Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi08g02260 ATGCTCTCTTCCATGGCAGCTGTCGCTGGGTCTGAGCAGGAGGGGCTCTGAAACAAAGCTCTCATCCTTTCTTCTTCCCTGAAAACTCCTCCTTCCCCCTTTCCCCTTTTTCCCTTCATATATTCATCTTCTTCCTCAAACCCTAAACCCTTCCATTTCTACTCACGGAGAAGCACCAACAATGCTTCTTAACCCCCTCTTCCTCCTCTTCTTTTTCTTCTTAATCTTCCTCTCAAACCCTTCTCTTCTCTCCTTCTCTCTAACACAAGAAGGTCTCTATCTTCACACCATCAAGCTCTCTCTCGACGACCCAGATTCCTCTCTCCGCTCATGGAACGACCGCGACGACACTCCCTGTTCCTGGTTTGGCGTCTCTTGCGACCCTCAAACCAACTCCGTCCACTCTCTCGACCTCTCTAACACCAACATCGCCGGCCCATTTCCTTCCCTCCTTTGCCGTCTCCAGAATCTCTCATTCCTCTCCCTTTACAACAATTCCATCAACATGTCCCTTCCCTCTGCTATTTCCGACTGTACCAGTCTCCACTATCTCGACCTCTCCCAGAATCTCCTCACCGGCGCGCTTCCGAGCTCGATTTCTGATCTCCCCAACCTTCGTTACTTGGATTTGACAGGGAATAACTTCTCCGGCGACATTCCGGAGAGTTTCGCCCGGTTTCGGAAGTTGGAAGTTCTGTCTCTTGTTTATAATCTTCTCGATGGGCCTATGCCGGCGTTTCTCGGCAACATTACGTCGTTGAAGATGTTGAACCTGTCTTATAACCCGTTTGTGCCGAGCCGGATCCCATCGGAGTTTGGGAATTTGACGAATCTTGAGGTGCTCTGGTTGACTCAGTGTAATTTGGTTGGGCAAATTCCGGAGTCTCTTGGTCGGTTGAAGCGGCTTACTGACTTGGACTTGGCGTTGAATAATCTTGATGGGCCGATTCCGAAGTCGCTAATGGAGTTGAGTAGTGTGGTTCAGATTGAGTTGTATAATAACTCGTTAACGGGTGAGTTGCCTTCTGGGTTTTCGAATCTGACTTCATTACGACTGTTTGACGCTTCGATGAATGGTTTGACTGGGGTGATTCCGAATGAGTTGTGTCAATTGCCGCTTGAGAGTCTCAATCTCTATGAGAACAAGTTTGAAGGGAAGTTACCGGAAAGCATTGCCAACTCGCCGGGTTTGTACGAACTCAGACTGTTCAGTAACCGGCTCACTGGCGAGTTACCGCGAAATCTTGGAAAGAACTCGCCGATGAGATGGATGGATGTTTCTAACAACCAGTTTTCGGGTGAAATCCCGGGGAATTTGTGTGAGAAGGGAGAGTTAGAGGAGCTTCTCATGATCAACAACCAGTTTTCCGGCGAGATCCCGGCGAGTTTGGGTTCGTGCGAGAGTCTTACGAGGGTGCGATTGGGTTATAATCAGTTTTCCGGCGAGGTACCGGCGGGATTTTGGGGGCTCCCACATGTGTATCTGTTAGAACTGGTGAGTAACTCGCTTTCTGGGAAGATTTCTGATGCCATTGCCACTGCTAAGAACCTTTCGATTTTCATTATCTCTAAGAACAACTTTACTGGCACGTTACCGGCGGAGATCGGACGGCTGGAAAATCTTGTGAAGTTGCTAGCGACGGATAACAAACTTACTGGATCATTACCAGGGAGTCTTGTGAATCTTAGGCATCTTTCGAGTTTAGATCTTCGGAATAATGAACTCTCTGGGGAACTTCCCAGTGGAATCAAATCGTGGAAGAATCTCAACGAACTCAATTTAGCAAACAATGGATTCACCGGCGAAATCCCTGAAGAAATCGGAAACTTGCCTGTTCTTAATTACCTTGATCTGTCTGGAAATCTGTTTTCTGGGGATATCCCTCTTGGGTTACAGAATTTGAAACTCAATCTTCTCAATTTATCTAACAATCGCTTGTCAGGTGAGCTTCCTCCATTTTTAGCTAAGGAAATCTACAGAAATAGCTTTTTGGGGAATCCAGATTTGTGTGGACATTTTGAAAGTTTGTGCAACAGCAAAGGTGAAGCTAAAAGCCAAGGCTCTCTCTGGTTGTTGCGATCCATCTTTGTTCTTGCCGCTATTGTGTTTATCGTCGGTGTCATCTGGTTTTACCTCAAATACAGGAAGTTTAAGATGGCAAAGAAAGAAATGGAGAAGAGCAAATGGACATTGATGTCCTTCCACAAGTTGGATTTCAGTGAATACGAGATCTTGGATTGTCTTGATGAAGATAACATCATAGGTAGTGGATCTTCTGGTAAAGTTTACAAAGTTGTGCTTAACAATGGTGAGGCTGTTGCAGTGAAGAAACTGTTTGGAGGGATGAGGAAAGAAGGCGAAAAAGGCGATATCGAGAAGGGTCAAGTTCAAGACAATGCCTTCGAAGCCGAAATCGATACTTTGGGAAAGATTAGGCACAAAAACATTGTGAAGTTATGGTGCTGCTGTGTTACAAGAGACTACAAGCTTTTAGTCTATGAATATATGCCTAATGGAAGCTTGGGAGAGTTGCTTCATAGTAGTAAAAAAGGGCTGCTTGATTGGCCTACTAGGTTTAAGATAGCTTTAGATGCCGCAGAAGGACTTTCTTATCTTCATCATGATTGCGTCCCTCCGATCGTACATCGAGACGTTAAGTCAAACAATATCTTGTTGGATGGTGATTTCGGAGCACGGTTAGCCGATTTCGGTGTAGCTAAAGTCATCGATTCAACCGGGAAAGGACCTAAATCCATGTCAGTTATCGCAGGATCTTGCGGTTACATTGCACCTGAGTATGCTTATACACTCCGAGTGAATGAAAAAAGCGATATATACAGTTTTGGCGTGGTGATCCTCGAGCTAATAACTGGGAGGCTCCCGATCGATCCAGAGTTTGGGGAGAAGGACTTGGTGAAATGGGTGTGTTTCACATTAGATCAAGACGGGATCGATCAAGTGATAGACCGGAAACTGGATAGCTGTTTCAAGGAAGAAATATGCAGAGTCCTTAACATTGGGCTGCTATGCACCAGCCCTCTTCCCATAAACAGGCCATCGATGAGAAAGGTGGTGAAAATGCTGCAAGAAGTTGGGGCAGAGAATCAATTGAAAAGCAACAGTAAAGATGGAAAGTTAACTCCATACTATTATGAAGATGCATCAGATCAGGGAAGTGTAGCTTAGAACAAAACACAGTTTGATTGCATAAAAGAAGAAAGCTTTCAGTTTATACAAAATTTTCTTTTAAGTTTTTCAACTCAACTCCATATTCCCGCTGGTTTGGTGTTCTTTTTAAATGGAAAAGAAAGAATTCAGGTGGATGACTATGAGAAGATGCCAAAAATAGCAGCATTGTTGACAGCAATTTATATGTAAATTTGTTTGCTTTGCTGATGATATTCAAACTGTTTAATTGTTCTCTTTTTTTTTTTCTAACACTAATGTAGTGTAATTTTATATATATATGTAGTTTAAGAAAA 3483 44.1 MLLNPLFLLFFFFLIFLSNPSLLSFSLTQEGLYLHTIKLSLDDPDSSLRSWNDRDDTPCSWFGVSCDPQTNSVHSLDLSNTNIAGPFPSLLCRLQNLSFLSLYNNSINMSLPSAISDCTSLHYLDLSQNLLTGALPSSISDLPNLRYLDLTGNNFSGDIPESFARFRKLEVLSLVYNLLDGPMPAFLGNITSLKMLNLSYNPFVPSRIPSEFGNLTNLEVLWLTQCNLVGQIPESLGRLKRLTDLDLALNNLDGPIPKSLMELSSVVQIELYNNSLTGELPSGFSNLTSLRLFDASMNGLTGVIPNELCQLPLESLNLYENKFEGKLPESIANSPGLYELRLFSNRLTGELPRNLGKNSPMRWMDVSNNQFSGEIPGNLCEKGELEELLMINNQFSGEIPASLGSCESLTRVRLGYNQFSGEVPAGFWGLPHVYLLELVSNSLSGKISDAIATAKNLSIFIISKNNFTGTLPAEIGRLENLVKLLATDNKLTGSLPGSLVNLRHLSSLDLRNNELSGELPSGIKSWKNLNELNLANNGFTGEIPEEIGNLPVLNYLDLSGNLFSGDIPLGLQNLKLNLLNLSNNRLSGELPPFLAKEIYRNSFLGNPDLCGHFESLCNSKGEAKSQGSLWLLRSIFVLAAIVFIVGVIWFYLKYRKFKMAKKEMEKSKWTLMSFHKLDFSEYEILDCLDEDNIIGSGSSGKVYKVVLNNGEAVAVKKLFGGMRKEGEKGDIEKGQVQDNAFEAEIDTLGKIRHKNIVKLWCCCVTRDYKLLVYEYMPNGSLGELLHSSKKGLLDWPTRFKIALDAAEGLSYLHHDCVPPIVHRDVKSNNILLDGDFGARLADFGVAKVIDSTGKGPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELITGRLPIDPEFGEKDLVKWVCFTLDQDGIDQVIDRKLDSCFKEEICRVLNIGLLCTSPLPINRPSMRKVVKMLQEVGAENQLKSNSKDGKLTPYYYEDASDQGSVA 1001
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 64514596 64518169 - XM_039038453.1 Bhi08g02260 42593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi08g02260 1001 PANTHER RECEPTOR-LIKE PROTEIN KINASE HSL1 13 981 - -
Bhi08g02260 1001 SUPERFAMILY RNI-like 280 604 - -
Bhi08g02260 1001 SMART LRR_sd22_2 94 111 - -
Bhi08g02260 1001 SMART LRR_sd22_2 502 531 - -
Bhi08g02260 1001 SMART LRR_sd22_2 239 265 - -
Bhi08g02260 1001 SMART LRR_sd22_2 118 144 - -
Bhi08g02260 1001 ProSitePatterns Serine/Threonine protein kinases active-site signature. 820 832 IPR008271 GO:0004672|GO:0006468
Bhi08g02260 1001 Gene3D Transferase(Phosphotransferase) domain 1 776 994 - -
Bhi08g02260 1001 Pfam Protein kinase domain 690 908 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi08g02260 1001 MobiDBLite consensus disorder prediction 979 1001 - -
Bhi08g02260 1001 Gene3D Ribonuclease Inhibitor 186 266 IPR032675 -
Bhi08g02260 1001 SUPERFAMILY Protein kinase-like (PK-like) 679 968 IPR011009 -
Bhi08g02260 1001 ProSitePatterns Protein kinases ATP-binding region signature. 694 717 IPR017441 GO:0005524
Bhi08g02260 1001 Gene3D Ribonuclease Inhibitor 27 185 IPR032675 -
Bhi08g02260 1001 Pfam Leucine rich repeat N-terminal domain 29 67 IPR013210 -
Bhi08g02260 1001 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 13 981 - -
Bhi08g02260 1001 Gene3D Phosphorylase Kinase; domain 1 652 775 - -
Bhi08g02260 1001 ProSiteProfiles Protein kinase domain profile. 688 971 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi08g02260 1001 Gene3D Ribonuclease Inhibitor 267 334 IPR032675 -
Bhi08g02260 1001 Gene3D Ribonuclease Inhibitor 335 620 IPR032675 -
Bhi08g02260 1001 SUPERFAMILY L domain-like 37 376 - -
Bhi08g02260 1001 SMART LRR_typ_2 142 165 IPR003591 -
Bhi08g02260 1001 SMART LRR_typ_2 215 239 IPR003591 -
Bhi08g02260 1001 SMART LRR_typ_2 550 573 IPR003591 -
Bhi08g02260 1001 SMART LRR_typ_2 502 525 IPR003591 -
Bhi08g02260 1001 SMART LRR_typ_2 190 214 IPR003591 -
Bhi08g02260 1001 SMART LRR_typ_2 94 118 IPR003591 -
Bhi08g02260 1001 SMART serkin_6 688 954 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bhi08g02260 1001 Pfam Leucine rich repeat 120 179 IPR001611 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi02g01956 Bhi-Chr2:52850225 Bhi08g02260 Bhi-Chr8:64514596 0 dispersed
Bhi04g00874 Bhi-Chr4:21995166 Bhi08g02260 Bhi-Chr8:64514596 0 dispersed
Bhi08g02260 Bhi-Chr8:64514596 Bhi09g02545 Bhi-Chr9:69131094 0 dispersed
Bhi09g02546 Bhi-Chr9:69210818 Bhi08g02260 Bhi-Chr8:64514596 0 dispersed
Bhi03g02632 Bhi-Chr3:64691240 Bhi08g02260 Bhi-Chr8:64514596 2.25E-146 transposed
Bhi05g01394 Bhi-Chr5:48968817 Bhi08g02260 Bhi-Chr8:64514596 0 transposed
Bhi06g01858 Bhi-Chr6:52165017 Bhi08g02260 Bhi-Chr8:64514596 4.20E-137 transposed
Bhi09g02075 Bhi-Chr9:59307520 Bhi08g02260 Bhi-Chr8:64514596 0 transposed
Bhi11g00783 Bhi-Chr11:21296001 Bhi08g02260 Bhi-Chr8:64514596 0 transposed
Bhi11g00870 Bhi-Chr11:26378257 Bhi08g02260 Bhi-Chr8:64514596 0 transposed
Bhi11g00871 Bhi-Chr11:26623886 Bhi08g02260 Bhi-Chr8:64514596 0 transposed
Bhi03g00362 Bhi-Chr3:7574943 Bhi08g02260 Bhi-Chr8:64514596 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88055 PF00069 Pkinase 4.30E-43 CL0016 Bhi PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi08g02260 - - csv:101213542 1854.34