Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi08g02272 ACCCACCTCTTCTCAATTTCACACAACCAAAATTCCCCTTTTCTTCTTCCTTCTCTCTCTCTCTTTTCCCTCTTTTCCTCTTTCCTTGATTCTTCCATGGCTTCCACTCGCGAAGGCCACTACAGAGGCGTTCGTAAGAGGCCATGGGGTCGTTACGCCGCTGAAATACGCGATCCTTGGAAGAAAACCCGCGTCTGGTTAGGCACTTTCGATACTCCTGAAGAAGCCGCCCTTGCTTACGACGGCGCCGCCAGATCCCTCCGCGGCTCCAAAGCTAAAACCAACTTCCCTCCTCCCGTCCCTGGTCTCTCTCTCGACCTCAACGTCTCCAGTCCCTGGCCAACCGTCACCTCCGCGGCCGCTGCCCCTTCCTCTTCCGCTCGCTTTCTCCTCGGCGATTTCCTCCGCCATGGCGCCAGAAACGATATGTGTAATCTCAATGCGGAAGCCTCCCCGGTACTGCTGGACTCGAGCGCTGCTTCAACAGCCACAGCTACGACGTCGTTTATTGGTCACGTGCGGCGCGGCCTCCCTTTTGATCTAAATGAACCTCCCCCGGTGTGGCTATGATTCATTCAACAAAACCACCCCACGGCTTTTTACCGGCGTTTTTTACGGACATCACTTTCTCATTTCCTTCTTTTTGTCTTTCTCTTTTATTTATTTTTATTTTTAACAGTCTTATGTATCCACTTTTCACCCCCCCTAGATTTTAAAAAAAAAAAAAAAAAAAAAAAAAACATTAAAAAAAATATGTAAATACAAGTTTTTGGTGGACATTGATTGGTCTATTCCACATTTTCTTTTTTATATATTATTTATCGAAAATCCTAAAATGATGCCGGCCGCCGCCCGCGGAAAATATTGCTTCCATCGGACTTATAATAATAATAATAATAAGGGTGTTTTCTTTCGAGGTATTTTTAGTCACGCGCCAAAAGCGTGAGATTTTGTTTTAAGTTTTTATGAGGCGAAACATTATGAAAAGTGAATTATTTGTATTGTAATTAAAAATGGTCAAGGAGTTAACAAGAAACGACGTCGTATAGGAAGGGAATGAAAAAGGAAGGGCAAGCGTGTGCACTTTATAATAATTGCATTCCTTTCTTGGTTTCCTTTGCTTCGTACGTCTGCTTTTGCGGTTTCGGCAATTTCAGCACCCCATTTATTCTTCCATTTTTAGCCTTCTCTTTCTTCTTCCACGCGCCCTTCCTCCGCGCGTTTGTTCCAACTCCTTGTTAATCTCCGGCTAAACTGGCCCCACGCCCGCCGTTTACCATTTTCTTTTTCTCAATAATCATTAATATATTTACTTCAAGTTTTGGCCAA 1329 44.39 MASTREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGSKAKTNFPPPVPGLSLDLNVSSPWPTVTSAAAAPSSSARFLLGDFLRHGARNDMCNLNAEASPVLLDSSAASTATATTSFIGHVRRGLPFDLNEPPPVWL 157
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 64862465 64863793 - XM_039039179.1 Bhi08g02272 42605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi08g02272 157 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 1 145 - -
Bhi08g02272 157 Pfam AP2 domain 8 57 IPR001471 GO:0003700|GO:0006355
Bhi08g02272 157 PRINTS Ethylene responsive element binding protein signature 9 20 IPR001471 GO:0003700|GO:0006355
Bhi08g02272 157 PRINTS Ethylene responsive element binding protein signature 31 47 IPR001471 GO:0003700|GO:0006355
Bhi08g02272 157 ProSiteProfiles AP2/ERF domain profile. 8 65 IPR001471 GO:0003700|GO:0006355
Bhi08g02272 157 SUPERFAMILY DNA-binding domain 8 66 IPR016177 GO:0003677
Bhi08g02272 157 SMART rav1_2 8 71 IPR001471 GO:0003700|GO:0006355
Bhi08g02272 157 CDD AP2 8 65 IPR001471 GO:0003700|GO:0006355
Bhi08g02272 157 Gene3D AP2/ERF domain 8 66 IPR036955 GO:0003700|GO:0006355
Bhi08g02272 157 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 12-LIKE 1 145 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bhi03g00387 Bhi08g02272 CCT
Bhi03g00387 Bhi08g02272 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi08g02272 Bhi-Chr8:64862465 Bhi10g01055 Bhi-Chr10:21193586 6.74E-32 dispersed
Bhi08g02269 Bhi-Chr8:64765202 Bhi08g02272 Bhi-Chr8:64862465 1.17E-31 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
1785 PF00847 AP2 1.50E-14 CL0081 Bhi TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi08g02272 - - csv:101212815 263.848