Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g00028 CTACACTCGTGGATTGAATTTTCTTTCTGTAATTTGGTTGCGTTGCCGATTTGTAGTGTGTTTTTTCACTCAGAGTTTTTGGTTGACTTTTGATTGTGATTTCGATTACGTTTTCTGATCTGTGGATGGAGCTGAATTTGAGGCAATTCCGAAAATTAAAACCACTTGGATTTTGTTCTGAATCGACTATGAATGGTTTCCTCTGCATCTGTCTGACATGTCTTGCTTTTGTGATGAATTGTTAAACTAGCAGTGCGACGTTGCCTTGTGCATCGTATCGTAATTGCATCTCCTGGCGTCTGTATGAGTCAAAAATTTTCTTTCCTGGTATCTATCATACTTATTGGCTGGATACAATGGTGAAACTCCCCTGCGTTCAACTAAAATGTCATAGATTCAGAAGCATGTTATTTCAGTTATTTGAGATTCTACATGTTAAAGCAAAACTTTGAGGAGGCTGTTGGAATTGGCAAAGGACAAACCAAACTATATGCGACTATAGATTTAGAAAAGGCTAGGGTTGGGAGGACACGGATATTGGAAACTGAACCCTCTAATCCAAGATGGTACGAATCTTTTCACATTTACTGTGCCCATAAGGCATCAAATGTTATCTTCACCGTGAAGGATGATAATCCCATTGGTGCAACTTTGATTGGACGTGCATATGTACCTGTGGAAGACATCTTAGATGGGGAGGAAGTTGACAGATGGGTTCCAATCTTAGATGAAGAGAAAAATCCAATTGAAGGAGAATCGAAGATTCATGTTAAGCTTCAGTACTTCAGTGTTACGAAAGATCGCAATTGGGGTTGTGGTATAAGAAGTCGTAAATTTCCTGGAGTCCCTTATACATACTATTCACAGAGACAAGGTTGTAAGGTCTCTTTGTATCAAGATGCTCATATCCCCGATAATTTTATTCCTAAAATTCCTCTTGCTGGAGGAAAAAATTATGCTCCCGCCAGATGTTGGGAAGATATTTTTGATGCCATACAAAATGCCAAACACGTGATCTACATCACAGGATGGTCTGTTTATACAGAAATTGCCTTGGTAAGGGACTCAAGGAGGCCAAAGCCTGGAGGAGACACCATGCTTGGTGAACTTCTCAAGAAGAAAGCAAGTGAAGGGGTCAGAGTTCTTATGCTTGTCTGGGATGACAGAACATCAGTCGGTTTACTAAAAAAAGATGGTCTGATGGCTACTCATGATGAAGAAACTGAACGTTACTTTCAAAATACTGATGTGCACTGTGTCTTGTGCCCTCGTAATCCTGATGATGGTGGAAGCATTGTTCAAGATCTACAAATCTCTACCATGTTCACTCATCACCAGAAGATTGTTGTAGTGGATAGCCCAATGCCAAGTGGAGATTCGGATAAGAGGAGAATTGTGAGTTTTGTTGGTGGCATTGATCTTTGTGATGGCAGGTATGACACACCCTTTCACTCCCTTTTCAGGACATTGGATACTGCACATCATGACGATTTCCATCAACCAAATTTTACTGGTGCATCAATAACAAAAGGAGGACCAAGGGAACCTTGGCATGACATCCATTCCCGGCTCGAAGGGCCCATCGCCTGGGATGTTTTGTTCAATTTTGAGCAAAGGTGGAAGAAACAAGGTGGGAAGGATGTACTTGTGCAGCTACGGGAGCTTGATGAAATAATTATTCCTCCATCTCCTGTTATGTACCCAGACGACCATGACACCTGGAATGTTCAGTTGTTTAGATCAATAGATGGTGGGGCAGCTTTTGGCTTTCCTGAGACCCCTGAAGATGCTGCTAGAGCTGGGCTTGTCAGCGGGAAAGATAACATTATTGATAGAAGCATTCAGGACGCTTACATTAATGCTATTCGGCGGGCTAAGAATTTTATTTATATTGAAAACCAATATTTCCTTGGAAGTTGTTTTGGATGGTCTCCTGATAATATCAAGCCTGAGGATATTGGTGCCTTGCACTGTATCCCAAGAGAGCTTTCCCTCAAGATCGTCAGTAAGATTAAAGCAGGGGAAAGGTTCACTGTCTATGTAGTTGTCCCAATGTGGCCAGAAGGTCTACCAGAAAGTGGATCAGTTCAGGCGATATTAGATTGGCAGAGGAGGACATTTGAAATGATGTATAAAGACGTGATCGAGGCTCTTAGAGATCAAGGTATCGAAGAAGACCCTCGCAACTACTTGACGTTCTTCTGTCTTGGGAACCGGGAAGTCAAGAGGGATGGAGAATATGAACCTTTAGAAGCACCAGAGGAAGATTCTGATTATATGAGAGCCCAGCAGGCCAGGCGTTTCATGATTTATGTTCACACCAAGATGATGATTGTTGATGATGAGTACATAATTGTTGGATCGGCAAATATCAACCAGAGATCCATGGATGGTGCAAGGGACTCTGAGATAGCAATGGGTGCTTATCAGCCATATCATCTGTCAGCCCGTGAACCTGCACGTGGTCAAGTTCACGGATTCCGTATGGCTCTATGGTATGAACATCTTGGTATGCTTGATGAAACTTTCCTTCGTCCAGAAAGTGAAGAATGTGTTGCAAAGGTTAACAGAATTGCTGATAAGTATTGGGATCTGTATTCAAGCGAATCACTCGAGAGAGACTTGCCCGGTCACCTTCTCCGCTATCCAGTTGGCATATCCAGTGAAGGAAAAGTCACAGAACTCCCAGGATTCGAGTTCTTCCCTGACACCAAAGCTCGTATACTCGGAACCAAATCCGACTACCTCCCTCCTATCCTCACTACTTAGTCATTTTTCTGCTGCGTGCAATCTTATTCCAACAGGTTCTTACTACTTACATCTTGTTTTTGTAACTTGAAAAGACGTTTTGAAAGGTTTGAGGTTTACTTAAATAGTGGCTAATGTCACTTTAGCTATGTTTCTTGATTGAGGCTTACTTCAAATACTCTGGCTAATGTAATTTTGGGTTGTGCCTTCTTAGTCTTGGGGGGTTTACTTTTATACAGGCTAATGTAACTTTGGCTGGATTTCTTGATGTTATAAACTTCAGTTTAATTTTCTCGTGGCA 3049 41.78 MLKQNFEEAVGIGKGQTKLYATIDLEKARVGRTRILETEPSNPRWYESFHIYCAHKASNVIFTVKDDNPIGATLIGRAYVPVEDILDGEEVDRWVPILDEEKNPIEGESKIHVKLQYFSVTKDRNWGCGIRSRKFPGVPYTYYSQRQGCKVSLYQDAHIPDNFIPKIPLAGGKNYAPARCWEDIFDAIQNAKHVIYITGWSVYTEIALVRDSRRPKPGGDTMLGELLKKKASEGVRVLMLVWDDRTSVGLLKKDGLMATHDEETERYFQNTDVHCVLCPRNPDDGGSIVQDLQISTMFTHHQKIVVVDSPMPSGDSDKRRIVSFVGGIDLCDGRYDTPFHSLFRTLDTAHHDDFHQPNFTGASITKGGPREPWHDIHSRLEGPIAWDVLFNFEQRWKKQGGKDVLVQLRELDEIIIPPSPVMYPDDHDTWNVQLFRSIDGGAAFGFPETPEDAARAGLVSGKDNIIDRSIQDAYINAIRRAKNFIYIENQYFLGSCFGWSPDNIKPEDIGALHCIPRELSLKIVSKIKAGERFTVYVVVPMWPEGLPESGSVQAILDWQRRTFEMMYKDVIEALRDQGIEEDPRNYLTFFCLGNREVKRDGEYEPLEAPEEDSDYMRAQQARRFMIYVHTKMMIVDDEYIIVGSANINQRSMDGARDSEIAMGAYQPYHLSAREPARGQVHGFRMALWYEHLGMLDETFLRPESEECVAKVNRIADKYWDLYSSESLERDLPGHLLRYPVGISSEGKVTELPGFEFFPDTKARILGTKSDYLPPILTT 778
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 528873 532829 - XM_039043303.1 Bhi09g00028 42645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g00028 778 Gene3D Endonuclease Chain A 450 668 - -
Bhi09g00028 778 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 296 334 IPR001736 GO:0003824
Bhi09g00028 778 Pfam Phospholipase D Active site motif 625 651 IPR001736 GO:0003824
Bhi09g00028 778 Pfam Phospholipase D Active site motif 296 334 IPR001736 GO:0003824
Bhi09g00028 778 CDD C2_plant_PLD 9 118 - -
Bhi09g00028 778 CDD PLDc_pPLDalpha_2 462 671 - -
Bhi09g00028 778 ProSiteProfiles C2 domain profile. 1 95 IPR000008 -
Bhi09g00028 778 Gene3D C2 domain 3 126 IPR035892 -
Bhi09g00028 778 Gene3D Endonuclease Chain A 170 412 - -
Bhi09g00028 778 SUPERFAMILY Phospholipase D/nuclease 121 411 - -
Bhi09g00028 778 PANTHER PHOSPHOLIPASE D 4 778 IPR015679 -
Bhi09g00028 778 PANTHER PHOSPHOLIPASE D 4 778 - -
Bhi09g00028 778 SUPERFAMILY Phospholipase D/nuclease 415 708 - -
Bhi09g00028 778 SMART C2_3c 1 94 IPR000008 -
Bhi09g00028 778 Pfam Phospholipase D C terminal 696 768 IPR024632 -
Bhi09g00028 778 Pfam C2 domain 14 97 IPR000008 -
Bhi09g00028 778 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 13 119 IPR035892 -
Bhi09g00028 778 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 624 651 IPR001736 GO:0003824
Bhi09g00028 778 PIRSF PLD_plant 2 778 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Bhi09g00028 778 SMART pld_4 296 334 IPR001736 GO:0003824
Bhi09g00028 778 SMART pld_4 624 651 IPR001736 GO:0003824
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bhi01g03551 Bhi09g00028 CCT
Bhi01g03551 Bhi09g00028 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi09g00028 Bhi-Chr9:528873 Bhi09g00030 Bhi-Chr9:528873 0 dispersed
Bhi09g00028 Bhi-Chr9:528873 Bhi09g00029 Bhi-Chr9:528873 0 tandem
Bhi01g03327 Bhi-Chr1:83793976 Bhi09g00028 Bhi-Chr9:528873 0 transposed
Bhi06g01452 Bhi-Chr6:44116780 Bhi09g00028 Bhi-Chr9:528873 1.06E-13 transposed
Bhi11g00355 Bhi-Chr11:8467626 Bhi09g00028 Bhi-Chr9:528873 0 transposed
Bhi01g03551 Bhi-Chr1:90338220 Bhi09g00028 Bhi-Chr9:528873 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g00028 K01115 - csv:101206113 1559.27