTGGCAGGGCTATTGAGAGATGGTACCCCAAGAGGAAAGAAAGATGCTGTAACAGCTTTGTTTAATCTCTCAACCCATACCGATAACTGCGTTCGGATGATAGAGGCCGGGGCAGTAACAGCTCTTGTAGGAGCATTGGGGAATGAAGGTGTTGCTGAGGAAGCAGCTGGTGCATTGGCCTTGATTGTTAGACAGCCCGTTGGCGCTGAAGCAGTCACCAAAGAGGAGAGAGCTGTGGGAGGATTGATAGCAATGATGCGATGTGGAACACCAAGAGGAAAAGAGAATGCAGTAGCAGCTTTGCTTGAGTTATGTCGAAGTGGTGGAGCTGCCACGACCGAGCAAGTGTTCAAGGCTCCCGCTTTGGCTGGCTTGCTCCAAACACTCCTATTTACCGGTACAAAGCGAGCACGAAGAAAGGCTGCTTCGCTAGCTAGAGTGTTCCAGAGATGTGAGCATGTCACAATGCATTACGGCGGATTGGGGGTTGGTTATGCCTATGCAAGTAACTCAGCTCCTAGTAGAGATTCAAGTTTTGCTAGTGAGGTATCTGTGCCGATATCCATCTCGGTACCGGTCGTATAATCACGTTCGCCATTGTCTTATAGTCTTCAAGCTTTTTATATGGGTTCCCCAATTTTGTTCAAAAGGTTGACCGATTCTTTAATTGAGAATTAGAACGTAAGGATTATAGCACAACCATGTCCATATTTTATGAAACAATGGTTGCTATTAATCATGTAAACTACTCTTCATTTTAAATACTTGTATTGTATCCTTGCTGTGATAGAAAAATATTTATTGGCAAAAATGAAGTCTCTGTTACAAAATC 2906 43.5 MAAAAIFSSLRRRRSPSLEAFLAPVDLSDVALVQTLAIVATGLVSRFSEKSFFFQRRNSRSLIRKLEVCLVFLEFLKETDANLPHTALLCLKELYLLLYRSKILLDYCSESSKLWLLLQNHSISGHFNDLNLELLTFFDVFPLEEVELGVDVREQLELLQKQLRRTRMFVDEREEVLRTRFLSFLDEFENGRLPNPREMREFFVDKLKIRNAKSCRAEIEFLEEQIVNHEGDIEPTVAVLNGFVAFTRYSRFFLFGFEEDEVDSGASNQKKLKKNLISQEIAETFLTVPRDFCCPISLDLMKDPVTISTGQTYDRSSITRWMEEGHNNCPKTGQVLIHTRLAPNRALRNLIVQWCIAHGVPYDPPEGMDASAESYAMASPTRAALEANRATAMILIQQLSIGSQDAKTIAAREIRLLAKTGKENRAFIAEAGAIPHLQTLLASQNPVAQENSVTAMLNLSIYDKNKSLIMSEIGCLGAITKVLRFGHSTEARENAAATLFSLSAVHDYKKRIAEEDGAVEALAGLLRDGTPRGKKDAVTALFNLSTHTDNCVRMIEAGAVTALVGALGNEGVAEEAAGALALIVRQPVGAEAVTKEERAVGGLIAMMRCGTPRGKENAVAALLELCRSGGAATTEQVFKAPALAGLLQTLLFTGTKRARRKAASLARVFQRCEHVTMHYGGLGVGYAYASNSAPSRDSSFASEVSVPISISVPVV 715
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 61636478 61639383 - XM_039038606.1 Bhi08g02151 42484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi08g02151 715 SMART Ubox_2 291 354 IPR003613 GO:0004842|GO:0016567
Bhi08g02151 715 SMART arm_5 547 585 IPR000225 GO:0005515
Bhi08g02151 715 SMART arm_5 421 461 IPR000225 GO:0005515
Bhi08g02151 715 SMART arm_5 506 546 IPR000225 GO:0005515
Bhi08g02151 715 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 517 559 IPR000225 GO:0005515
Bhi08g02151 715 ProSiteProfiles U-box domain profile. 287 361 IPR003613 GO:0004842|GO:0016567
Bhi08g02151 715 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 267 360 IPR013083 -
Bhi08g02151 715 Gene3D - 387 666 IPR011989 -
Bhi08g02151 715 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 17 11 696 - -
Bhi08g02151 715 SUPERFAMILY RING/U-box 277 362 - -
Bhi08g02151 715 Coils Coil 212 232 - -
Bhi08g02151 715 Pfam Armadillo/beta-catenin-like repeat 422 460 IPR000225 GO:0005515
Bhi08g02151 715 CDD RING-Ubox_PUB 292 334 IPR045210 -
Bhi08g02151 715 SUPERFAMILY ARM repeat 394 669 IPR016024 -
Bhi08g02151 715 Pfam U-box domain 288 358 IPR003613 GO:0004842|GO:0016567
Bhi08g02151 715 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 432 474 IPR000225 GO:0005515
Bhi08g02151 715 PANTHER U BOX DOMAIN-CONTAINING 11 696 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi03g02213 Bhi-Chr3:48472114 Bhi08g02151 Bhi-Chr8:61636478 6.70E-135 dispersed
Bhi04g02290 Bhi-Chr4:62916660 Bhi08g02151 Bhi-Chr8:61636478 2.37E-126 dispersed
Bhi08g01590 Bhi-Chr8:45594440 Bhi08g02151 Bhi-Chr8:61636478 2.16E-97 dispersed
Bhi08g02151 Bhi-Chr8:61636478 Bhi10g00688 Bhi-Chr10:15015352 1.22E-97 dispersed
Bhi08g02151 Bhi-Chr8:61636478 Bhi10g00687 Bhi-Chr10:15015036 1.22E-97 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi08g02151 - - csv:101204151 1244.18