Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bhi09g00220 AAGCGATTCTCAATACCAACAATTCCTACTCTCCTTTGTACACACTCTCTTCTCCCTCCCTCCATCTCTGCCCTGCTCGCTCGCTCGCTCGCTCGCGATCTCCGTCTCCATCTCCAGCTCGATCGGGACTTCAGGGTTTTGATCGATTTTTGTTTCTTTATTTTGATCCTTCCTGTCTCCTGCTAACAATTCGATCTGCTTTCTTTCCGATCAATTCTCTTCCACAATGCCGTCCGTCTATGGAGCTCGTTTGACCACTTTTGAAGACTCTGAGAAGGAAAGCGAGTATGGATATGTTCGGAAGGTATCTGGACCAGTCGTCGTGGCAGATGGCATGGGAGGTGCAGCCATGTATGAATTGGTTCGTGTTGGTCATGATAATCTGATTGGTGAAATCATTAGGCTAGAAGGAGATTCTGCCACTATTCAGGTTTATGAGGAAACAGCTGGTTTGATGGTGAATGACCCTGTTTTACGTACTCATAAACCTTTGTCAGTGGAGTTAGGACCTGGAATACTGGGAAATATATTTGATGGCATTCAGAGGCCATTGAAAACAATTGCAAAGAGATCAGGAGATGTCTACATTCCTCGTGGTGTCGCTGTCCCGGCACTGGACAAAGACACACCTTGGGATTTTCAACCCAAAAAACTAGGTGAGGGCGACTTATTGACAGGTGGAGACTTGTATGCAACTGTCTTTGAGAATAGTCTAATGGAGCACCATATTGCACTTCCTCCTGATGCTATGGGGAAAATTACCTATATTGCATCACCTGGCCAATATTCATTGAAGGATACTGTTTTAGAGCTCGAGTTTCAAGGAGTTAAAAAGCAATTTACCATGCTTCAGACTTGGCCTGTGCGTACTCCTAGACCAGTTGCGTCAAAGCTTGCAGCTGATACCCCTCTTTTGACTGGGCAGCGTGTTCTTGATGCACTCTTCCCTTCTGTTCTTGGTGGAACATGTGCCATTCCTGGAGCATTTGGTTGTGGAAAAACAGTCATTAGTCAAGCTCTCTCTAAATATTCAAATTCCGACACCGTGGTGTATGTTGGTTGTGGAGAGAGAGGAAATGAAATGGCTGAAGTTCTCATGGATTTTCCTCAATTGACAATGACATTGCCTGATGGGCGTGAAGAATCTGTCATGAAGCGTACCACTCTTGTGGCTAACACTTCCAATATGCCGGTGGCTGCTCGTGAAGCTTCAATTTATACTGGAATTACTTTGGCCGAATACTTCAGAGATATGGGATACAATGTAAGCATGATGGCAGATTCAACATCTCGATGGGCAGAAGCACTTCGGGAAATATCTGGACGACTGGCAGAAATGCCAGCAGATAGTGGATATCCTGCCTACCTAGCTGCACGTTTAGCCTCTTTCTATGAGCGTGCTGGTAAAGTGAAATGTCTTGGTGGGCCAGAACGAACTGGCAGTGTTACCATTGTTGGTGCAGTTTCTCCACCTGGAGGAGATTTCTCTGATCCAGTGACATCTGCTACCCTCAGTATTGTCCAGGTTTTCTGGGGTCTAGATAAGAAGCTTGCCCAGAGGAAGCACTTCCCTTCTGTGAACTGGCTAATTTCATACTCAAAATACTCTTCTGCATTGGAGTCTTTCTACGAGAAGTTTGATCCAGATTTTATTAACATCAGGACGAAGGCCCGTGAAGTTCTTCAGAGGGAAGATGACCTCAATGAAATTGTCCAACTTGTAGGGAAGGATGCCTTGGCCGAAGGAGATAAGATTACCTTAGAGACTGCAAAGCTTTTGAGGGAGGACTATCTTGCTCAGAATGCATTTACTCCGTATGATAAATTCTGCCCCTTCTACAAGTCGGTCTGGATGATGCGTAATATCATTCATTTCTACAATTTGGCTAATCAGGCAGTAGAGAGGGGAGCGGGTATGGATGGCCAAAAGATAACATACAGTTTGATTAAGCATCGGTTGGGAGATCTGTTCTATCGCCTGGTGTCTCAGAAGTTTGAGGATCCGGCTGAAGGAGAAGCAGCTCTGATTGAAAAATTTAAAAAGCTACATGAAGATCTGACAAATGGTTTCCGTGCTCTCGAGGACGAAACACGGTAGATGTAAAAGATTTGCCGACTTTGTGCCATGTCTTGGTGTTTTTTCCTCTGATTTTGTAGAATATTATGATGATGTATTATGTTGGTTTGGGTTGCAGTCGCAACTTTTGGTTAGCTATTATTTAATAATGTGTATTATTTTCCCCCTCAAGCTTTCCGGGTTCGTATTTGGCGTTCAGGACTGAGATTCTTATATTCCCTTATTTAATCTTACAATATCTGTGCAATAAGATGGATCCGAGTTTGTTTTTGGCCGTT 2355 44.12 MPSVYGARLTTFEDSEKESEYGYVRKVSGPVVVADGMGGAAMYELVRVGHDNLIGEIIRLEGDSATIQVYEETAGLMVNDPVLRTHKPLSVELGPGILGNIFDGIQRPLKTIAKRSGDVYIPRGVAVPALDKDTPWDFQPKKLGEGDLLTGGDLYATVFENSLMEHHIALPPDAMGKITYIASPGQYSLKDTVLELEFQGVKKQFTMLQTWPVRTPRPVASKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKYSNSDTVVYVGCGERGNEMAEVLMDFPQLTMTLPDGREESVMKRTTLVANTSNMPVAAREASIYTGITLAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGGPERTGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSSALESFYEKFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVERGAGMDGQKITYSLIKHRLGDLFYRLVSQKFEDPAEGEAALIEKFKKLHEDLTNGFRALEDETR 623
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 4811721 4817700 + XM_039043509.1 Bhi09g00220 42837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bhi09g00220 623 Gene3D - 459 611 IPR024034 -
Bhi09g00220 623 Pfam ATP synthase alpha/beta family, beta-barrel domain 25 85 IPR004100 GO:0046034|GO:1902600
Bhi09g00220 623 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 232 458 IPR000194 GO:0005524
Bhi09g00220 623 Gene3D - 20 89 IPR023366 -
Bhi09g00220 623 Coils Coil 601 621 - -
Bhi09g00220 623 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 202 463 IPR027417 -
Bhi09g00220 623 ProSitePatterns ATP synthase alpha and beta subunits signature. 449 458 IPR020003 GO:0005524
Bhi09g00220 623 Gene3D - 91 457 IPR027417 -
Bhi09g00220 623 Gene3D - 134 205 - -
Bhi09g00220 623 Hamap V-type ATP synthase alpha chain [atpA]. 19 622 IPR022878 GO:0046034|GO:0046961
Bhi09g00220 623 PANTHER V-TYPE PROTON ATPASE CATALYTIC SUBUNIT A 3 622 - -
Bhi09g00220 623 CDD ATP-synt_V_A-type_alpha_C 475 581 - -
Bhi09g00220 623 Pfam ATPsynthase alpha/beta subunit N-term extension 102 223 IPR031686 -
Bhi09g00220 623 SUPERFAMILY C-terminal domain of alpha and beta subunits of F1 ATP synthase 471 553 - -
Bhi09g00220 623 CDD ATP-synt_V_A-type_alpha_N 21 87 - -
Bhi09g00220 623 TIGRFAM V-ATPase_V1_A: V-type ATPase, A subunit 20 611 IPR005725 GO:0033180|GO:0046961|GO:1902600
Bhi09g00220 623 CDD V_A-ATPase_A 88 460 - -
Bhi09g00220 623 SUPERFAMILY N-terminal domain of alpha and beta subunits of F1 ATP synthase 17 89 IPR036121 GO:0046034|GO:1902600
Bhi09g00220 623 PANTHER V-TYPE PROTON ATPASE CATALYTIC SUBUNIT A 3 622 IPR022878 GO:0046034|GO:0046961
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bhi09g00220 Bhi-Chr9:4811721 Bhi09g02768 Bhi-Chr9:73704910 3.62E-22 dispersed
Bhi09g00220 Bhi-Chr9:4811721 Bhi07g01249 Bhi-Chr7:39074486 1.19E-26 transposed
Bhi09g00220 Bhi-Chr9:4811721 Bhi12g00867 Bhi-Chr12:26270005 1.09E-26 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bhi09g00220 K02145 - csv:101216234 1212.98