Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi08g02162 ATGAACTCAACGGTTAACCAATCCATGAATCAACAGTAGCCAAGTTTTGATTTTTTTCCGCCAATAGTTTTCTTTCTATTGATCATTTCATAGGTCTAGTTCGAAAGAAGAAGATTCACACTCTAGTAAGGAGCGCACTTCAATTAGAAGATTCACAGACTAGAGTTGCTTGCGTTTGTGGGGTTACTTTCTAGTTTCTCCTGCAGCGGTTTGGTTTGGTGCACAATTGTCTGTTAGTAGTTCAAATCAAAGACATGGGTGAAACCAACTTCCCAACCTCTCATCTTTCCAACTACTACCCTCCATTTCCCCCCATTTCTAAAATGCTTTCACCCCTCTTCTCGCACAGATTGATACGACCCATCTGGGTTCTGCGTATTCCATTTAAAATCACCTCCAAACCCTGGATTTAGGGGCTTCGAGGACCAAAGCTTTGATTTGGGTTTGGAGAAAGGGCAAGTGAGAAACAGGATGATGGTTTCTGATATTCCCATTTGCCACACTTGTGGTGAACCAGTCGGAGTTGATGGCAATGGCGAGGTTTTCGTTGCTTGCCATGAGTGCCATTTTCCTATTTGTAGAGTCTGCGTTCAATATGATATTAAGGAAGGCCGAAATGTTTGCTTGCGGTGTGGCTCTCCATTTGACGAGAACTTGCTGATGGATGCTGATACAAAGAGATCAGGAGATCGAAACACAATGGCATCTCATCTCAGTCATTCTGAGGACGTTGGAGTTCATGCTAGACATGTCAGTAGTGTGTCGACAGTGGATAGTGAATTGAATGATGAATCTGGGAACCCAATTTGGAAGAACAGAGTAGAGAGTTGGAAGGATAAGAAGAATAAAAAGAAACGGCCTACCGTGAAGACTGAACAGGAAGCTCAAATTCCTGTCCATCAGCAAATGGAAGAGAAACAGATTTCAGGGGAGGCTGGGGTTACACACTCATTTTCTTCAGTTTATCCAATTCCTTCCAGCAGATTAACACCGTACAGAATTGTGATAATCATGCGATTGATCATTCTAGCTCTTTTCTTTCAGTATCGAATAACCAATCCTGTTGATAGTGCTTTTGGTCTATGGCTCACTTCTATCATATGCGAAATCTGGTTCGCCTTCTCCTGGGTGTTGGATCAGTTCCCTAAATGGTTTCCCGTCTGCAGAGACACATTCATTGACAGATTATCAGCCAGGTTTGAAAGAGAGGGAGAACCTTCCCAGCTTGCTGCTGTGGATTTTTTTGTGAGTACTGTTGATCCATTGAAAGAACCTCCACTAATCACTGCCAATACCGTGCTTTCAATCCTTGCTGTGGACTATCCTGTTGATAAAGTCTCCTGCTACGTGTCTGACGATGGTGCAGCTATGCTTTCATTTGAGTCTCTAGTTGAAACAGCTGACTTTGCAAGAAAGTGGGTTCCATTCTGCAAGAAATTCTCCATTGAACCCCGAGCTCCTGAGTTTTACTTCTCTCAGAAAATAGACTATTTGAAAGATAAAGTGCAACCTTCTTTTGTCAAGGAACGTAGAGCAATGAAAAGAGCTTATGAAGAGTTTAAAGTACGAGTTAATGCTTTGGTAGCGAAGGCTCAGAAAACGCCTGATGAAGGCTGGTCCATGCAAGATGGAACAGCTTGGCCAGGAAATAACCCACGTGACCACCCTGGAATGATTCAGGTTTTTCTTGGAAATACTGGCGCCCATGACATAGAGGGCAATGAACTCCCTCGACTAGTCTATGTGTCCAGAGAGAAGAGGCCTGGTTACCAACATCACAAAAAAGCTGGTGCTGAAAATGCTCTGGTGAGAGTATCTGCAGTCCTCACAAACGCCCCCTTCATTCTCAACCTTGACTGTGATCACTATGTTAACAATAGCCAAGCTATACGTGAGGCAATGTGTTTCTTGATGGACCCACAAGTAGGCCGAGATGTATGCTATGTTCAATTTCCTCAGAGGTTTGATGGCATTGATCGAAGTGATCGATATGCCAATCGTAACACAGTTTTCTTTGATGTGAACATGAAAGGATTGGATGGCATCCAGGGACCAGTTTACGTGGGTACAGGTTGCGTTTTCAATAGACAGGCTCTTTATGGCTACGGACCTCCTACTCTGCCTAGCATATCTAAGACATCCTCATCATCCTGCTCTTGGTGTGGCTGCTGCTCGTGCTGCTGTCCTTCCAATAAGATCTCAAAAGATCCGACTGAGATTCAGAGAGATGCAAAAAGAGAAGAGCTTGATGCTGCAATCTTTAATCTCAGGGAAATAGATAATTATGATGAATACGAGAGGTCAATGCTAATTTCTCAATTAAGCTTTGAGAAAACTTTTGGCTTATCTTCTGTATTTATTGAGTCTACACTAATGGAAAATGGAGGAGTTGCAGAATCTGTAAATCCATCTACTTTGATTAAAGAAGCAATTCATGTCATTGGCTGTGGTTATGAAGAGAAGACTGCCTGGGGAAAAGAGATTGGTTGGATATACGGTTCAGTCACTGAGGATATCTTAACGGGTTTCAAGATGCATTGCCGAGGATGGAGGTCCATCTACTGCATGCCCGTGAGGCCAGCATTCAAAGGATCGGCACCGATTAATCTTTCCGATCGTCTGCACCAAGTTCTTCGATGGGCACTTGGATCTGTTGAGATTTTTCTCAGTAGACATTGTCCATTATGGTATGGATTCGCAGGTGGTCGGCTCAAATGGCTCCAAAGAATGGCATACATAAACACCATTGTCTATCCGTTCACCTCCCTCCCTCTAATTGCCTACTGTTCATTGCCTGCAATCTGCCTGCTGACTGGAAAATTTATCATACCAACGCTCTCAAACCTAGCAAGTACCCTTTTTCTTGGTCTCTTCTTGTCCATCATTCTCACAAGTGTCCTTGAGCTGCGTTGGAGTGGTGTGAGCATCGAAGATATATGGCGTAATGAGCAATTTTGGGTCATAGGAGGCGTCTCAGCCCATCTCTTTGCTGTCTTCCAAGGGTTCCTCAAGATGTTAGCTGGCGTAGACACCAACTTCACAGTTACTGCAAAGGCAGCTGACGACACTGAGTTCGGAGAGCTTTATATGGTGAAATGGACAACACTTTTGATCCCTCCTACAACACTTATCGTCATTAACATGGTCGGTGTTGTTGCTGGATTTTCTGATGCATTAAATGGTGGATATGAAGCTTGGGGACCTCTTTTTGGCAAGGTCTTTTTTGCCTTCTGGGTGATTTTTCATCTCTATCCATTCCTCAAAGGTCTCATGGGTCGCCAAAACCGGACTCCAACCATTGTTGTTCTATGGTCAGTACTGTTAGCATCAGTTTTCTCACTTGTTTGGGTGAAGATAAACCCATTTGTGAACCAAGTTGACAGTACAACCGTTGCACAAAGCTGCATTGCCATAGATTGTTGAGCAATATTGAAGAAATTTATCAAAAACCTTCAATTGCTTGTCAAAGACTCTGCTGTGATTGTTTATAGGATTAATTACTGGTTCCTTTATGTCATAGTTTGAGATGAAAATATACAGATTCATCTGAATATGTATGAATGTTTTGTTTAAACATTTGAGATTCAGTTTGTACAATGCAAGTGATTCTTGTGAGAAATACCAATTTGAATTCAATAGCTA 3642 42.7 MMVSDIPICHTCGEPVGVDGNGEVFVACHECHFPICRVCVQYDIKEGRNVCLRCGSPFDENLLMDADTKRSGDRNTMASHLSHSEDVGVHARHVSSVSTVDSELNDESGNPIWKNRVESWKDKKNKKKRPTVKTEQEAQIPVHQQMEEKQISGEAGVTHSFSSVYPIPSSRLTPYRIVIIMRLIILALFFQYRITNPVDSAFGLWLTSIICEIWFAFSWVLDQFPKWFPVCRDTFIDRLSARFEREGEPSQLAAVDFFVSTVDPLKEPPLITANTVLSILAVDYPVDKVSCYVSDDGAAMLSFESLVETADFARKWVPFCKKFSIEPRAPEFYFSQKIDYLKDKVQPSFVKERRAMKRAYEEFKVRVNALVAKAQKTPDEGWSMQDGTAWPGNNPRDHPGMIQVFLGNTGAHDIEGNELPRLVYVSREKRPGYQHHKKAGAENALVRVSAVLTNAPFILNLDCDHYVNNSQAIREAMCFLMDPQVGRDVCYVQFPQRFDGIDRSDRYANRNTVFFDVNMKGLDGIQGPVYVGTGCVFNRQALYGYGPPTLPSISKTSSSSCSWCGCCSCCCPSNKISKDPTEIQRDAKREELDAAIFNLREIDNYDEYERSMLISQLSFEKTFGLSSVFIESTLMENGGVAESVNPSTLIKEAIHVIGCGYEEKTAWGKEIGWIYGSVTEDILTGFKMHCRGWRSIYCMPVRPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPLWYGFAGGRLKWLQRMAYINTIVYPFTSLPLIAYCSLPAICLLTGKFIIPTLSNLASTLFLGLFLSIILTSVLELRWSGVSIEDIWRNEQFWVIGGVSAHLFAVFQGFLKMLAGVDTNFTVTAKAADDTEFGELYMVKWTTLLIPPTTLIVINMVGVVAGFSDALNGGYEAWGPLFGKVFFAFWVIFHLYPFLKGLMGRQNRTPTIVVLWSVLLASVFSLVWVKINPFVNQVDSTTVAQSCIAIDC 983
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 61959191 61965927 + XM_039039688.1 Bhi08g02162 42495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi08g02162 983 Pfam Cellulose synthase 255 973 IPR005150 GO:0016020|GO:0016760|GO:0030244
Bhi08g02162 983 SUPERFAMILY RING/U-box 3 72 - -
Bhi08g02162 983 Pfam Zinc-binding RING-finger 7 58 IPR027934 -
Bhi08g02162 983 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 80 IPR013083 -
Bhi08g02162 983 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 407 548 IPR029044 -
Bhi08g02162 983 SUPERFAMILY Nucleotide-diphospho-sugar transferases 269 781 IPR029044 -
Bhi08g02162 983 ProSiteProfiles 4Fe-4S ferredoxin-type iron-sulfur binding domain profile. 552 581 IPR017896 -
Bhi08g02162 983 PANTHER CELLULOSE SYNTHASE A CATALYTIC SUBUNIT 8 [UDP-FORMING] 2 983 - -
Bhi08g02162 983 MobiDBLite consensus disorder prediction 122 145 - -
Bhi08g02162 983 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 2 983 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi08g02162 Bhi-Chr8:61959191 Bhi12g02350 Bhi-Chr12:74576499 0 dispersed
Bhi08g02161 Bhi-Chr8:61959191 Bhi08g02162 Bhi-Chr8:61959191 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi08g02162 K10999 - csv:101208988 1942.16