Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g00029 GTCTCTTGACTTTCTCTCATTCACACATTTCAATCGTTTCTTTTTCAATTCTAATCTTCCATTTTCTTTTTAAAAACATTTCAACTACAAAGCTCAAGATCAGATCAGATCAGATCTGATTTTCATTTTCATTTTCATTTCTTCATTCTTCTGTCCCACTCATTCCACTTTCACTACATATCTCTGCAAATCTAAGTTCGTTTTTTTACTCTCTATATCTCCTGTTTCTCTCTTCTTTCACTTCAATTCATCCATCAGGTTTCGTTTCTCAAGAAATCGCGTTGTTGGAGGTTCTATTACTCTGTGAGAATGGAAGGTAGTTCGCTTCATGGAACGCTTCACGCAACAATCTATGAAGTCGACAGGTTGCATATTGGTGGTGGATCCAATATCTTCAGCATGTTAAAGCAAAACTTTGAGGAGGCTGTTGGAATTGGCAAAGGACAAACCAAACTATATGCGACTATAGATTTAGAAAAGGCTAGGGTTGGGAGGACACGGATATTGGAAACTGAACCCTCTAATCCAAGATGGTACGAATCTTTTCACATTTACTGTGCCCATAAGGCATCAAATGTTATCTTCACCGTGAAGGATGATAATCCCATTGGTGCAACTTTGATTGGACGTGCATATGTACCTGTGGAAGACATCTTAGATGGGGAGGAAGTTGACAGATGGGTTCCAATCTTAGATGAAGAGAAAAATCCAATTGAAGGAGAATCGAAGATTCATGTTAAGCTTCAGTACTTCAGTGTTACGAAAGATCGCAATTGGGGTTGTGGTATAAGAAGTCGTAAATTTCCTGGAGTCCCTTATACATACTATTCACAGAGACAAGGTTGTAAGGTCTCTTTGTATCAAGATGCTCATATCCCCGATAATTTTATTCCTAAAATTCCTCTTGCTGGAGGAAAAAATTATGCTCCCGCCAGATGTTGGGAAGATATTTTTGATGCCATACAAAATGCCAAACACGTGATCTACATCACAGGATGGTCTGTTTATACAGAAATTGCCTTGGTAAGGGACTCAAGGAGGCCAAAGCCTGGAGGAGACACCATGCTTGGTGAACTTCTCAAGAAGAAAGCAAGTGAAGGGGTCAGAGTTCTTATGCTTGTCTGGGATGACAGAACATCAGTCGGTTTACTAAAAAAAGATGGTCTGATGGCTACTCATGATGAAGAAACTGAACGTTACTTTCAAAATACTGATGTGCACTGTGTCTTGTGCCCTCGTAATCCTGATGATGGTGGAAGCATTGTTCAAGATCTACAAATCTCTACCATGTTCACTCATCACCAGAAGATTGTTGTAGTGGATAGCCCAATGCCAAGTGGAGATTCGGATAAGAGGAGAATTGTGAGTTTTGTTGGTGGCATTGATCTTTGTGATGGCAGGTATGACACACCCTTTCACTCCCTTTTCAGGACATTGGATACTGCACATCATGACGATTTCCATCAACCAAATTTTACTGGTGCATCAATAACAAAAGGAGGACCAAGGGAACCTTGGCATGACATCCATTCCCGGCTCGAAGGGCCCATCGCCTGGGATGTTTTGTTCAATTTTGAGCAAAGGTGGAAGAAACAAGGTGGGAAGGATGTACTTGTGCAGCTACGGGAGCTTGATGAAATAATTATTCCTCCATCTCCTGTTATGTACCCAGACGACCATGACACCTGGAATGTTCAGTTGTTTAGATCAATAGATGGTGGGGCAGCTTTTGGCTTTCCTGAGACCCCTGAAGATGCTGCTAGAGCTGGGCTTGTCAGCGGGAAAGATAACATTATTGATAGAAGCATTCAGGACGCTTACATTAATGCTATTCGGCGGGCTAAGAATTTTATTTATATTGAAAACCAATATTTCCTTGGAAGTTGTTTTGGATGGTCTCCTGATAATATCAAGCCTGAGGATATTGGTGCCTTGCACTGTATCCCAAGAGAGCTTTCCCTCAAGATCGTCAGTAAGATTAAAGCAGGGGAAAGGTTCACTGTCTATGTAGTTGTCCCAATGTGGCCAGAAGGTCTACCAGAAAGTGGATCAGTTCAGGCGATATTAGATTGGCAGAGGAGGACATTTGAAATGATGTATAAAGACGTGATCGAGGCTCTTAGAGATCAAGGTATCGAAGAAGACCCTCGCAACTACTTGACGTTCTTCTGTCTTGGGAACCGGGAAGTCAAGAGGGATGGAGAATATGAACCTTTAGAAGCACCAGAGGAAGATTCTGATTATATGAGAGCCCAGCAGGCCAGGCGTTTCATGATTTATGTTCACACCAAGATGATGATTGTTGATGATGAGTACATAATTGTTGGATCGGCAAATATCAACCAGAGATCCATGGATGGTGCAAGGGACTCTGAGATAGCAATGGGTGCTTATCAGCCATATCATCTGTCAGCCCGTGAACCTGCACGTGGTCAAGTTCACGGATTCCGTATGGCTCTATGGTATGAACATCTTGGTATGCTTGATGAAACTTTCCTTCGTCCAGAAAGTGAAGAATGTGTTGCAAAGGTTAACAGAATTGCTGATAAGTATTGGGATCTGTATTCAAGCGAATCACTCGAGAGAGACTTGCCCGGTCACCTTCTCCGCTATCCAGTTGGCATATCCAGTGAAGGAAAAGTCACAGAACTCCCAGGATTCGAGTTCTTCCCTGACACCAAAGCTCGTATACTCGGAACCAAATCCGACTACCTCCCTCCTATCCTCACTACTTAGTCATTTTTCTGCTGCGTGCAATCTTATTCCAACAGGTTCTTACTACTTACATCTTGTTTTTGTAACTTGAAAAGACGTTTTGAAAGGTTTGAGGTTTACTTAAATAGTGGCTAATGTCACTTTAGCTATGTTTCTTGATTGAGGCTTACTTCAAATACTCTGGCTAATGTAATTTTGGGTTGTGCCTTCTTAGTCTTGGGGGGTTTACTTTTATACAGGCTAATGTAACTTTGGCTGGATTTCTTGATGTTATAAACTTCAGTTTAATTTTCTCGTGGCA 3016 41.61 MEGSSLHGTLHATIYEVDRLHIGGGSNIFSMLKQNFEEAVGIGKGQTKLYATIDLEKARVGRTRILETEPSNPRWYESFHIYCAHKASNVIFTVKDDNPIGATLIGRAYVPVEDILDGEEVDRWVPILDEEKNPIEGESKIHVKLQYFSVTKDRNWGCGIRSRKFPGVPYTYYSQRQGCKVSLYQDAHIPDNFIPKIPLAGGKNYAPARCWEDIFDAIQNAKHVIYITGWSVYTEIALVRDSRRPKPGGDTMLGELLKKKASEGVRVLMLVWDDRTSVGLLKKDGLMATHDEETERYFQNTDVHCVLCPRNPDDGGSIVQDLQISTMFTHHQKIVVVDSPMPSGDSDKRRIVSFVGGIDLCDGRYDTPFHSLFRTLDTAHHDDFHQPNFTGASITKGGPREPWHDIHSRLEGPIAWDVLFNFEQRWKKQGGKDVLVQLRELDEIIIPPSPVMYPDDHDTWNVQLFRSIDGGAAFGFPETPEDAARAGLVSGKDNIIDRSIQDAYINAIRRAKNFIYIENQYFLGSCFGWSPDNIKPEDIGALHCIPRELSLKIVSKIKAGERFTVYVVVPMWPEGLPESGSVQAILDWQRRTFEMMYKDVIEALRDQGIEEDPRNYLTFFCLGNREVKRDGEYEPLEAPEEDSDYMRAQQARRFMIYVHTKMMIVDDEYIIVGSANINQRSMDGARDSEIAMGAYQPYHLSAREPARGQVHGFRMALWYEHLGMLDETFLRPESEECVAKVNRIADKYWDLYSSESLERDLPGHLLRYPVGISSEGKVTELPGFEFFPDTKARILGTKSDYLPPILTT 808
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 528873 533355 - XM_039043300.1 Bhi09g00029 42646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g00029 808 Pfam Phospholipase D C terminal 726 798 IPR024632 -
Bhi09g00029 808 SMART pld_4 654 681 IPR001736 GO:0003824
Bhi09g00029 808 SMART pld_4 326 364 IPR001736 GO:0003824
Bhi09g00029 808 Gene3D Endonuclease Chain A 200 442 - -
Bhi09g00029 808 PANTHER PHOSPHOLIPASE D 6 808 IPR015679 -
Bhi09g00029 808 PANTHER PHOSPHOLIPASE D 6 808 - -
Bhi09g00029 808 CDD C2_plant_PLD 6 148 - -
Bhi09g00029 808 PIRSF PLD_plant 1 808 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Bhi09g00029 808 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 654 681 IPR001736 GO:0003824
Bhi09g00029 808 Pfam Phospholipase D Active site motif 655 681 IPR001736 GO:0003824
Bhi09g00029 808 Pfam Phospholipase D Active site motif 326 364 IPR001736 GO:0003824
Bhi09g00029 808 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 326 364 IPR001736 GO:0003824
Bhi09g00029 808 Gene3D Endonuclease Chain A 480 698 - -
Bhi09g00029 808 Gene3D C2 domain 7 156 IPR035892 -
Bhi09g00029 808 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 5 149 IPR035892 -
Bhi09g00029 808 Pfam C2 domain 36 127 IPR000008 -
Bhi09g00029 808 ProSiteProfiles C2 domain profile. 1 125 IPR000008 -
Bhi09g00029 808 CDD PLDc_pPLDalpha_2 492 701 - -
Bhi09g00029 808 SMART C2_3c 9 124 IPR000008 -
Bhi09g00029 808 SUPERFAMILY Phospholipase D/nuclease 443 738 - -
Bhi09g00029 808 SUPERFAMILY Phospholipase D/nuclease 151 440 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bhi01g03552 Bhi09g00029 CCT
Bhi01g03552 Bhi09g00029 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi01g03551 Bhi-Chr1:90338220 Bhi09g00029 Bhi-Chr9:528873 0 dispersed
Bhi01g03552 Bhi-Chr1:90338220 Bhi09g00029 Bhi-Chr9:528873 0 dispersed
Bhi04g00959 Bhi-Chr4:24175834 Bhi09g00029 Bhi-Chr9:528873 0 dispersed
Bhi04g00960 Bhi-Chr4:24175834 Bhi09g00029 Bhi-Chr9:528873 0 dispersed
Bhi09g00029 Bhi-Chr9:528873 Bhi09g00031 Bhi-Chr9:528873 0 dispersed
Bhi09g00028 Bhi-Chr9:528873 Bhi09g00029 Bhi-Chr9:528873 0 tandem
Bhi09g00029 Bhi-Chr9:528873 Bhi09g00030 Bhi-Chr9:528873 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g00029 K01115 - csv:101206113 1613.59